data_6WIL # _model_server_result.job_id S72g_N18IWLD_qQRbLtvaA _model_server_result.datetime_utc '2024-11-04 22:43:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wil # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 6WIL # _exptl.entry_id 6WIL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.438 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 100.8 _cell.angle_beta 90.37 _cell.angle_gamma 109.94 _cell.entry_id 6WIL _cell.length_a 46.951 _cell.length_b 49.283 _cell.length_c 86.884 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WIL _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 54 A CYS 54 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A C SER 1 A SER 1 1_555 A N MSE 2 A MSE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 2 A MSE 2 1_555 A N ILE 3 A ILE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C ASP 188 A ASP 188 1_555 A N MSE 189 A MSE 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C MSE 189 A MSE 189 1_555 A N GLN 190 A GLN 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 A C TYR 234 A TYR 234 1_555 A N MSE 235 A MSE 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 235 A MSE 235 1_555 A N GLY 236 A GLY 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C GLY 385 A GLY 385 1_555 A N MSE 386 A MSE 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 A C MSE 386 A MSE 386 1_555 A N GLY 387 A GLY 387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 A C LEU 470 A LEU 470 1_555 A N MSE 471 A MSE 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 A C MSE 471 A MSE 471 1_555 A N LEU 472 A LEU 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 A C TYR 496 A TYR 496 1_555 A N MSE 497 A MSE 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 A C MSE 497 A MSE 497 1_555 A N ALA 498 A ALA 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C16 H34 O5' _chem_comp.formula_weight 306.438 _chem_comp.id C8E _chem_comp.mon_nstd_flag . _chem_comp.name (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6WIL _atom_sites.fract_transf_matrix[1][1] 0.021299 _atom_sites.fract_transf_matrix[1][2] 0.007729 _atom_sites.fract_transf_matrix[1][3] 0.001734 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021586 _atom_sites.fract_transf_matrix[2][3] 0.004445 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011751 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 601 1 SO4 SO4 . C 2 SO4 A 1 602 2 SO4 SO4 . D 3 C8E A 1 603 3 C8E C8E . E 4 PEG A 1 604 4 PEG PEG . F 4 PEG A 1 605 5 PEG PEG . G 4 PEG A 1 606 6 PEG PEG . H 5 HOH A 1 701 1 HOH HOH . H 5 HOH A 2 702 55 HOH HOH . H 5 HOH A 3 703 45 HOH HOH . H 5 HOH A 4 704 14 HOH HOH . H 5 HOH A 5 705 15 HOH HOH . H 5 HOH A 6 706 3 HOH HOH . H 5 HOH A 7 707 16 HOH HOH . H 5 HOH A 8 708 42 HOH HOH . H 5 HOH A 9 709 50 HOH HOH . H 5 HOH A 10 710 35 HOH HOH . H 5 HOH A 11 711 18 HOH HOH . H 5 HOH A 12 712 28 HOH HOH . H 5 HOH A 13 713 19 HOH HOH . H 5 HOH A 14 714 41 HOH HOH . H 5 HOH A 15 715 37 HOH HOH . H 5 HOH A 16 716 20 HOH HOH . H 5 HOH A 17 717 26 HOH HOH . H 5 HOH A 18 718 2 HOH HOH . H 5 HOH A 19 719 10 HOH HOH . H 5 HOH A 20 720 29 HOH HOH . H 5 HOH A 21 721 30 HOH HOH . H 5 HOH A 22 722 44 HOH HOH . H 5 HOH A 23 723 34 HOH HOH . H 5 HOH A 24 724 49 HOH HOH . H 5 HOH A 25 725 21 HOH HOH . H 5 HOH A 26 726 5 HOH HOH . H 5 HOH A 27 727 43 HOH HOH . H 5 HOH A 28 728 9 HOH HOH . H 5 HOH A 29 729 23 HOH HOH . H 5 HOH A 30 730 24 HOH HOH . H 5 HOH A 31 731 25 HOH HOH . H 5 HOH A 32 732 7 HOH HOH . H 5 HOH A 33 733 17 HOH HOH . H 5 HOH A 34 734 47 HOH HOH . H 5 HOH A 35 735 6 HOH HOH . H 5 HOH A 36 736 40 HOH HOH . H 5 HOH A 37 737 22 HOH HOH . H 5 HOH A 38 738 4 HOH HOH . H 5 HOH A 39 739 52 HOH HOH . H 5 HOH A 40 740 11 HOH HOH . H 5 HOH A 41 741 38 HOH HOH . H 5 HOH A 42 742 27 HOH HOH . H 5 HOH A 43 743 8 HOH HOH . H 5 HOH A 44 744 39 HOH HOH . H 5 HOH A 45 745 12 HOH HOH . H 5 HOH A 46 746 31 HOH HOH . H 5 HOH A 47 747 54 HOH HOH . H 5 HOH A 48 748 13 HOH HOH . H 5 HOH A 49 749 46 HOH HOH . H 5 HOH A 50 750 32 HOH HOH . H 5 HOH A 51 751 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C8E . . . D 3 12.786 -2.61 50.747 1 84.31 ? C1 C8E 603 A 1 HETATM 2 C C2 C8E . . . D 3 11.584 -2.983 49.881 1 88.55 ? C2 C8E 603 A 1 HETATM 3 C C3 C8E . . . D 3 10.475 -3.572 50.752 1 74.36 ? C3 C8E 603 A 1 HETATM 4 C C4 C8E . . . D 3 9.259 -3.888 49.884 1 72.17 ? C4 C8E 603 A 1 HETATM 5 C C5 C8E . . . D 3 8.612 -2.587 49.416 1 75.8 ? C5 C8E 603 A 1 HETATM 6 C C6 C8E . . . D 3 7.534 -2.912 48.387 1 61.01 ? C6 C8E 603 A 1 HETATM 7 C C7 C8E . . . D 3 6.426 -1.866 48.469 1 68.29 ? C7 C8E 603 A 1 HETATM 8 C C8 C8E . . . D 3 6.687 -0.759 47.451 1 62.97 ? C8 C8E 603 A 1 HETATM 9 O O9 C8E . . . D 3 5.61 -0.714 46.559 1 81.31 ? O9 C8E 603 A 1 HETATM 10 C C10 C8E . . . D 3 5.727 0.247 45.548 1 70.83 ? C10 C8E 603 A 1 HETATM 11 C C11 C8E . . . D 3 4.642 0.011 44.499 1 60.35 ? C11 C8E 603 A 1 HETATM 12 O O12 C8E . . . D 3 4.023 1.226 44.182 1 68.92 ? O12 C8E 603 A 1 HETATM 13 C C13 C8E . . . D 3 3.188 1.168 43.059 1 64.35 ? C13 C8E 603 A 1 HETATM 14 C C14 C8E . . . D 3 2.595 2.55 42.784 1 65.75 ? C14 C8E 603 A 1 HETATM 15 O O15 C8E . . . D 3 2.559 3.304 43.964 1 71.16 ? O15 C8E 603 A 1 HETATM 16 C C16 C8E . . . D 3 1.911 4.538 43.83 1 59.84 ? C16 C8E 603 A 1 HETATM 17 C C17 C8E . . . D 3 1.461 5.051 45.2 1 68.09 ? C17 C8E 603 A 1 HETATM 18 O O18 C8E . . . D 3 2.574 5.356 45.994 1 68.84 ? O18 C8E 603 A 1 HETATM 19 C C19 C8E . . . D 3 2.273 6.122 47.127 1 76.24 ? C19 C8E 603 A 1 HETATM 20 C C20 C8E . . . D 3 2.699 5.377 48.393 1 66.23 ? C20 C8E 603 A 1 HETATM 21 O O21 C8E . . . D 3 4.062 5.059 48.326 1 65.8 ? O21 C8E 603 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #