data_6WH4 # _model_server_result.job_id xKRadZz2rHFRfJQ7m482kQ _model_server_result.datetime_utc '2024-11-24 09:01:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wh4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":1207}' # _entry.id 6WH4 # _exptl.entry_id 6WH4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WH4 _cell.length_a 82.38 _cell.length_b 177.31 _cell.length_c 280.59 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WH4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H 1 1 B,I,J,K 2 1 C,L,M,N,O,P,Q,R 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id R _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 109 A CYS 148 1_555 A SG CYS 188 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? disulf ? disulf2 A SG CYS 371 A CYS 349 1_555 A SG CYS 375 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 B SG CYS 109 B CYS 148 1_555 B SG CYS 188 B CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf4 B SG CYS 371 B CYS 349 1_555 B SG CYS 375 B CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf5 C SG CYS 109 C CYS 148 1_555 C SG CYS 188 C CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf6 C SG CYS 371 C CYS 349 1_555 C SG CYS 375 C CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 6WH4 _atom_sites.fract_transf_matrix[1][1] 0.012139 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00564 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003564 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 89F A 1 1201 11 89F 89F . E 3 OLA A 1 1202 111 OLA OLA . F 3 OLA A 1 1203 211 OLA OLA . G 4 CLR A 1 1204 1301 CLR CLR . H 5 PEG A 1 1205 1401 PEG PEG . I 2 89F B 1 1201 12 89F 89F . J 5 PEG B 1 1202 711 PEG PEG . K 3 OLA B 1 1203 1011 OLA OLA . L 2 89F C 1 1201 13 89F 89F . M 4 CLR C 1 1202 1711 CLR CLR . N 5 PEG C 1 1203 1811 PEG PEG . O 5 PEG C 1 1204 1911 PEG PEG . P 6 NDS C 1 1205 2111 NDS NDS . Q 3 OLA C 1 1206 2211 OLA OLA . R 7 1PE C 1 1207 2411 1PE 1PE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . R 7 19.1 -39.937 63.878 1 37.5 ? OH2 1PE 1207 C 1 HETATM 2 C C12 1PE . . . R 7 19.034 -40.73 62.689 1 39.6 ? C12 1PE 1207 C 1 HETATM 3 C C22 1PE . . . R 7 20.292 -40.524 61.856 1 41.19 ? C22 1PE 1207 C 1 HETATM 4 O OH3 1PE . . . R 7 21.394 -41.253 62.392 1 42.05 ? OH3 1PE 1207 C 1 HETATM 5 C C13 1PE . . . R 7 22.907 -43.083 61.888 1 42.57 ? C13 1PE 1207 C 1 HETATM 6 C C23 1PE . . . R 7 21.565 -42.429 61.612 1 42.39 ? C23 1PE 1207 C 1 HETATM 7 O OH4 1PE . . . R 7 22.954 -43.588 63.218 1 47.55 ? OH4 1PE 1207 C 1 HETATM 8 C C14 1PE . . . R 7 23.947 -45.325 64.663 1 44.02 ? C14 1PE 1207 C 1 HETATM 9 C C24 1PE . . . R 7 23.99 -44.57 63.332 1 47.52 ? C24 1PE 1207 C 1 HETATM 10 O OH5 1PE . . . R 7 24.846 -44.744 65.609 1 48.4 ? OH5 1PE 1207 C 1 HETATM 11 C C15 1PE . . . R 7 27.008 -43.66 65.983 1 61.08 ? C15 1PE 1207 C 1 HETATM 12 C C25 1PE . . . R 7 25.953 -44.108 64.974 1 55.3 ? C25 1PE 1207 C 1 HETATM 13 O OH6 1PE . . . R 7 28.26 -43.511 65.301 1 68.91 ? OH6 1PE 1207 C 1 HETATM 14 C C16 1PE . . . R 7 28.843 -45.868 65.696 1 80.44 ? C16 1PE 1207 C 1 HETATM 15 C C26 1PE . . . R 7 29.252 -44.386 65.851 1 73.01 ? C26 1PE 1207 C 1 HETATM 16 O OH7 1PE . . . R 7 28.898 -46.39 64.346 1 68.38 ? OH7 1PE 1207 C 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #