data_6WGX # _model_server_result.job_id GcQsPTlMSboGiLn2LHFgXQ _model_server_result.datetime_utc '2024-10-19 03:45:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wgx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":203}' # _entry.id 6WGX # _exptl.entry_id 6WGX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WGX _cell.length_a 41.909 _cell.length_b 59.198 _cell.length_c 112.604 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WGX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,J 1 1 B,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6WGX _atom_sites.fract_transf_matrix[1][1] 0.023861 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016892 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008881 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 201 170 EDO EDO . D 3 U0D A 1 202 201 U0D LIG . E 2 EDO A 1 203 301 EDO EDO . F 2 EDO A 1 204 401 EDO EDO . G 2 EDO A 1 205 501 EDO EDO . H 2 EDO B 1 201 170 EDO EDO . I 3 U0D B 1 202 201 U0D LIG . J 4 HOH A 1 301 307 HOH HOH . J 4 HOH A 2 302 234 HOH HOH . J 4 HOH A 3 303 86 HOH HOH . J 4 HOH A 4 304 306 HOH HOH . J 4 HOH A 5 305 185 HOH HOH . J 4 HOH A 6 306 206 HOH HOH . J 4 HOH A 7 307 76 HOH HOH . J 4 HOH A 8 308 97 HOH HOH . J 4 HOH A 9 309 152 HOH HOH . J 4 HOH A 10 310 160 HOH HOH . J 4 HOH A 11 311 243 HOH HOH . J 4 HOH A 12 312 105 HOH HOH . J 4 HOH A 13 313 287 HOH HOH . J 4 HOH A 14 314 265 HOH HOH . J 4 HOH A 15 315 224 HOH HOH . J 4 HOH A 16 316 298 HOH HOH . J 4 HOH A 17 317 90 HOH HOH . J 4 HOH A 18 318 240 HOH HOH . J 4 HOH A 19 319 129 HOH HOH . J 4 HOH A 20 320 264 HOH HOH . J 4 HOH A 21 321 210 HOH HOH . J 4 HOH A 22 322 2 HOH HOH . J 4 HOH A 23 323 174 HOH HOH . J 4 HOH A 24 324 14 HOH HOH . J 4 HOH A 25 325 68 HOH HOH . J 4 HOH A 26 326 98 HOH HOH . J 4 HOH A 27 327 196 HOH HOH . J 4 HOH A 28 328 83 HOH HOH . J 4 HOH A 29 329 125 HOH HOH . J 4 HOH A 30 330 205 HOH HOH . J 4 HOH A 31 331 256 HOH HOH . J 4 HOH A 32 332 115 HOH HOH . J 4 HOH A 33 333 119 HOH HOH . J 4 HOH A 34 334 6 HOH HOH . J 4 HOH A 35 335 67 HOH HOH . J 4 HOH A 36 336 37 HOH HOH . J 4 HOH A 37 337 78 HOH HOH . J 4 HOH A 38 338 33 HOH HOH . J 4 HOH A 39 339 162 HOH HOH . J 4 HOH A 40 340 290 HOH HOH . J 4 HOH A 41 341 8 HOH HOH . J 4 HOH A 42 342 66 HOH HOH . J 4 HOH A 43 343 17 HOH HOH . J 4 HOH A 44 344 104 HOH HOH . J 4 HOH A 45 345 64 HOH HOH . J 4 HOH A 46 346 254 HOH HOH . J 4 HOH A 47 347 260 HOH HOH . J 4 HOH A 48 348 54 HOH HOH . J 4 HOH A 49 349 102 HOH HOH . J 4 HOH A 50 350 112 HOH HOH . J 4 HOH A 51 351 56 HOH HOH . J 4 HOH A 52 352 275 HOH HOH . J 4 HOH A 53 353 229 HOH HOH . J 4 HOH A 54 354 87 HOH HOH . J 4 HOH A 55 355 48 HOH HOH . J 4 HOH A 56 356 180 HOH HOH . J 4 HOH A 57 357 21 HOH HOH . J 4 HOH A 58 358 24 HOH HOH . J 4 HOH A 59 359 155 HOH HOH . J 4 HOH A 60 360 57 HOH HOH . J 4 HOH A 61 361 55 HOH HOH . J 4 HOH A 62 362 132 HOH HOH . J 4 HOH A 63 363 200 HOH HOH . J 4 HOH A 64 364 16 HOH HOH . J 4 HOH A 65 365 92 HOH HOH . J 4 HOH A 66 366 198 HOH HOH . J 4 HOH A 67 367 79 HOH HOH . J 4 HOH A 68 368 239 HOH HOH . J 4 HOH A 69 369 282 HOH HOH . J 4 HOH A 70 370 176 HOH HOH . J 4 HOH A 71 371 22 HOH HOH . J 4 HOH A 72 372 94 HOH HOH . J 4 HOH A 73 373 117 HOH HOH . J 4 HOH A 74 374 40 HOH HOH . J 4 HOH A 75 375 30 HOH HOH . J 4 HOH A 76 376 88 HOH HOH . J 4 HOH A 77 377 283 HOH HOH . J 4 HOH A 78 378 11 HOH HOH . J 4 HOH A 79 379 211 HOH HOH . J 4 HOH A 80 380 146 HOH HOH . J 4 HOH A 81 381 253 HOH HOH . J 4 HOH A 82 382 218 HOH HOH . J 4 HOH A 83 383 42 HOH HOH . J 4 HOH A 84 384 32 HOH HOH . J 4 HOH A 85 385 121 HOH HOH . J 4 HOH A 86 386 269 HOH HOH . J 4 HOH A 87 387 169 HOH HOH . J 4 HOH A 88 388 44 HOH HOH . J 4 HOH A 89 389 172 HOH HOH . J 4 HOH A 90 390 237 HOH HOH . J 4 HOH A 91 391 38 HOH HOH . J 4 HOH A 92 392 158 HOH HOH . J 4 HOH A 93 393 99 HOH HOH . J 4 HOH A 94 394 259 HOH HOH . J 4 HOH A 95 395 93 HOH HOH . J 4 HOH A 96 396 116 HOH HOH . J 4 HOH A 97 397 118 HOH HOH . J 4 HOH A 98 398 120 HOH HOH . J 4 HOH A 99 399 84 HOH HOH . J 4 HOH A 100 400 268 HOH HOH . J 4 HOH A 101 401 144 HOH HOH . J 4 HOH A 102 402 272 HOH HOH . J 4 HOH A 103 403 284 HOH HOH . J 4 HOH A 104 404 29 HOH HOH . J 4 HOH A 105 405 137 HOH HOH . J 4 HOH A 106 406 309 HOH HOH . J 4 HOH A 107 407 150 HOH HOH . J 4 HOH A 108 408 285 HOH HOH . J 4 HOH A 109 409 294 HOH HOH . J 4 HOH A 110 410 286 HOH HOH . J 4 HOH A 111 411 71 HOH HOH . J 4 HOH A 112 412 299 HOH HOH . J 4 HOH A 113 413 207 HOH HOH . J 4 HOH A 114 414 303 HOH HOH . J 4 HOH A 115 415 292 HOH HOH . J 4 HOH A 116 416 70 HOH HOH . J 4 HOH A 117 417 167 HOH HOH . J 4 HOH A 118 418 165 HOH HOH . J 4 HOH A 119 419 293 HOH HOH . J 4 HOH A 120 420 217 HOH HOH . J 4 HOH A 121 421 262 HOH HOH . J 4 HOH A 122 422 145 HOH HOH . J 4 HOH A 123 423 295 HOH HOH . J 4 HOH A 124 424 139 HOH HOH . J 4 HOH A 125 425 36 HOH HOH . J 4 HOH A 126 426 252 HOH HOH . J 4 HOH A 127 427 201 HOH HOH . J 4 HOH A 128 428 175 HOH HOH . J 4 HOH A 129 429 63 HOH HOH . J 4 HOH A 130 430 95 HOH HOH . J 4 HOH A 131 431 178 HOH HOH . J 4 HOH A 132 432 215 HOH HOH . J 4 HOH A 133 433 159 HOH HOH . J 4 HOH A 134 434 72 HOH HOH . J 4 HOH A 135 435 225 HOH HOH . J 4 HOH A 136 436 220 HOH HOH . J 4 HOH A 137 437 157 HOH HOH . J 4 HOH A 138 438 135 HOH HOH . J 4 HOH A 139 439 168 HOH HOH . J 4 HOH A 140 440 203 HOH HOH . J 4 HOH A 141 441 278 HOH HOH . J 4 HOH A 142 442 273 HOH HOH . J 4 HOH A 143 443 170 HOH HOH . K 4 HOH B 1 301 194 HOH HOH . K 4 HOH B 2 302 281 HOH HOH . K 4 HOH B 3 303 208 HOH HOH . K 4 HOH B 4 304 227 HOH HOH . K 4 HOH B 5 305 75 HOH HOH . K 4 HOH B 6 306 156 HOH HOH . K 4 HOH B 7 307 267 HOH HOH . K 4 HOH B 8 308 236 HOH HOH . K 4 HOH B 9 309 108 HOH HOH . K 4 HOH B 10 310 177 HOH HOH . K 4 HOH B 11 311 247 HOH HOH . K 4 HOH B 12 312 28 HOH HOH . K 4 HOH B 13 313 181 HOH HOH . K 4 HOH B 14 314 197 HOH HOH . K 4 HOH B 15 315 249 HOH HOH . K 4 HOH B 16 316 149 HOH HOH . K 4 HOH B 17 317 233 HOH HOH . K 4 HOH B 18 318 43 HOH HOH . K 4 HOH B 19 319 161 HOH HOH . K 4 HOH B 20 320 18 HOH HOH . K 4 HOH B 21 321 232 HOH HOH . K 4 HOH B 22 322 20 HOH HOH . K 4 HOH B 23 323 154 HOH HOH . K 4 HOH B 24 324 213 HOH HOH . K 4 HOH B 25 325 124 HOH HOH . K 4 HOH B 26 326 291 HOH HOH . K 4 HOH B 27 327 266 HOH HOH . K 4 HOH B 28 328 26 HOH HOH . K 4 HOH B 29 329 184 HOH HOH . K 4 HOH B 30 330 221 HOH HOH . K 4 HOH B 31 331 246 HOH HOH . K 4 HOH B 32 332 10 HOH HOH . K 4 HOH B 33 333 35 HOH HOH . K 4 HOH B 34 334 65 HOH HOH . K 4 HOH B 35 335 9 HOH HOH . K 4 HOH B 36 336 133 HOH HOH . K 4 HOH B 37 337 188 HOH HOH . K 4 HOH B 38 338 45 HOH HOH . K 4 HOH B 39 339 1 HOH HOH . K 4 HOH B 40 340 214 HOH HOH . K 4 HOH B 41 341 216 HOH HOH . K 4 HOH B 42 342 109 HOH HOH . K 4 HOH B 43 343 85 HOH HOH . K 4 HOH B 44 344 5 HOH HOH . K 4 HOH B 45 345 244 HOH HOH . K 4 HOH B 46 346 123 HOH HOH . K 4 HOH B 47 347 192 HOH HOH . K 4 HOH B 48 348 31 HOH HOH . K 4 HOH B 49 349 60 HOH HOH . K 4 HOH B 50 350 46 HOH HOH . K 4 HOH B 51 351 106 HOH HOH . K 4 HOH B 52 352 241 HOH HOH . K 4 HOH B 53 353 77 HOH HOH . K 4 HOH B 54 354 223 HOH HOH . K 4 HOH B 55 355 3 HOH HOH . K 4 HOH B 56 356 182 HOH HOH . K 4 HOH B 57 357 41 HOH HOH . K 4 HOH B 58 358 100 HOH HOH . K 4 HOH B 59 359 128 HOH HOH . K 4 HOH B 60 360 134 HOH HOH . K 4 HOH B 61 361 250 HOH HOH . K 4 HOH B 62 362 301 HOH HOH . K 4 HOH B 63 363 163 HOH HOH . K 4 HOH B 64 364 51 HOH HOH . K 4 HOH B 65 365 171 HOH HOH . K 4 HOH B 66 366 82 HOH HOH . K 4 HOH B 67 367 166 HOH HOH . K 4 HOH B 68 368 7 HOH HOH . K 4 HOH B 69 369 204 HOH HOH . K 4 HOH B 70 370 130 HOH HOH . K 4 HOH B 71 371 4 HOH HOH . K 4 HOH B 72 372 74 HOH HOH . K 4 HOH B 73 373 89 HOH HOH . K 4 HOH B 74 374 110 HOH HOH . K 4 HOH B 75 375 13 HOH HOH . K 4 HOH B 76 376 242 HOH HOH . K 4 HOH B 77 377 212 HOH HOH . K 4 HOH B 78 378 34 HOH HOH . K 4 HOH B 79 379 228 HOH HOH . K 4 HOH B 80 380 69 HOH HOH . K 4 HOH B 81 381 202 HOH HOH . K 4 HOH B 82 382 138 HOH HOH . K 4 HOH B 83 383 288 HOH HOH . K 4 HOH B 84 384 53 HOH HOH . K 4 HOH B 85 385 107 HOH HOH . K 4 HOH B 86 386 279 HOH HOH . K 4 HOH B 87 387 248 HOH HOH . K 4 HOH B 88 388 111 HOH HOH . K 4 HOH B 89 389 222 HOH HOH . K 4 HOH B 90 390 25 HOH HOH . K 4 HOH B 91 391 49 HOH HOH . K 4 HOH B 92 392 195 HOH HOH . K 4 HOH B 93 393 39 HOH HOH . K 4 HOH B 94 394 140 HOH HOH . K 4 HOH B 95 395 80 HOH HOH . K 4 HOH B 96 396 257 HOH HOH . K 4 HOH B 97 397 235 HOH HOH . K 4 HOH B 98 398 19 HOH HOH . K 4 HOH B 99 399 308 HOH HOH . K 4 HOH B 100 400 126 HOH HOH . K 4 HOH B 101 401 15 HOH HOH . K 4 HOH B 102 402 73 HOH HOH . K 4 HOH B 103 403 127 HOH HOH . K 4 HOH B 104 404 91 HOH HOH . K 4 HOH B 105 405 230 HOH HOH . K 4 HOH B 106 406 50 HOH HOH . K 4 HOH B 107 407 62 HOH HOH . K 4 HOH B 108 408 255 HOH HOH . K 4 HOH B 109 409 52 HOH HOH . K 4 HOH B 110 410 103 HOH HOH . K 4 HOH B 111 411 304 HOH HOH . K 4 HOH B 112 412 271 HOH HOH . K 4 HOH B 113 413 58 HOH HOH . K 4 HOH B 114 414 101 HOH HOH . K 4 HOH B 115 415 136 HOH HOH . K 4 HOH B 116 416 302 HOH HOH . K 4 HOH B 117 417 143 HOH HOH . K 4 HOH B 118 418 47 HOH HOH . K 4 HOH B 119 419 193 HOH HOH . K 4 HOH B 120 420 23 HOH HOH . K 4 HOH B 121 421 274 HOH HOH . K 4 HOH B 122 422 305 HOH HOH . K 4 HOH B 123 423 209 HOH HOH . K 4 HOH B 124 424 96 HOH HOH . K 4 HOH B 125 425 300 HOH HOH . K 4 HOH B 126 426 219 HOH HOH . K 4 HOH B 127 427 147 HOH HOH . K 4 HOH B 128 428 131 HOH HOH . K 4 HOH B 129 429 59 HOH HOH . K 4 HOH B 130 430 164 HOH HOH . K 4 HOH B 131 431 296 HOH HOH . K 4 HOH B 132 432 114 HOH HOH . K 4 HOH B 133 433 179 HOH HOH . K 4 HOH B 134 434 148 HOH HOH . K 4 HOH B 135 435 251 HOH HOH . K 4 HOH B 136 436 270 HOH HOH . K 4 HOH B 137 437 245 HOH HOH . K 4 HOH B 138 438 190 HOH HOH . K 4 HOH B 139 439 12 HOH HOH . K 4 HOH B 140 440 226 HOH HOH . K 4 HOH B 141 441 173 HOH HOH . K 4 HOH B 142 442 61 HOH HOH . K 4 HOH B 143 443 276 HOH HOH . K 4 HOH B 144 444 141 HOH HOH . K 4 HOH B 145 445 186 HOH HOH . K 4 HOH B 146 446 277 HOH HOH . K 4 HOH B 147 447 199 HOH HOH . K 4 HOH B 148 448 187 HOH HOH . K 4 HOH B 149 449 183 HOH HOH . K 4 HOH B 150 450 258 HOH HOH . K 4 HOH B 151 451 27 HOH HOH . K 4 HOH B 152 452 122 HOH HOH . K 4 HOH B 153 453 81 HOH HOH . K 4 HOH B 154 454 280 HOH HOH . K 4 HOH B 155 455 151 HOH HOH . K 4 HOH B 156 456 263 HOH HOH . K 4 HOH B 157 457 238 HOH HOH . K 4 HOH B 158 458 289 HOH HOH . K 4 HOH B 159 459 153 HOH HOH . K 4 HOH B 160 460 142 HOH HOH . K 4 HOH B 161 461 261 HOH HOH . K 4 HOH B 162 462 113 HOH HOH . K 4 HOH B 163 463 191 HOH HOH . K 4 HOH B 164 464 189 HOH HOH . K 4 HOH B 165 465 297 HOH HOH . K 4 HOH B 166 466 231 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 2 -1.045 -0.748 -27.688 1 56.82 ? C1 EDO 203 A 1 HETATM 2 O O1 EDO . . . E 2 -1.832 -1.763 -27.052 1 57.09 ? O1 EDO 203 A 1 HETATM 3 C C2 EDO . . . E 2 0.19 -1.39 -28.303 1 56.94 ? C2 EDO 203 A 1 HETATM 4 O O2 EDO . . . E 2 1.12 -0.39 -28.727 1 57.23 ? O2 EDO 203 A 1 HETATM 5 H H11 EDO . . . E 2 -1.633 -0.251 -28.462 1 68.19 ? H11 EDO 203 A 1 HETATM 6 H H12 EDO . . . E 2 -0.748 0.007 -26.956 1 68.19 ? H12 EDO 203 A 1 HETATM 7 H HO1 EDO . . . E 2 -2.769 -1.533 -27.116 0.97 68.51 ? HO1 EDO 203 A 1 HETATM 8 H H21 EDO . . . E 2 -0.104 -2.002 -29.159 1 68.33 ? H21 EDO 203 A 1 HETATM 9 H H22 EDO . . . E 2 0.666 -2.045 -27.57 0.45 68.33 ? H22 EDO 203 A 1 HETATM 10 H HO2 EDO . . . E 2 1.889 -0.814 -29.131 1 68.68 ? HO2 EDO 203 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #