data_6WK9
#
_model_server_result.job_id            H9gROwjuQ1-n6U1yWEcB1g 
_model_server_result.datetime_utc      '2024-11-26 03:50:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wk9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":103}' 
#
_entry.id    6WK9 
#
_exptl.entry_id    6WK9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              482.562 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            DECYL-BETA-D-MALTOPYRANOSIDE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         92.54 
_cell.angle_beta          90.04 
_cell.angle_gamma         109.63 
_cell.entry_id            6WK9 
_cell.length_a            51.042 
_cell.length_b            75.828 
_cell.length_c            109.123 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WK9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
? tetrameric 4 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,K,L,M,N,O,P,X,Y,Z,AA 1 1 
E,F,G,H,Q,R,S,T,U,V,W,BA,CA,DA,EA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 O N N 
? 3 Q N N 
? 3 U N N 
#
_chem_comp.formula           'C22 H42 O11' 
_chem_comp.formula_weight    482.562 
_chem_comp.id                DMU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DECYL-BETA-D-MALTOPYRANOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     DECYLMALTOSIDE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C40 C37 DMU sing 83 n n 
C40 C43 DMU sing 84 n n 
C37 C34 DMU sing 85 n n 
C34 C31 DMU sing 86 n n 
C31 C28 DMU sing 87 n n 
C28 C25 DMU sing 88 n n 
C22 C25 DMU sing 89 n n 
C22 C19 DMU sing 90 n n 
O61 C57 DMU sing 91 n n 
O4 C7 DMU sing 92 n n 
C18 C19 DMU sing 93 n n 
C18 O16 DMU sing 94 n n 
O5 C6 DMU sing 95 n n 
O5 C4 DMU sing 96 n n 
C57 C4 DMU sing 97 n n 
C6 O16 DMU sing 98 n n 
C6 C1 DMU sing 99 n n 
C7 C5 DMU sing 100 n n 
C7 C8 DMU sing 101 n n 
C4 C3 DMU sing 102 n n 
O1 C10 DMU sing 103 n n 
O1 C9 DMU sing 104 n n 
C10 C5 DMU sing 105 n n 
C10 O7 DMU sing 106 n n 
C5 O3 DMU sing 107 n n 
O49 C1 DMU sing 108 n n 
C8 C9 DMU sing 109 n n 
C8 O2 DMU sing 110 n n 
C1 C2 DMU sing 111 n n 
C11 C9 DMU sing 112 n n 
C11 O6 DMU sing 113 n n 
C3 O7 DMU sing 114 n n 
C3 C2 DMU sing 115 n n 
C2 O55 DMU sing 116 n n 
C1 H1 DMU sing 117 n n 
C2 H2 DMU sing 118 n n 
C3 H3 DMU sing 119 n n 
C4 H4 DMU sing 120 n n 
C6 H5 DMU sing 121 n n 
C18 H6 DMU sing 122 n n 
C18 H7 DMU sing 123 n n 
C19 H8 DMU sing 124 n n 
C19 H9 DMU sing 125 n n 
C22 H10 DMU sing 126 n n 
C22 H11 DMU sing 127 n n 
C25 H12 DMU sing 128 n n 
C25 H13 DMU sing 129 n n 
C28 H14 DMU sing 130 n n 
C28 H15 DMU sing 131 n n 
C31 H16 DMU sing 132 n n 
C31 H17 DMU sing 133 n n 
C34 H18 DMU sing 134 n n 
C34 H19 DMU sing 135 n n 
C37 H20 DMU sing 136 n n 
C37 H21 DMU sing 137 n n 
C40 H22 DMU sing 138 n n 
C40 H23 DMU sing 139 n n 
C43 H24 DMU sing 140 n n 
C43 H25 DMU sing 141 n n 
C43 H26 DMU sing 142 n n 
O49 H27 DMU sing 143 n n 
O55 H28 DMU sing 144 n n 
C57 H29 DMU sing 145 n n 
C57 H30 DMU sing 146 n n 
O61 H31 DMU sing 147 n n 
C5 H32 DMU sing 148 n n 
C7 H33 DMU sing 149 n n 
C8 H34 DMU sing 150 n n 
C9 H35 DMU sing 151 n n 
C10 H36 DMU sing 152 n n 
O2 H37 DMU sing 153 n n 
O3 H38 DMU sing 154 n n 
O4 H39 DMU sing 155 n n 
C11 H40 DMU sing 156 n n 
C11 H41 DMU sing 157 n n 
O6 H42 DMU sing 158 n n 
#
_atom_sites.entry_id                     6WK9 
_atom_sites.fract_transf_matrix[1][1]    0.019592 
_atom_sites.fract_transf_matrix[1][2]    0.006989 
_atom_sites.fract_transf_matrix[1][3]    0.000344 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014002 
_atom_sites.fract_transf_matrix[2][3]    0.000662 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009174 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 DMU B 1 201 201 DMU DMU . 
J 4 U4G B 1 202 501 U4G OGD . 
K 4 U4G B 1 203 601 U4G OGD . 
L 4 U4G A 1 201 201 U4G OGD . 
M 4 U4G C 1 101 101 U4G OGD . 
N 4 U4G C 1 102 201 U4G OGD . 
O 3 DMU C 1 103 301 DMU DMU . 
P 4 U4G C 1 104 401 U4G OGD . 
Q 3 DMU F 1 201 201 DMU DMU . 
R 4 U4G F 1 202 301 U4G OGD . 
S 4 U4G F 1 203 401 U4G OGD . 
T 4 U4G E 1 201 201 U4G OGD . 
U 3 DMU G 1 501 501 DMU DMU . 
V 4 U4G G 1 502 101 U4G OGD . 
W 4 U4G G 1 503 201 U4G OGD . 
X 5 HOH B 1 301 49 HOH HOH . 
X 5 HOH B 2 302 8 HOH HOH . 
X 5 HOH B 3 303 19 HOH HOH . 
X 5 HOH B 4 304 58 HOH HOH . 
X 5 HOH B 5 305 64 HOH HOH . 
X 5 HOH B 6 306 52 HOH HOH . 
X 5 HOH B 7 307 63 HOH HOH . 
X 5 HOH B 8 308 55 HOH HOH . 
X 5 HOH B 9 309 6 HOH HOH . 
X 5 HOH B 10 310 11 HOH HOH . 
Y 5 HOH A 1 301 2 HOH HOH . 
Z 5 HOH C 1 201 30 HOH HOH . 
Z 5 HOH C 2 202 42 HOH HOH . 
Z 5 HOH C 3 203 50 HOH HOH . 
Z 5 HOH C 4 204 1 HOH HOH . 
Z 5 HOH C 5 205 31 HOH HOH . 
Z 5 HOH C 6 206 13 HOH HOH . 
Z 5 HOH C 7 207 28 HOH HOH . 
Z 5 HOH C 8 208 24 HOH HOH . 
Z 5 HOH C 9 209 27 HOH HOH . 
Z 5 HOH C 10 210 23 HOH HOH . 
AA 5 HOH D 1 101 43 HOH HOH . 
AA 5 HOH D 2 102 66 HOH HOH . 
AA 5 HOH D 3 103 65 HOH HOH . 
AA 5 HOH D 4 104 62 HOH HOH . 
AA 5 HOH D 5 105 61 HOH HOH . 
AA 5 HOH D 6 106 12 HOH HOH . 
BA 5 HOH F 1 301 15 HOH HOH . 
BA 5 HOH F 2 302 37 HOH HOH . 
BA 5 HOH F 3 303 20 HOH HOH . 
BA 5 HOH F 4 304 26 HOH HOH . 
BA 5 HOH F 5 305 36 HOH HOH . 
BA 5 HOH F 6 306 51 HOH HOH . 
BA 5 HOH F 7 307 29 HOH HOH . 
BA 5 HOH F 8 308 45 HOH HOH . 
BA 5 HOH F 9 309 44 HOH HOH . 
BA 5 HOH F 10 310 46 HOH HOH . 
CA 5 HOH E 1 301 41 HOH HOH . 
DA 5 HOH G 1 601 3 HOH HOH . 
DA 5 HOH G 2 602 59 HOH HOH . 
DA 5 HOH G 3 603 17 HOH HOH . 
DA 5 HOH G 4 604 48 HOH HOH . 
DA 5 HOH G 5 605 60 HOH HOH . 
DA 5 HOH G 6 606 57 HOH HOH . 
DA 5 HOH G 7 607 40 HOH HOH . 
DA 5 HOH G 8 608 47 HOH HOH . 
DA 5 HOH G 9 609 54 HOH HOH . 
DA 5 HOH G 10 610 56 HOH HOH . 
DA 5 HOH G 11 611 53 HOH HOH . 
EA 5 HOH H 1 101 5 HOH HOH . 
EA 5 HOH H 2 102 39 HOH HOH . 
EA 5 HOH H 3 103 35 HOH HOH . 
EA 5 HOH H 4 104 33 HOH HOH . 
EA 5 HOH H 5 105 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DMU . . . O 3 -14.173 18.085 20.465 1 62.28 ? C1 DMU 103 C 1 
HETATM 2 C C2 DMU . . . O 3 -12.916 17.59 19.828 1 65.72 ? C2 DMU 103 C 1 
HETATM 3 C C3 DMU . . . O 3 -12.217 18.57 18.972 1 64.11 ? C3 DMU 103 C 1 
HETATM 4 C C4 DMU . . . O 3 -13.135 19.677 18.43 1 68.89 ? C4 DMU 103 C 1 
HETATM 5 O O5 DMU . . . O 3 -14.519 19.184 18.229 1 68.35 ? O5 DMU 103 C 1 
HETATM 6 C C6 DMU . . . O 3 -15.159 18.708 19.465 1 71.67 ? C6 DMU 103 C 1 
HETATM 7 O O7 DMU . . . O 3 -11.107 19.14 19.704 1 69.24 ? O7 DMU 103 C 1 
HETATM 8 O O16 DMU . . . O 3 -16.122 17.754 19.135 1 56.93 ? O16 DMU 103 C 1 
HETATM 9 C C18 DMU . . . O 3 -17.127 18.212 18.231 1 38.72 ? C18 DMU 103 C 1 
HETATM 10 C C19 DMU . . . O 3 -18.487 17.512 18.583 1 45.17 ? C19 DMU 103 C 1 
HETATM 11 C C22 DMU . . . O 3 -18.321 15.973 18.411 1 52.25 ? C22 DMU 103 C 1 
HETATM 12 C C25 DMU . . . O 3 -19.673 15.25 18.686 1 31.33 ? C25 DMU 103 C 1 
HETATM 13 C C28 DMU . . . O 3 -20.634 15.404 17.464 1 29.81 ? C28 DMU 103 C 1 
HETATM 14 C C31 DMU . . . O 3 -19.835 15.314 16.136 1 23.3 ? C31 DMU 103 C 1 
HETATM 15 C C34 DMU . . . O 3 -20.505 16.235 15.076 1 22.76 ? C34 DMU 103 C 1 
HETATM 16 C C37 DMU . . . O 3 -19.766 17.583 15.04 1 18.3 ? C37 DMU 103 C 1 
HETATM 17 C C40 DMU . . . O 3 -19.958 18.243 13.662 1 19.49 ? C40 DMU 103 C 1 
HETATM 18 C C43 DMU . . . O 3 -19.91 19.762 13.81 1 23.29 ? C43 DMU 103 C 1 
HETATM 19 O O49 DMU . . . O 3 -13.844 19.041 21.476 1 73.45 ? O49 DMU 103 C 1 
HETATM 20 O O55 DMU . . . O 3 -13.253 16.433 19.002 1 72.43 ? O55 DMU 103 C 1 
HETATM 21 C C57 DMU . . . O 3 -12.619 20.146 17.115 1 68.92 ? C57 DMU 103 C 1 
HETATM 22 O O61 DMU . . . O 3 -11.728 21.209 17.299 1 77.12 ? O61 DMU 103 C 1 
HETATM 23 C C5 DMU . . . O 3 -8.801 18.594 20.071 1 75.17 ? C5 DMU 103 C 1 
HETATM 24 C C7 DMU . . . O 3 -7.489 18.743 19.463 1 68.97 ? C7 DMU 103 C 1 
HETATM 25 C C8 DMU . . . O 3 -7.281 19.994 18.693 1 68.56 ? C8 DMU 103 C 1 
HETATM 26 C C9 DMU . . . O 3 -8.605 20.751 18.337 1 65.54 ? C9 DMU 103 C 1 
HETATM 27 O O1 DMU . . . O 3 -9.634 19.68 17.981 1 69.44 ? O1 DMU 103 C 1 
HETATM 28 C C10 DMU . . . O 3 -9.923 18.742 19.072 1 70.6 ? C10 DMU 103 C 1 
HETATM 29 O O2 DMU . . . O 3 -6.434 20.863 19.435 1 80.86 ? O2 DMU 103 C 1 
HETATM 30 O O3 DMU . . . O 3 -8.955 19.56 21.179 1 73.49 ? O3 DMU 103 C 1 
HETATM 31 O O4 DMU . . . O 3 -7.289 17.601 18.528 1 57.71 ? O4 DMU 103 C 1 
HETATM 32 C C11 DMU . . . O 3 -8.399 21.604 17.23 1 58.63 ? C11 DMU 103 C 1 
HETATM 33 O O6 DMU . . . O 3 -7.574 22.676 17.61 1 52.69 ? O6 DMU 103 C 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           33 
#