data_6WJP # _model_server_result.job_id jWA7HaKxW4lAwoqiJ60DnQ _model_server_result.datetime_utc '2025-04-03 02:24:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wjp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":203}' # _entry.id 6WJP # _exptl.entry_id 6WJP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WJP _cell.length_a 83.341 _cell.length_b 83.341 _cell.length_c 83.341 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WJP _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,E,F,G,I 1 1,3,5 A,C,D,H 1 2,4,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y+1/2,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 41.6705 41.6705 3 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 4 'crystal symmetry operation' 7_555 -z+1/2,-x,y+1/2 0 0 -1 -1 0 0 0 1 0 41.6705 0 41.6705 5 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 6 'crystal symmetry operation' 11_555 y+1/2,-z+1/2,-x 0 1 0 0 0 -1 -1 0 0 41.6705 41.6705 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 312 n n C C2 TRS sing 313 n n C C3 TRS sing 314 n n C N TRS sing 315 n n C1 O1 TRS sing 316 n n C1 H11 TRS sing 317 n n C1 H12 TRS sing 318 n n C2 O2 TRS sing 319 n n C2 H21 TRS sing 320 n n C2 H22 TRS sing 321 n n C3 O3 TRS sing 322 n n C3 H31 TRS sing 323 n n C3 H32 TRS sing 324 n n N HN1 TRS sing 325 n n N HN2 TRS sing 326 n n N HN3 TRS sing 327 n n O1 HO1 TRS sing 328 n n O2 HO2 TRS sing 329 n n O3 HO3 TRS sing 330 n n # _atom_sites.entry_id 6WJP _atom_sites.fract_transf_matrix[1][1] 0.011999 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011999 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011999 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ARG A 1 201 1 ARG ARG . D 3 ACT A 1 202 3 ACT ACT . E 2 ARG B 1 201 1 ARG ARG . F 4 GOL B 1 202 1 GOL GOL . G 5 TRS B 1 203 2 TRS TRS . H 6 HOH A 1 301 9 HOH HOH . H 6 HOH A 2 302 12 HOH HOH . H 6 HOH A 3 303 53 HOH HOH . H 6 HOH A 4 304 7 HOH HOH . H 6 HOH A 5 305 30 HOH HOH . H 6 HOH A 6 306 11 HOH HOH . H 6 HOH A 7 307 49 HOH HOH . H 6 HOH A 8 308 52 HOH HOH . H 6 HOH A 9 309 24 HOH HOH . H 6 HOH A 10 310 25 HOH HOH . H 6 HOH A 11 311 43 HOH HOH . H 6 HOH A 12 312 21 HOH HOH . H 6 HOH A 13 313 5 HOH HOH . H 6 HOH A 14 314 38 HOH HOH . H 6 HOH A 15 315 2 HOH HOH . H 6 HOH A 16 316 17 HOH HOH . H 6 HOH A 17 317 42 HOH HOH . H 6 HOH A 18 318 20 HOH HOH . H 6 HOH A 19 319 41 HOH HOH . H 6 HOH A 20 320 37 HOH HOH . H 6 HOH A 21 321 55 HOH HOH . H 6 HOH A 22 322 19 HOH HOH . H 6 HOH A 23 323 33 HOH HOH . H 6 HOH A 24 324 45 HOH HOH . H 6 HOH A 25 325 40 HOH HOH . H 6 HOH A 26 326 39 HOH HOH . H 6 HOH A 27 327 27 HOH HOH . H 6 HOH A 28 328 54 HOH HOH . H 6 HOH A 29 329 50 HOH HOH . H 6 HOH A 30 330 44 HOH HOH . H 6 HOH A 31 331 51 HOH HOH . H 6 HOH A 32 332 32 HOH HOH . H 6 HOH A 33 333 34 HOH HOH . I 6 HOH B 1 301 46 HOH HOH . I 6 HOH B 2 302 13 HOH HOH . I 6 HOH B 3 303 29 HOH HOH . I 6 HOH B 4 304 47 HOH HOH . I 6 HOH B 5 305 1 HOH HOH . I 6 HOH B 6 306 15 HOH HOH . I 6 HOH B 7 307 8 HOH HOH . I 6 HOH B 8 308 6 HOH HOH . I 6 HOH B 9 309 35 HOH HOH . I 6 HOH B 10 310 36 HOH HOH . I 6 HOH B 11 311 31 HOH HOH . I 6 HOH B 12 312 10 HOH HOH . I 6 HOH B 13 313 16 HOH HOH . I 6 HOH B 14 314 14 HOH HOH . I 6 HOH B 15 315 4 HOH HOH . I 6 HOH B 16 316 48 HOH HOH . I 6 HOH B 17 317 3 HOH HOH . I 6 HOH B 18 318 28 HOH HOH . I 6 HOH B 19 319 23 HOH HOH . I 6 HOH B 20 320 26 HOH HOH . I 6 HOH B 21 321 18 HOH HOH . I 6 HOH B 22 322 22 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . G 5 9.331 9.349 9.375 0.73 48.83 ? C TRS 203 B 1 HETATM 2 C C1 TRS . . . G 5 9.144 10.805 8.948 0.73 48.37 ? C1 TRS 203 B 1 HETATM 3 C C2 TRS . . . G 5 8.925 9.175 10.838 0.73 48.31 ? C2 TRS 203 B 1 HETATM 4 C C3 TRS . . . G 5 10.788 8.928 9.181 0.73 48.33 ? C3 TRS 203 B 1 HETATM 5 N N TRS . . . G 5 8.476 8.497 8.54 0.73 51.09 ? N TRS 203 B 1 HETATM 6 O O1 TRS . . . G 5 9.397 10.964 7.568 0.73 45.98 ? O1 TRS 203 B 1 HETATM 7 O O2 TRS . . . G 5 7.528 9.302 10.993 0.73 45.73 ? O2 TRS 203 B 1 HETATM 8 O O3 TRS . . . G 5 10.975 7.581 9.561 0.73 46.1 ? O3 TRS 203 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #