data_6WGT # _model_server_result.job_id YZXLiKwLxsz6TM8rgKoVvg _model_server_result.datetime_utc '2024-11-08 19:35:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wgt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1202}' # _entry.id 6WGT # _exptl.entry_id 6WGT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WGT _cell.length_a 81.64 _cell.length_b 175.26 _cell.length_c 280.67 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WGT _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I 1 1 B,J,K,L,M 2 1 C,N,O,P,Q 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 109 A CYS 148 1_555 A SG CYS 188 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? disulf ? disulf2 A SG CYS 371 A CYS 349 1_555 A SG CYS 375 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf3 B SG CYS 109 B CYS 148 1_555 B SG CYS 188 B CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 B SG CYS 371 B CYS 349 1_555 B SG CYS 375 B CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf5 C SG CYS 371 C CYS 349 1_555 C SG CYS 375 C CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 159 n n C1 C10 CLR sing 160 n n C1 H11 CLR sing 161 n n C1 H12 CLR sing 162 n n C2 C3 CLR sing 163 n n C2 H21 CLR sing 164 n n C2 H22 CLR sing 165 n n C3 C4 CLR sing 166 n n C3 O1 CLR sing 167 n n C3 H3 CLR sing 168 n n C4 C5 CLR sing 169 n n C4 H41 CLR sing 170 n n C4 H42 CLR sing 171 n n C5 C6 CLR doub 172 n n C5 C10 CLR sing 173 n n C6 C7 CLR sing 174 n n C6 H6 CLR sing 175 n n C7 C8 CLR sing 176 n n C7 H71 CLR sing 177 n n C7 H72 CLR sing 178 n n C8 C9 CLR sing 179 n n C8 C14 CLR sing 180 n n C8 H8 CLR sing 181 n n C9 C10 CLR sing 182 n n C9 C11 CLR sing 183 n n C9 H9 CLR sing 184 n n C10 C19 CLR sing 185 n n C11 C12 CLR sing 186 n n C11 H111 CLR sing 187 n n C11 H112 CLR sing 188 n n C12 C13 CLR sing 189 n n C12 H121 CLR sing 190 n n C12 H122 CLR sing 191 n n C13 C14 CLR sing 192 n n C13 C17 CLR sing 193 n n C13 C18 CLR sing 194 n n C14 C15 CLR sing 195 n n C14 H14 CLR sing 196 n n C15 C16 CLR sing 197 n n C15 H151 CLR sing 198 n n C15 H152 CLR sing 199 n n C16 C17 CLR sing 200 n n C16 H161 CLR sing 201 n n C16 H162 CLR sing 202 n n C17 C20 CLR sing 203 n n C17 H17 CLR sing 204 n n C18 H181 CLR sing 205 n n C18 H182 CLR sing 206 n n C18 H183 CLR sing 207 n n C19 H191 CLR sing 208 n n C19 H192 CLR sing 209 n n C19 H193 CLR sing 210 n n C20 C21 CLR sing 211 n n C20 C22 CLR sing 212 n n C20 H20 CLR sing 213 n n C21 H211 CLR sing 214 n n C21 H212 CLR sing 215 n n C21 H213 CLR sing 216 n n C22 C23 CLR sing 217 n n C22 H221 CLR sing 218 n n C22 H222 CLR sing 219 n n C23 C24 CLR sing 220 n n C23 H231 CLR sing 221 n n C23 H232 CLR sing 222 n n C24 C25 CLR sing 223 n n C24 H241 CLR sing 224 n n C24 H242 CLR sing 225 n n C25 C26 CLR sing 226 n n C25 C27 CLR sing 227 n n C25 H25 CLR sing 228 n n C26 H261 CLR sing 229 n n C26 H262 CLR sing 230 n n C26 H263 CLR sing 231 n n C27 H271 CLR sing 232 n n C27 H272 CLR sing 233 n n C27 H273 CLR sing 234 n n O1 H1 CLR sing 235 n n # _atom_sites.entry_id 6WGT _atom_sites.fract_transf_matrix[1][1] 0.012249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005706 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003563 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 7LD A 1 1201 1201 7LD 7LD . E 3 CLR A 1 1202 2 CLR CLR . F 4 OLA A 1 1203 11 OLA OLA . G 4 OLA A 1 1204 14 OLA OLA . H 5 PEG A 1 1205 51 PEG PEG . I 3 CLR A 1 1206 1201 CLR CLR . J 2 7LD B 1 1201 1202 7LD 7LD . K 4 OLA B 1 1202 12 OLA OLA . L 6 PO4 B 1 1203 102 PO4 PO4 . M 6 PO4 B 1 1204 103 PO4 PO4 . N 2 7LD C 1 1201 1203 7LD 7LD . O 5 PEG C 1 1202 52 PEG PEG . P 6 PO4 C 1 1203 101 PO4 PO4 . Q 7 1PE C 1 1204 501 1PE 1PE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . E 3 8.53 47.508 62.056 1 62.03 ? C1 CLR 1202 A 1 HETATM 2 C C2 CLR . . . E 3 8.429 47.09 63.527 1 55.07 ? C2 CLR 1202 A 1 HETATM 3 C C3 CLR . . . E 3 7.391 45.984 63.732 1 59.13 ? C3 CLR 1202 A 1 HETATM 4 C C4 CLR . . . E 3 7.751 44.74 62.923 1 54.81 ? C4 CLR 1202 A 1 HETATM 5 C C5 CLR . . . E 3 8.053 45.124 61.489 1 64.4 ? C5 CLR 1202 A 1 HETATM 6 C C6 CLR . . . E 3 7.543 44.352 60.52 1 63.66 ? C6 CLR 1202 A 1 HETATM 7 C C7 CLR . . . E 3 7.931 44.526 59.075 1 58.67 ? C7 CLR 1202 A 1 HETATM 8 C C8 CLR . . . E 3 9.171 45.384 58.902 1 54.33 ? C8 CLR 1202 A 1 HETATM 9 C C9 CLR . . . E 3 9.048 46.658 59.713 1 53.44 ? C9 CLR 1202 A 1 HETATM 10 C C10 CLR . . . E 3 8.963 46.311 61.203 1 59.24 ? C10 CLR 1202 A 1 HETATM 11 C C11 CLR . . . E 3 10.186 47.608 59.32 1 50.98 ? C11 CLR 1202 A 1 HETATM 12 C C12 CLR . . . E 3 10.143 48.003 57.831 1 52.66 ? C12 CLR 1202 A 1 HETATM 13 C C13 CLR . . . E 3 10.19 46.754 56.952 1 51.7 ? C13 CLR 1202 A 1 HETATM 14 C C14 CLR . . . E 3 9.105 45.811 57.454 1 60.87 ? C14 CLR 1202 A 1 HETATM 15 C C15 CLR . . . E 3 8.89 44.717 56.408 1 59.04 ? C15 CLR 1202 A 1 HETATM 16 C C16 CLR . . . E 3 8.973 45.521 55.122 1 53.72 ? C16 CLR 1202 A 1 HETATM 17 C C17 CLR . . . E 3 9.731 46.822 55.472 1 57.22 ? C17 CLR 1202 A 1 HETATM 18 C C18 CLR . . . E 3 11.577 46.178 57.112 1 43.63 ? C18 CLR 1202 A 1 HETATM 19 C C19 CLR . . . E 3 10.293 45.776 61.662 1 53.68 ? C19 CLR 1202 A 1 HETATM 20 C C20 CLR . . . E 3 10.729 47.101 54.353 1 47.81 ? C20 CLR 1202 A 1 HETATM 21 C C21 CLR . . . E 3 10.264 48.36 53.616 1 51.84 ? C21 CLR 1202 A 1 HETATM 22 C C22 CLR . . . E 3 10.84 45.868 53.441 1 37.7 ? C22 CLR 1202 A 1 HETATM 23 C C23 CLR . . . E 3 10.504 46.102 51.974 1 32.97 ? C23 CLR 1202 A 1 HETATM 24 C C24 CLR . . . E 3 10.567 44.749 51.275 1 29.91 ? C24 CLR 1202 A 1 HETATM 25 C C25 CLR . . . E 3 10.629 44.825 49.745 1 23.57 ? C25 CLR 1202 A 1 HETATM 26 C C26 CLR . . . E 3 10.132 43.519 49.144 1 24.02 ? C26 CLR 1202 A 1 HETATM 27 C C27 CLR . . . E 3 9.839 45.98 49.152 1 19.04 ? C27 CLR 1202 A 1 HETATM 28 O O1 CLR . . . E 3 7.329 45.624 65.113 1 62.15 ? O1 CLR 1202 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 28 #