data_6WGT
#
_model_server_result.job_id            Fc5Qx3_DNbwy5793N93wdg 
_model_server_result.datetime_utc      '2024-12-02 10:09:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wgt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":1202}' 
#
_entry.id    6WGT 
#
_exptl.entry_id    6WGT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6WGT 
_cell.length_a            81.64 
_cell.length_b            175.26 
_cell.length_c            280.67 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WGT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    'C 2c 2' 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,I 1 1 
B,J,K,L,M 2 1 
C,N,O,P,Q 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 109 A CYS 148 1_555 A SG CYS 188 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? 
disulf ? disulf2 A SG CYS 371 A CYS 349 1_555 A SG CYS 375 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf3 B SG CYS 109 B CYS 148 1_555 B SG CYS 188 B CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 B SG CYS 371 B CYS 349 1_555 B SG CYS 375 B CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf5 C SG CYS 371 C CYS 349 1_555 C SG CYS 375 C CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 454 n n 
C1 C2 PEG sing 455 n n 
C1 H11 PEG sing 456 n n 
C1 H12 PEG sing 457 n n 
O1 HO1 PEG sing 458 n n 
C2 O2 PEG sing 459 n n 
C2 H21 PEG sing 460 n n 
C2 H22 PEG sing 461 n n 
O2 C3 PEG sing 462 n n 
C3 C4 PEG sing 463 n n 
C3 H31 PEG sing 464 n n 
C3 H32 PEG sing 465 n n 
C4 O4 PEG sing 466 n n 
C4 H41 PEG sing 467 n n 
C4 H42 PEG sing 468 n n 
O4 HO4 PEG sing 469 n n 
#
_atom_sites.entry_id                     6WGT 
_atom_sites.fract_transf_matrix[1][1]    0.012249 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005706 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003563 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 7LD A 1 1201 1201 7LD 7LD . 
E 3 CLR A 1 1202 2 CLR CLR . 
F 4 OLA A 1 1203 11 OLA OLA . 
G 4 OLA A 1 1204 14 OLA OLA . 
H 5 PEG A 1 1205 51 PEG PEG . 
I 3 CLR A 1 1206 1201 CLR CLR . 
J 2 7LD B 1 1201 1202 7LD 7LD . 
K 4 OLA B 1 1202 12 OLA OLA . 
L 6 PO4 B 1 1203 102 PO4 PO4 . 
M 6 PO4 B 1 1204 103 PO4 PO4 . 
N 2 7LD C 1 1201 1203 7LD 7LD . 
O 5 PEG C 1 1202 52 PEG PEG . 
P 6 PO4 C 1 1203 101 PO4 PO4 . 
Q 7 1PE C 1 1204 501 1PE 1PE . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . O 5 15.419 -41.643 -1.216 1 32.25 ? C1 PEG 1202 C 1 
HETATM 2 O O1 PEG . . . O 5 14.421 -41.368 -2.19 1 29.42 ? O1 PEG 1202 C 1 
HETATM 3 C C2 PEG . . . O 5 15.607 -43.131 -1.046 1 41.68 ? C2 PEG 1202 C 1 
HETATM 4 O O2 PEG . . . O 5 16.508 -43.4 0.019 1 35.37 ? O2 PEG 1202 C 1 
HETATM 5 C C3 PEG . . . O 5 16.726 -44.779 0.255 1 32.76 ? C3 PEG 1202 C 1 
HETATM 6 C C4 PEG . . . O 5 18.187 -44.994 0.429 1 38.38 ? C4 PEG 1202 C 1 
HETATM 7 O O4 PEG . . . O 5 18.487 -46.164 1.161 1 48.2 ? O4 PEG 1202 C 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           7 
#