data_6WK8 # _model_server_result.job_id eNXoG4inC6gcWxlYhS4nhQ _model_server_result.datetime_utc '2024-11-29 12:25:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wk8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 6WK8 # _exptl.entry_id 6WK8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 135.166 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-phenylguanidine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.18 _cell.angle_gamma 90 _cell.entry_id 6WK8 _cell.length_a 141.819 _cell.length_b 50.507 _cell.length_c 108.575 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WK8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H9 N3' _chem_comp.formula_weight 135.166 _chem_comp.id PL0 _chem_comp.mon_nstd_flag . _chem_comp.name 1-phenylguanidine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 PL0 doub 380 n y C2 C1 PL0 sing 381 n y C3 C4 PL0 sing 382 n y C4 C5 PL0 doub 383 n y C5 C6 PL0 sing 384 n y C5 N1 PL0 sing 385 n n C6 C1 PL0 doub 386 n y C7 N1 PL0 sing 387 n n C7 N2 PL0 sing 388 n n C7 N3 PL0 doub 389 n n C2 H2 PL0 sing 390 n n C3 H3 PL0 sing 391 n n C4 H4 PL0 sing 392 n n C6 H6 PL0 sing 393 n n C1 H1 PL0 sing 394 n n N1 HN1 PL0 sing 395 n n N2 HN21 PL0 sing 396 n n N2 HN22 PL0 sing 397 n n N3 HN3 PL0 sing 398 n n # _atom_sites.entry_id 6WK8 _atom_sites.fract_transf_matrix[1][1] 0.007051 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000268 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019799 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009217 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PL0 B 1 201 201 PL0 PL0 . F 4 9PD B 1 202 301 9PD 9PD . G 5 DMU A 1 201 1 DMU DMU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 PL0 . . . E 3 -12.868 -22.55 -30.433 1 66.34 ? C2 PL0 201 B 1 HETATM 2 C C3 PL0 . . . E 3 -12.922 -22.459 -31.815 1 64.33 ? C3 PL0 201 B 1 HETATM 3 C C4 PL0 . . . E 3 -11.853 -21.934 -32.527 1 59.79 ? C4 PL0 201 B 1 HETATM 4 C C5 PL0 . . . E 3 -10.707 -21.512 -31.856 1 60.69 ? C5 PL0 201 B 1 HETATM 5 C C6 PL0 . . . E 3 -10.669 -21.588 -30.463 1 63.02 ? C6 PL0 201 B 1 HETATM 6 C C1 PL0 . . . E 3 -11.749 -22.108 -29.761 1 63.2 ? C1 PL0 201 B 1 HETATM 7 C C7 PL0 . . . E 3 -8.443 -20.484 -32.429 1 54.53 ? C7 PL0 201 B 1 HETATM 8 N N1 PL0 . . . E 3 -9.591 -21.166 -32.675 1 56.49 ? N1 PL0 201 B 1 HETATM 9 N N2 PL0 . . . E 3 -8.25 -19.861 -31.273 1 55.22 ? N2 PL0 201 B 1 HETATM 10 N N3 PL0 . . . E 3 -7.482 -20.515 -33.334 1 49.31 ? N3 PL0 201 B 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #