data_6WH6 # _model_server_result.job_id 3wDPvN1rT69XadaPAlT87w _model_server_result.datetime_utc '2024-11-23 23:18:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wh6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":502}' # _entry.id 6WH6 # _exptl.entry_id 6WH6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 26.017 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CYANIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WH6 _cell.length_a 78.393 _cell.length_b 111.746 _cell.length_c 134.046 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WH6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 160 A LYS 200 1_555 A N CSS 161 A CSS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C CSS 161 A CSS 201 1_555 A N ALA 162 A ALA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A SD CSS 161 A CSS 201 1_555 D N CYN . A CYN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.643 ? covale ? covale4 A SG CYS 339 A CYS 379 1_555 D C CYN . A CYN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.769 ? covale ? covale5 B C LYS 160 B LYS 200 1_555 B N CSS 161 B CSS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 B C CSS 161 B CSS 201 1_555 B N ALA 162 B ALA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 B SD CSS 161 B CSS 201 1_555 H N CYN . B CYN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.639 ? covale ? covale8 B SG CYS 339 B CYS 379 1_555 H C CYN . B CYN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.768 ? # _chem_comp.formula 'C N -1' _chem_comp.formula_weight 26.017 _chem_comp.id CYN _chem_comp.mon_nstd_flag . _chem_comp.name 'CYANIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 C _chem_comp_bond.atom_id_2 N _chem_comp_bond.comp_id CYN _chem_comp_bond.value_order trip _chem_comp_bond.pdbx_ordinal 84 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 6WH6 _atom_sites.fract_transf_matrix[1][1] 0.012756 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008949 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00746 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 1 FAD FAD . D 3 CYN A 1 502 1 CYN CYN . E 4 UQ1 A 1 503 1 UQ1 UQ1 . F 4 UQ1 A 1 504 3 UQ1 UQ1 . G 2 FAD B 1 501 2 FAD FAD . H 3 CYN B 1 502 2 CYN CYN . I 4 UQ1 B 1 503 4 UQ1 UQ1 . J 5 HOH A 1 601 106 HOH HOH . J 5 HOH A 2 602 105 HOH HOH . J 5 HOH A 3 603 108 HOH HOH . J 5 HOH A 4 604 107 HOH HOH . J 5 HOH A 5 605 96 HOH HOH . J 5 HOH A 6 606 33 HOH HOH . J 5 HOH A 7 607 109 HOH HOH . J 5 HOH A 8 608 103 HOH HOH . J 5 HOH A 9 609 3 HOH HOH . J 5 HOH A 10 610 48 HOH HOH . J 5 HOH A 11 611 70 HOH HOH . J 5 HOH A 12 612 69 HOH HOH . J 5 HOH A 13 613 17 HOH HOH . J 5 HOH A 14 614 72 HOH HOH . J 5 HOH A 15 615 30 HOH HOH . J 5 HOH A 16 616 2 HOH HOH . J 5 HOH A 17 617 14 HOH HOH . J 5 HOH A 18 618 39 HOH HOH . J 5 HOH A 19 619 6 HOH HOH . J 5 HOH A 20 620 19 HOH HOH . J 5 HOH A 21 621 79 HOH HOH . J 5 HOH A 22 622 112 HOH HOH . J 5 HOH A 23 623 67 HOH HOH . J 5 HOH A 24 624 50 HOH HOH . J 5 HOH A 25 625 35 HOH HOH . J 5 HOH A 26 626 104 HOH HOH . J 5 HOH A 27 627 27 HOH HOH . J 5 HOH A 28 628 16 HOH HOH . J 5 HOH A 29 629 74 HOH HOH . J 5 HOH A 30 630 13 HOH HOH . J 5 HOH A 31 631 113 HOH HOH . J 5 HOH A 32 632 86 HOH HOH . J 5 HOH A 33 633 61 HOH HOH . J 5 HOH A 34 634 52 HOH HOH . J 5 HOH A 35 635 15 HOH HOH . J 5 HOH A 36 636 98 HOH HOH . J 5 HOH A 37 637 38 HOH HOH . J 5 HOH A 38 638 41 HOH HOH . J 5 HOH A 39 639 99 HOH HOH . J 5 HOH A 40 640 51 HOH HOH . J 5 HOH A 41 641 57 HOH HOH . J 5 HOH A 42 642 101 HOH HOH . J 5 HOH A 43 643 7 HOH HOH . J 5 HOH A 44 644 114 HOH HOH . J 5 HOH A 45 645 29 HOH HOH . J 5 HOH A 46 646 18 HOH HOH . J 5 HOH A 47 647 92 HOH HOH . J 5 HOH A 48 648 36 HOH HOH . J 5 HOH A 49 649 53 HOH HOH . J 5 HOH A 50 650 126 HOH HOH . J 5 HOH A 51 651 26 HOH HOH . J 5 HOH A 52 652 42 HOH HOH . J 5 HOH A 53 653 100 HOH HOH . J 5 HOH A 54 654 94 HOH HOH . J 5 HOH A 55 655 110 HOH HOH . J 5 HOH A 56 656 44 HOH HOH . J 5 HOH A 57 657 46 HOH HOH . J 5 HOH A 58 658 117 HOH HOH . J 5 HOH A 59 659 71 HOH HOH . J 5 HOH A 60 660 85 HOH HOH . J 5 HOH A 61 661 80 HOH HOH . J 5 HOH A 62 662 58 HOH HOH . J 5 HOH A 63 663 23 HOH HOH . J 5 HOH A 64 664 95 HOH HOH . K 5 HOH B 1 601 122 HOH HOH . K 5 HOH B 2 602 81 HOH HOH . K 5 HOH B 3 603 5 HOH HOH . K 5 HOH B 4 604 84 HOH HOH . K 5 HOH B 5 605 56 HOH HOH . K 5 HOH B 6 606 28 HOH HOH . K 5 HOH B 7 607 20 HOH HOH . K 5 HOH B 8 608 25 HOH HOH . K 5 HOH B 9 609 32 HOH HOH . K 5 HOH B 10 610 22 HOH HOH . K 5 HOH B 11 611 45 HOH HOH . K 5 HOH B 12 612 111 HOH HOH . K 5 HOH B 13 613 34 HOH HOH . K 5 HOH B 14 614 124 HOH HOH . K 5 HOH B 15 615 24 HOH HOH . K 5 HOH B 16 616 11 HOH HOH . K 5 HOH B 17 617 125 HOH HOH . K 5 HOH B 18 618 65 HOH HOH . K 5 HOH B 19 619 83 HOH HOH . K 5 HOH B 20 620 59 HOH HOH . K 5 HOH B 21 621 60 HOH HOH . K 5 HOH B 22 622 91 HOH HOH . K 5 HOH B 23 623 55 HOH HOH . K 5 HOH B 24 624 93 HOH HOH . K 5 HOH B 25 625 62 HOH HOH . K 5 HOH B 26 626 115 HOH HOH . K 5 HOH B 27 627 21 HOH HOH . K 5 HOH B 28 628 12 HOH HOH . K 5 HOH B 29 629 89 HOH HOH . K 5 HOH B 30 630 121 HOH HOH . K 5 HOH B 31 631 82 HOH HOH . K 5 HOH B 32 632 90 HOH HOH . K 5 HOH B 33 633 76 HOH HOH . K 5 HOH B 34 634 64 HOH HOH . K 5 HOH B 35 635 118 HOH HOH . K 5 HOH B 36 636 9 HOH HOH . K 5 HOH B 37 637 68 HOH HOH . K 5 HOH B 38 638 66 HOH HOH . K 5 HOH B 39 639 102 HOH HOH . K 5 HOH B 40 640 37 HOH HOH . K 5 HOH B 41 641 73 HOH HOH . K 5 HOH B 42 642 63 HOH HOH . K 5 HOH B 43 643 40 HOH HOH . K 5 HOH B 44 644 4 HOH HOH . K 5 HOH B 45 645 54 HOH HOH . K 5 HOH B 46 646 47 HOH HOH . K 5 HOH B 47 647 8 HOH HOH . K 5 HOH B 48 648 43 HOH HOH . K 5 HOH B 49 649 10 HOH HOH . K 5 HOH B 50 650 123 HOH HOH . K 5 HOH B 51 651 97 HOH HOH . K 5 HOH B 52 652 119 HOH HOH . K 5 HOH B 53 653 78 HOH HOH . K 5 HOH B 54 654 88 HOH HOH . K 5 HOH B 55 655 49 HOH HOH . K 5 HOH B 56 656 31 HOH HOH . K 5 HOH B 57 657 116 HOH HOH . K 5 HOH B 58 658 75 HOH HOH . K 5 HOH B 59 659 120 HOH HOH . K 5 HOH B 60 660 77 HOH HOH . K 5 HOH B 61 661 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CYN . . . H 3 26.096 61.296 -12.731 1 45.51 ? C CYN 502 B 1 HETATM 2 N N CYN . . . H 3 25.239 61.67 -11.983 1 43.91 ? N CYN 502 B 1 # _model_server_stats.io_time_ms 123 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 2 #