data_6WK9
#
_model_server_result.job_id            oj537O6-Ok3jxSwMvvMJ-g 
_model_server_result.datetime_utc      '2024-10-16 14:16:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wk9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":104}' 
#
_entry.id    6WK9 
#
_exptl.entry_id    6WK9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              171.283 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-octylguanidine 
_entity.pdbx_number_of_molecules    11 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         92.54 
_cell.angle_beta          90.04 
_cell.angle_gamma         109.63 
_cell.entry_id            6WK9 
_cell.length_a            51.042 
_cell.length_b            75.828 
_cell.length_c            109.123 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WK9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
? tetrameric 4 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,K,L,M,N,O,P,X,Y,Z,AA 1 1 
E,F,G,H,Q,R,S,T,U,V,W,BA,CA,DA,EA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 P N N 
? 4 R N N 
? 4 S N N 
? 4 T N N 
? 4 V N N 
? 4 W N N 
#
_chem_comp.formula           'C9 H21 N3' 
_chem_comp.formula_weight    171.283 
_chem_comp.id                U4G 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-octylguanidine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N3 C9 U4G doub 434 n n 
N1 C9 U4G sing 435 n n 
N1 C8 U4G sing 436 n n 
C9 N2 U4G sing 437 n n 
C7 C8 U4G sing 438 n n 
C7 C6 U4G sing 439 n n 
C6 C5 U4G sing 440 n n 
C5 C4 U4G sing 441 n n 
C4 C3 U4G sing 442 n n 
C3 C2 U4G sing 443 n n 
C2 C1 U4G sing 444 n n 
C2 H1 U4G sing 445 n n 
C2 H2 U4G sing 446 n n 
C1 H3 U4G sing 447 n n 
C1 H4 U4G sing 448 n n 
C1 H5 U4G sing 449 n n 
C8 H6 U4G sing 450 n n 
C8 H7 U4G sing 451 n n 
C7 H8 U4G sing 452 n n 
C7 H9 U4G sing 453 n n 
N1 H10 U4G sing 454 n n 
N2 H11 U4G sing 455 n n 
N2 H12 U4G sing 456 n n 
N3 H13 U4G sing 457 n n 
C6 H14 U4G sing 458 n n 
C6 H15 U4G sing 459 n n 
C5 H16 U4G sing 460 n n 
C5 H17 U4G sing 461 n n 
C4 H18 U4G sing 462 n n 
C4 H19 U4G sing 463 n n 
C3 H20 U4G sing 464 n n 
C3 H21 U4G sing 465 n n 
#
_atom_sites.entry_id                     6WK9 
_atom_sites.fract_transf_matrix[1][1]    0.019592 
_atom_sites.fract_transf_matrix[1][2]    0.006989 
_atom_sites.fract_transf_matrix[1][3]    0.000344 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014002 
_atom_sites.fract_transf_matrix[2][3]    0.000662 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009174 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 DMU B 1 201 201 DMU DMU . 
J 4 U4G B 1 202 501 U4G OGD . 
K 4 U4G B 1 203 601 U4G OGD . 
L 4 U4G A 1 201 201 U4G OGD . 
M 4 U4G C 1 101 101 U4G OGD . 
N 4 U4G C 1 102 201 U4G OGD . 
O 3 DMU C 1 103 301 DMU DMU . 
P 4 U4G C 1 104 401 U4G OGD . 
Q 3 DMU F 1 201 201 DMU DMU . 
R 4 U4G F 1 202 301 U4G OGD . 
S 4 U4G F 1 203 401 U4G OGD . 
T 4 U4G E 1 201 201 U4G OGD . 
U 3 DMU G 1 501 501 DMU DMU . 
V 4 U4G G 1 502 101 U4G OGD . 
W 4 U4G G 1 503 201 U4G OGD . 
X 5 HOH B 1 301 49 HOH HOH . 
X 5 HOH B 2 302 8 HOH HOH . 
X 5 HOH B 3 303 19 HOH HOH . 
X 5 HOH B 4 304 58 HOH HOH . 
X 5 HOH B 5 305 64 HOH HOH . 
X 5 HOH B 6 306 52 HOH HOH . 
X 5 HOH B 7 307 63 HOH HOH . 
X 5 HOH B 8 308 55 HOH HOH . 
X 5 HOH B 9 309 6 HOH HOH . 
X 5 HOH B 10 310 11 HOH HOH . 
Y 5 HOH A 1 301 2 HOH HOH . 
Z 5 HOH C 1 201 30 HOH HOH . 
Z 5 HOH C 2 202 42 HOH HOH . 
Z 5 HOH C 3 203 50 HOH HOH . 
Z 5 HOH C 4 204 1 HOH HOH . 
Z 5 HOH C 5 205 31 HOH HOH . 
Z 5 HOH C 6 206 13 HOH HOH . 
Z 5 HOH C 7 207 28 HOH HOH . 
Z 5 HOH C 8 208 24 HOH HOH . 
Z 5 HOH C 9 209 27 HOH HOH . 
Z 5 HOH C 10 210 23 HOH HOH . 
AA 5 HOH D 1 101 43 HOH HOH . 
AA 5 HOH D 2 102 66 HOH HOH . 
AA 5 HOH D 3 103 65 HOH HOH . 
AA 5 HOH D 4 104 62 HOH HOH . 
AA 5 HOH D 5 105 61 HOH HOH . 
AA 5 HOH D 6 106 12 HOH HOH . 
BA 5 HOH F 1 301 15 HOH HOH . 
BA 5 HOH F 2 302 37 HOH HOH . 
BA 5 HOH F 3 303 20 HOH HOH . 
BA 5 HOH F 4 304 26 HOH HOH . 
BA 5 HOH F 5 305 36 HOH HOH . 
BA 5 HOH F 6 306 51 HOH HOH . 
BA 5 HOH F 7 307 29 HOH HOH . 
BA 5 HOH F 8 308 45 HOH HOH . 
BA 5 HOH F 9 309 44 HOH HOH . 
BA 5 HOH F 10 310 46 HOH HOH . 
CA 5 HOH E 1 301 41 HOH HOH . 
DA 5 HOH G 1 601 3 HOH HOH . 
DA 5 HOH G 2 602 59 HOH HOH . 
DA 5 HOH G 3 603 17 HOH HOH . 
DA 5 HOH G 4 604 48 HOH HOH . 
DA 5 HOH G 5 605 60 HOH HOH . 
DA 5 HOH G 6 606 57 HOH HOH . 
DA 5 HOH G 7 607 40 HOH HOH . 
DA 5 HOH G 8 608 47 HOH HOH . 
DA 5 HOH G 9 609 54 HOH HOH . 
DA 5 HOH G 10 610 56 HOH HOH . 
DA 5 HOH G 11 611 53 HOH HOH . 
EA 5 HOH H 1 101 5 HOH HOH . 
EA 5 HOH H 2 102 39 HOH HOH . 
EA 5 HOH H 3 103 35 HOH HOH . 
EA 5 HOH H 4 104 33 HOH HOH . 
EA 5 HOH H 5 105 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 U4G . . . P 4 -19.751 20.104 3.341 1 33.28 ? C2 U4G 104 C 1 
HETATM 2 C C1 U4G . . . P 4 -20.972 20.885 2.859 1 42.14 ? C1 U4G 104 C 1 
HETATM 3 C C8 U4G . . . P 4 -15.441 24.712 6.029 1 52.52 ? C8 U4G 104 C 1 
HETATM 4 C C7 U4G . . . P 4 -16.081 24.565 4.651 1 42.28 ? C7 U4G 104 C 1 
HETATM 5 C C9 U4G . . . P 4 -15.407 26.676 7.598 1 68.4 ? C9 U4G 104 C 1 
HETATM 6 N N1 U4G . . . P 4 -16.15 25.707 6.814 1 59.56 ? N1 U4G 104 C 1 
HETATM 7 N N2 U4G . . . P 4 -16.021 27.533 8.275 1 66.25 ? N2 U4G 104 C 1 
HETATM 8 N N3 U4G . . . P 4 -14.155 26.655 7.599 1 62.99 ? N3 U4G 104 C 1 
HETATM 9 C C6 U4G . . . P 4 -17.565 24.212 4.739 1 49.03 ? C6 U4G 104 C 1 
HETATM 10 C C5 U4G . . . P 4 -17.809 22.772 5.182 1 54.92 ? C5 U4G 104 C 1 
HETATM 11 C C4 U4G . . . P 4 -19.1 22.214 4.587 1 52.02 ? C4 U4G 104 C 1 
HETATM 12 C C3 U4G . . . P 4 -19.146 20.688 4.616 1 45.15 ? C3 U4G 104 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           12 
#