data_6WGT # _model_server_result.job_id T4Azc_2mHGstJSsGitfK7g _model_server_result.datetime_utc '2024-11-08 20:00:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wgt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1201}' # _entry.id 6WGT # _exptl.entry_id 6WGT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 323.432 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WGT _cell.length_a 81.64 _cell.length_b 175.26 _cell.length_c 280.67 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WGT _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I 1 1 B,J,K,L,M 2 1 C,N,O,P,Q 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 J N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 109 A CYS 148 1_555 A SG CYS 188 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? disulf ? disulf2 A SG CYS 371 A CYS 349 1_555 A SG CYS 375 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf3 B SG CYS 109 B CYS 148 1_555 B SG CYS 188 B CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 B SG CYS 371 B CYS 349 1_555 B SG CYS 375 B CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf5 C SG CYS 371 C CYS 349 1_555 C SG CYS 375 C CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? # _chem_comp.formula 'C20 H25 N3 O' _chem_comp.formula_weight 323.432 _chem_comp.id 7LD _chem_comp.mon_nstd_flag . _chem_comp.name (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Lysergic acid diethylamide' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 N2 7LD sing 38 n n C8 C7 7LD doub 39 n y C8 N1 7LD sing 40 n y C15 C7 7LD sing 41 n n C15 C11 7LD sing 42 n n C7 C3 7LD sing 43 n y N1 C1 7LD sing 44 n y N2 C11 7LD sing 45 n n N2 C13 7LD sing 46 n n C11 C9 7LD sing 47 n n C3 C1 7LD doub 48 n y C3 C6 7LD sing 49 n y C13 C14 7LD sing 50 n n C1 C4 7LD sing 51 n y C9 C6 7LD sing 52 n n C9 C10 7LD doub 53 n n C6 C2 7LD doub 54 n y C4 C5 7LD doub 55 n y C14 C10 7LD sing 56 n n C14 C16 7LD sing 57 n n C17 N3 7LD sing 58 n n C17 C18 7LD sing 59 n n C2 C5 7LD sing 60 n y C16 N3 7LD sing 61 n n C16 O1 7LD doub 62 n n N3 C19 7LD sing 63 n n C20 C19 7LD sing 64 n n N1 H1 7LD sing 65 n n C4 H2 7LD sing 66 n n C5 H3 7LD sing 67 n n C8 H4 7LD sing 68 n n C10 H5 7LD sing 69 n n C13 H6 7LD sing 70 n n C13 H7 7LD sing 71 n n C15 H8 7LD sing 72 n n C15 H9 7LD sing 73 n n C17 H10 7LD sing 74 n n C17 H11 7LD sing 75 n n C20 H12 7LD sing 76 n n C20 H13 7LD sing 77 n n C20 H14 7LD sing 78 n n C12 H16 7LD sing 79 n n C12 H17 7LD sing 80 n n C12 H18 7LD sing 81 n n C11 H19 7LD sing 82 n n C2 H20 7LD sing 83 n n C14 H21 7LD sing 84 n n C19 H22 7LD sing 85 n n C19 H23 7LD sing 86 n n C18 H24 7LD sing 87 n n C18 H25 7LD sing 88 n n C18 H26 7LD sing 89 n n # _atom_sites.entry_id 6WGT _atom_sites.fract_transf_matrix[1][1] 0.012249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005706 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003563 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 7LD A 1 1201 1201 7LD 7LD . E 3 CLR A 1 1202 2 CLR CLR . F 4 OLA A 1 1203 11 OLA OLA . G 4 OLA A 1 1204 14 OLA OLA . H 5 PEG A 1 1205 51 PEG PEG . I 3 CLR A 1 1206 1201 CLR CLR . J 2 7LD B 1 1201 1202 7LD 7LD . K 4 OLA B 1 1202 12 OLA OLA . L 6 PO4 B 1 1203 102 PO4 PO4 . M 6 PO4 B 1 1204 103 PO4 PO4 . N 2 7LD C 1 1201 1203 7LD 7LD . O 5 PEG C 1 1202 52 PEG PEG . P 6 PO4 C 1 1203 101 PO4 PO4 . Q 7 1PE C 1 1204 501 1PE 1PE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 7LD . . . J 2 5.295 6.833 51.626 1 41.21 ? N1 7LD 1201 B 1 HETATM 2 N N3 7LD . . . J 2 7.15 -0.41 57.04 1 64.23 ? N3 7LD 1201 B 1 HETATM 3 C C4 7LD . . . J 2 4.07 6.781 53.889 1 45.89 ? C4 7LD 1201 B 1 HETATM 4 C C5 7LD . . . J 2 3.815 5.978 55.003 1 46.6 ? C5 7LD 1201 B 1 HETATM 5 C C6 7LD . . . J 2 5.144 4.268 53.979 1 46.18 ? C6 7LD 1201 B 1 HETATM 6 C C7 7LD . . . J 2 6.108 4.775 51.827 1 43.33 ? C7 7LD 1201 B 1 HETATM 7 C C8 7LD . . . J 2 6.066 5.899 50.989 1 43.86 ? C8 7LD 1201 B 1 HETATM 8 C C10 7LD . . . J 2 6.982 2.661 54.906 1 43.33 ? C10 7LD 1201 B 1 HETATM 9 C C13 7LD . . . J 2 6.786 0.425 53.812 1 37.65 ? C13 7LD 1201 B 1 HETATM 10 C C15 7LD . . . J 2 6.794 3.417 51.665 1 39.68 ? C15 7LD 1201 B 1 HETATM 11 C C17 7LD . . . J 2 8.322 -1.076 56.463 1 57.35 ? C17 7LD 1201 B 1 HETATM 12 C C20 7LD . . . J 2 6.072 -2.423 58.126 1 43.51 ? C20 7LD 1201 B 1 HETATM 13 N N2 7LD . . . J 2 7.178 1.122 52.784 1 39.19 ? N2 7LD 1201 B 1 HETATM 14 C C12 7LD . . . J 2 7.157 0.363 51.561 1 38.16 ? C12 7LD 1201 B 1 HETATM 15 C C11 7LD . . . J 2 6.166 2.351 52.611 1 39.09 ? C11 7LD 1201 B 1 HETATM 16 C C3 7LD . . . J 2 5.366 5.072 52.916 1 44.32 ? C3 7LD 1201 B 1 HETATM 17 C C1 7LD . . . J 2 4.859 6.312 52.838 1 39.84 ? C1 7LD 1201 B 1 HETATM 18 C C2 7LD . . . J 2 4.354 4.699 55.063 1 44.89 ? C2 7LD 1201 B 1 HETATM 19 C C9 7LD . . . J 2 5.837 2.866 53.891 1 42.2 ? C9 7LD 1201 B 1 HETATM 20 C C14 7LD . . . J 2 7.251 1.31 55.107 1 46.85 ? C14 7LD 1201 B 1 HETATM 21 C C16 7LD . . . J 2 6.566 0.777 56.402 1 57.02 ? C16 7LD 1201 B 1 HETATM 22 O O1 7LD . . . J 2 5.608 1.337 56.86 1 54.55 ? O1 7LD 1201 B 1 HETATM 23 C C19 7LD . . . J 2 6.564 -0.971 58.26 1 62.41 ? C19 7LD 1201 B 1 HETATM 24 C C18 7LD . . . J 2 9.612 -0.259 56.535 1 43.93 ? C18 7LD 1201 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #