data_6WKE
#
_model_server_result.job_id            O50SaJ-MvmxU7BgovyBkcg 
_model_server_result.datetime_utc      '2024-11-07 11:15:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wke 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    6WKE 
#
_exptl.entry_id    6WKE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6WKE 
_cell.length_a            181.781 
_cell.length_b            181.781 
_cell.length_c            56.389 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WKE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        173 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D 1 1 
B,C,E 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 128 A CYS 128 1_555 A SG CYS 136 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf2 B SG CYS 128 B CYS 128 1_555 B SG CYS 136 B CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6WKE 
_atom_sites.fract_transf_matrix[1][1]    0.005501 
_atom_sites.fract_transf_matrix[1][2]    0.003176 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006352 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017734 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL B 1 401 401 GOL GOL . 
D 3 HOH A 1 401 162 HOH HOH . 
D 3 HOH A 2 402 179 HOH HOH . 
D 3 HOH A 3 403 121 HOH HOH . 
D 3 HOH A 4 404 126 HOH HOH . 
D 3 HOH A 5 405 9 HOH HOH . 
D 3 HOH A 6 406 75 HOH HOH . 
D 3 HOH A 7 407 41 HOH HOH . 
D 3 HOH A 8 408 53 HOH HOH . 
D 3 HOH A 9 409 49 HOH HOH . 
D 3 HOH A 10 410 1 HOH HOH . 
D 3 HOH A 11 411 3 HOH HOH . 
D 3 HOH A 12 412 4 HOH HOH . 
D 3 HOH A 13 413 143 HOH HOH . 
D 3 HOH A 14 414 184 HOH HOH . 
D 3 HOH A 15 415 131 HOH HOH . 
D 3 HOH A 16 416 169 HOH HOH . 
D 3 HOH A 17 417 67 HOH HOH . 
D 3 HOH A 18 418 83 HOH HOH . 
D 3 HOH A 19 419 24 HOH HOH . 
D 3 HOH A 20 420 72 HOH HOH . 
D 3 HOH A 21 421 43 HOH HOH . 
D 3 HOH A 22 422 70 HOH HOH . 
D 3 HOH A 23 423 85 HOH HOH . 
D 3 HOH A 24 424 81 HOH HOH . 
D 3 HOH A 25 425 150 HOH HOH . 
D 3 HOH A 26 426 64 HOH HOH . 
D 3 HOH A 27 427 28 HOH HOH . 
D 3 HOH A 28 428 142 HOH HOH . 
D 3 HOH A 29 429 27 HOH HOH . 
D 3 HOH A 30 430 191 HOH HOH . 
D 3 HOH A 31 431 195 HOH HOH . 
D 3 HOH A 32 432 78 HOH HOH . 
D 3 HOH A 33 433 225 HOH HOH . 
D 3 HOH A 34 434 69 HOH HOH . 
D 3 HOH A 35 435 14 HOH HOH . 
D 3 HOH A 36 436 36 HOH HOH . 
D 3 HOH A 37 437 115 HOH HOH . 
D 3 HOH A 38 438 86 HOH HOH . 
D 3 HOH A 39 439 42 HOH HOH . 
D 3 HOH A 40 440 59 HOH HOH . 
D 3 HOH A 41 441 5 HOH HOH . 
D 3 HOH A 42 442 74 HOH HOH . 
D 3 HOH A 43 443 57 HOH HOH . 
D 3 HOH A 44 444 40 HOH HOH . 
D 3 HOH A 45 445 19 HOH HOH . 
D 3 HOH A 46 446 48 HOH HOH . 
D 3 HOH A 47 447 188 HOH HOH . 
D 3 HOH A 48 448 135 HOH HOH . 
D 3 HOH A 49 449 133 HOH HOH . 
D 3 HOH A 50 450 104 HOH HOH . 
D 3 HOH A 51 451 201 HOH HOH . 
D 3 HOH A 52 452 31 HOH HOH . 
D 3 HOH A 53 453 32 HOH HOH . 
D 3 HOH A 54 454 56 HOH HOH . 
D 3 HOH A 55 455 130 HOH HOH . 
D 3 HOH A 56 456 35 HOH HOH . 
D 3 HOH A 57 457 18 HOH HOH . 
D 3 HOH A 58 458 182 HOH HOH . 
D 3 HOH A 59 459 39 HOH HOH . 
D 3 HOH A 60 460 12 HOH HOH . 
D 3 HOH A 61 461 80 HOH HOH . 
D 3 HOH A 62 462 22 HOH HOH . 
D 3 HOH A 63 463 20 HOH HOH . 
D 3 HOH A 64 464 2 HOH HOH . 
D 3 HOH A 65 465 10 HOH HOH . 
D 3 HOH A 66 466 198 HOH HOH . 
D 3 HOH A 67 467 170 HOH HOH . 
D 3 HOH A 68 468 180 HOH HOH . 
D 3 HOH A 69 469 54 HOH HOH . 
D 3 HOH A 70 470 17 HOH HOH . 
D 3 HOH A 71 471 181 HOH HOH . 
D 3 HOH A 72 472 124 HOH HOH . 
D 3 HOH A 73 473 91 HOH HOH . 
D 3 HOH A 74 474 127 HOH HOH . 
D 3 HOH A 75 475 66 HOH HOH . 
D 3 HOH A 76 476 190 HOH HOH . 
D 3 HOH A 77 477 140 HOH HOH . 
D 3 HOH A 78 478 6 HOH HOH . 
D 3 HOH A 79 479 11 HOH HOH . 
D 3 HOH A 80 480 88 HOH HOH . 
D 3 HOH A 81 481 61 HOH HOH . 
D 3 HOH A 82 482 23 HOH HOH . 
D 3 HOH A 83 483 138 HOH HOH . 
D 3 HOH A 84 484 84 HOH HOH . 
D 3 HOH A 85 485 34 HOH HOH . 
D 3 HOH A 86 486 151 HOH HOH . 
D 3 HOH A 87 487 154 HOH HOH . 
D 3 HOH A 88 488 114 HOH HOH . 
D 3 HOH A 89 489 146 HOH HOH . 
D 3 HOH A 90 490 15 HOH HOH . 
D 3 HOH A 91 491 187 HOH HOH . 
D 3 HOH A 92 492 73 HOH HOH . 
D 3 HOH A 93 493 106 HOH HOH . 
D 3 HOH A 94 494 208 HOH HOH . 
D 3 HOH A 95 495 58 HOH HOH . 
D 3 HOH A 96 496 45 HOH HOH . 
D 3 HOH A 97 497 193 HOH HOH . 
D 3 HOH A 98 498 141 HOH HOH . 
D 3 HOH A 99 499 29 HOH HOH . 
D 3 HOH A 100 500 13 HOH HOH . 
D 3 HOH A 101 501 46 HOH HOH . 
D 3 HOH A 102 502 163 HOH HOH . 
D 3 HOH A 103 503 157 HOH HOH . 
D 3 HOH A 104 504 71 HOH HOH . 
D 3 HOH A 105 505 139 HOH HOH . 
D 3 HOH A 106 506 183 HOH HOH . 
D 3 HOH A 107 507 165 HOH HOH . 
D 3 HOH A 108 508 129 HOH HOH . 
D 3 HOH A 109 509 47 HOH HOH . 
D 3 HOH A 110 510 176 HOH HOH . 
D 3 HOH A 111 511 82 HOH HOH . 
D 3 HOH A 112 512 200 HOH HOH . 
D 3 HOH A 113 513 108 HOH HOH . 
D 3 HOH A 114 514 16 HOH HOH . 
D 3 HOH A 115 515 220 HOH HOH . 
D 3 HOH A 116 516 202 HOH HOH . 
D 3 HOH A 117 517 172 HOH HOH . 
D 3 HOH A 118 518 205 HOH HOH . 
D 3 HOH A 119 519 152 HOH HOH . 
D 3 HOH A 120 520 185 HOH HOH . 
D 3 HOH A 121 521 189 HOH HOH . 
D 3 HOH A 122 522 186 HOH HOH . 
D 3 HOH A 123 523 55 HOH HOH . 
D 3 HOH A 124 524 92 HOH HOH . 
D 3 HOH A 125 525 196 HOH HOH . 
D 3 HOH A 126 526 240 HOH HOH . 
D 3 HOH A 127 527 148 HOH HOH . 
D 3 HOH A 128 528 109 HOH HOH . 
D 3 HOH A 129 529 241 HOH HOH . 
D 3 HOH A 130 530 90 HOH HOH . 
D 3 HOH A 131 531 105 HOH HOH . 
D 3 HOH A 132 532 204 HOH HOH . 
D 3 HOH A 133 533 136 HOH HOH . 
D 3 HOH A 134 534 192 HOH HOH . 
D 3 HOH A 135 535 145 HOH HOH . 
D 3 HOH A 136 536 207 HOH HOH . 
D 3 HOH A 137 537 125 HOH HOH . 
D 3 HOH A 138 538 203 HOH HOH . 
D 3 HOH A 139 539 147 HOH HOH . 
D 3 HOH A 140 540 103 HOH HOH . 
D 3 HOH A 141 541 242 HOH HOH . 
D 3 HOH A 142 542 155 HOH HOH . 
D 3 HOH A 143 543 158 HOH HOH . 
D 3 HOH A 144 544 199 HOH HOH . 
D 3 HOH A 145 545 65 HOH HOH . 
D 3 HOH A 146 546 161 HOH HOH . 
D 3 HOH A 147 547 137 HOH HOH . 
D 3 HOH A 148 548 206 HOH HOH . 
D 3 HOH A 149 549 102 HOH HOH . 
D 3 HOH A 150 550 33 HOH HOH . 
D 3 HOH A 151 551 87 HOH HOH . 
D 3 HOH A 152 552 30 HOH HOH . 
D 3 HOH A 153 553 111 HOH HOH . 
D 3 HOH A 154 554 194 HOH HOH . 
E 3 HOH B 1 501 95 HOH HOH . 
E 3 HOH B 2 502 112 HOH HOH . 
E 3 HOH B 3 503 37 HOH HOH . 
E 3 HOH B 4 504 166 HOH HOH . 
E 3 HOH B 5 505 98 HOH HOH . 
E 3 HOH B 6 506 223 HOH HOH . 
E 3 HOH B 7 507 62 HOH HOH . 
E 3 HOH B 8 508 97 HOH HOH . 
E 3 HOH B 9 509 8 HOH HOH . 
E 3 HOH B 10 510 210 HOH HOH . 
E 3 HOH B 11 511 94 HOH HOH . 
E 3 HOH B 12 512 110 HOH HOH . 
E 3 HOH B 13 513 21 HOH HOH . 
E 3 HOH B 14 514 167 HOH HOH . 
E 3 HOH B 15 515 25 HOH HOH . 
E 3 HOH B 16 516 101 HOH HOH . 
E 3 HOH B 17 517 233 HOH HOH . 
E 3 HOH B 18 518 231 HOH HOH . 
E 3 HOH B 19 519 218 HOH HOH . 
E 3 HOH B 20 520 235 HOH HOH . 
E 3 HOH B 21 521 51 HOH HOH . 
E 3 HOH B 22 522 79 HOH HOH . 
E 3 HOH B 23 523 77 HOH HOH . 
E 3 HOH B 24 524 123 HOH HOH . 
E 3 HOH B 25 525 7 HOH HOH . 
E 3 HOH B 26 526 26 HOH HOH . 
E 3 HOH B 27 527 76 HOH HOH . 
E 3 HOH B 28 528 118 HOH HOH . 
E 3 HOH B 29 529 164 HOH HOH . 
E 3 HOH B 30 530 234 HOH HOH . 
E 3 HOH B 31 531 178 HOH HOH . 
E 3 HOH B 32 532 232 HOH HOH . 
E 3 HOH B 33 533 52 HOH HOH . 
E 3 HOH B 34 534 38 HOH HOH . 
E 3 HOH B 35 535 89 HOH HOH . 
E 3 HOH B 36 536 44 HOH HOH . 
E 3 HOH B 37 537 50 HOH HOH . 
E 3 HOH B 38 538 60 HOH HOH . 
E 3 HOH B 39 539 128 HOH HOH . 
E 3 HOH B 40 540 100 HOH HOH . 
E 3 HOH B 41 541 217 HOH HOH . 
E 3 HOH B 42 542 107 HOH HOH . 
E 3 HOH B 43 543 156 HOH HOH . 
E 3 HOH B 44 544 113 HOH HOH . 
E 3 HOH B 45 545 63 HOH HOH . 
E 3 HOH B 46 546 226 HOH HOH . 
E 3 HOH B 47 547 224 HOH HOH . 
E 3 HOH B 48 548 177 HOH HOH . 
E 3 HOH B 49 549 215 HOH HOH . 
E 3 HOH B 50 550 117 HOH HOH . 
E 3 HOH B 51 551 116 HOH HOH . 
E 3 HOH B 52 552 211 HOH HOH . 
E 3 HOH B 53 553 230 HOH HOH . 
E 3 HOH B 54 554 228 HOH HOH . 
E 3 HOH B 55 555 93 HOH HOH . 
E 3 HOH B 56 556 238 HOH HOH . 
E 3 HOH B 57 557 99 HOH HOH . 
E 3 HOH B 58 558 175 HOH HOH . 
E 3 HOH B 59 559 219 HOH HOH . 
E 3 HOH B 60 560 212 HOH HOH . 
E 3 HOH B 61 561 221 HOH HOH . 
E 3 HOH B 62 562 209 HOH HOH . 
E 3 HOH B 63 563 68 HOH HOH . 
E 3 HOH B 64 564 122 HOH HOH . 
E 3 HOH B 65 565 119 HOH HOH . 
E 3 HOH B 66 566 216 HOH HOH . 
E 3 HOH B 67 567 197 HOH HOH . 
E 3 HOH B 68 568 173 HOH HOH . 
E 3 HOH B 69 569 222 HOH HOH . 
E 3 HOH B 70 570 236 HOH HOH . 
E 3 HOH B 71 571 214 HOH HOH . 
E 3 HOH B 72 572 239 HOH HOH . 
E 3 HOH B 73 573 213 HOH HOH . 
E 3 HOH B 74 574 153 HOH HOH . 
E 3 HOH B 75 575 227 HOH HOH . 
E 3 HOH B 76 576 149 HOH HOH . 
E 3 HOH B 77 577 96 HOH HOH . 
E 3 HOH B 78 578 237 HOH HOH . 
E 3 HOH B 79 579 229 HOH HOH . 
E 3 HOH B 80 580 134 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 -54.443 28.46 -45.577 1 82.97 ? C1 GOL 401 B 1 
HETATM 2 O O1 GOL . . . C 2 -54.649 27.192 -46.115 1 85.29 ? O1 GOL 401 B 1 
HETATM 3 C C2 GOL . . . C 2 -54.932 28.407 -44.107 1 93.98 ? C2 GOL 401 B 1 
HETATM 4 O O2 GOL . . . C 2 -54.167 27.539 -43.335 1 91.31 ? O2 GOL 401 B 1 
HETATM 5 C C3 GOL . . . C 2 -54.862 29.877 -43.597 1 87.16 ? C3 GOL 401 B 1 
HETATM 6 O O3 GOL . . . C 2 -55.737 30.633 -44.39 1 70.28 ? O3 GOL 401 B 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           6 
#