data_6WKP # _model_server_result.job_id NKmK_BgUQNDVLLGMcRejiQ _model_server_result.datetime_utc '2024-11-08 12:03:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wkp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":201}' # _entry.id 6WKP # _exptl.entry_id 6WKP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.98 _cell.angle_gamma 90 _cell.entry_id 6WKP _cell.length_a 33.388 _cell.length_b 71.848 _cell.length_c 106.961 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WKP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 14 A HIS 59 1_555 G ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc2 A OD2 ASP 37 A ASP 82 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc3 A NE2 HIS 100 A HIS 145 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc4 E ZN ZN . A ZN 201 1_555 K O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc5 K O HOH . A HOH 301 1_555 G ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc6 B NE2 HIS 14 B HIS 59 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc7 B OD2 ASP 37 B ASP 82 1_555 G ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc8 B NE2 HIS 100 B HIS 145 1_555 G ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc9 L O HOH . B HOH 310 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc10 C NE2 HIS 14 C HIS 59 1_555 J ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc11 C OD2 ASP 37 C ASP 82 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc12 C NE2 HIS 100 C HIS 145 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc13 M O HOH . C HOH 305 1_555 J ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc14 D OD2 ASP 37 D ASP 82 1_555 J ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc15 D NE2 HIS 100 D HIS 145 1_555 J ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 205 n n O1 C6 MES sing 206 n n C2 C3 MES sing 207 n n C2 H21 MES sing 208 n n C2 H22 MES sing 209 n n C3 N4 MES sing 210 n n C3 H31 MES sing 211 n n C3 H32 MES sing 212 n n N4 C5 MES sing 213 n n N4 C7 MES sing 214 n n N4 HN4 MES sing 215 n n C5 C6 MES sing 216 n n C5 H51 MES sing 217 n n C5 H52 MES sing 218 n n C6 H61 MES sing 219 n n C6 H62 MES sing 220 n n C7 C8 MES sing 221 n n C7 H71 MES sing 222 n n C7 H72 MES sing 223 n n C8 S MES sing 224 n n C8 H81 MES sing 225 n n C8 H82 MES sing 226 n n S O1S MES doub 227 n n S O2S MES doub 228 n n S O3S MES sing 229 n n # _atom_sites.entry_id 6WKP _atom_sites.fract_transf_matrix[1][1] 0.029951 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001557 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013918 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 201 201 ZN ZN . F 3 MES B 1 201 201 MES MES . G 2 ZN B 1 202 202 ZN ZN . H 2 ZN C 1 201 201 ZN ZN . I 3 MES D 1 201 203 MES MES . J 2 ZN D 1 202 201 ZN ZN . K 4 HOH A 1 301 10 HOH HOH . K 4 HOH A 2 302 9 HOH HOH . K 4 HOH A 3 303 30 HOH HOH . K 4 HOH A 4 304 8 HOH HOH . K 4 HOH A 5 305 26 HOH HOH . K 4 HOH A 6 306 36 HOH HOH . K 4 HOH A 7 307 11 HOH HOH . L 4 HOH B 1 301 14 HOH HOH . L 4 HOH B 2 302 24 HOH HOH . L 4 HOH B 3 303 23 HOH HOH . L 4 HOH B 4 304 3 HOH HOH . L 4 HOH B 5 305 27 HOH HOH . L 4 HOH B 6 306 1 HOH HOH . L 4 HOH B 7 307 2 HOH HOH . L 4 HOH B 8 308 20 HOH HOH . L 4 HOH B 9 309 34 HOH HOH . L 4 HOH B 10 310 33 HOH HOH . L 4 HOH B 11 311 22 HOH HOH . L 4 HOH B 12 312 5 HOH HOH . M 4 HOH C 1 301 15 HOH HOH . M 4 HOH C 2 302 21 HOH HOH . M 4 HOH C 3 303 31 HOH HOH . M 4 HOH C 4 304 4 HOH HOH . M 4 HOH C 5 305 35 HOH HOH . M 4 HOH C 6 306 13 HOH HOH . M 4 HOH C 7 307 28 HOH HOH . M 4 HOH C 8 308 16 HOH HOH . M 4 HOH C 9 309 19 HOH HOH . N 4 HOH D 1 301 32 HOH HOH . N 4 HOH D 2 302 29 HOH HOH . N 4 HOH D 3 303 7 HOH HOH . N 4 HOH D 4 304 18 HOH HOH . N 4 HOH D 5 305 17 HOH HOH . N 4 HOH D 6 306 12 HOH HOH . N 4 HOH D 7 307 37 HOH HOH . N 4 HOH D 8 308 25 HOH HOH . N 4 HOH D 9 309 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . I 3 -0.853 27.23 32.039 1 51.44 ? O1 MES 201 D 1 HETATM 2 C C2 MES . . . I 3 0.327 27.247 31.236 1 44.78 ? C2 MES 201 D 1 HETATM 3 C C3 MES . . . I 3 0.06 27.857 29.866 1 53.83 ? C3 MES 201 D 1 HETATM 4 N N4 MES . . . I 3 -1.106 27.18 29.328 1 51.8 ? N4 MES 201 D 1 HETATM 5 C C5 MES . . . I 3 -2.322 27.218 30.122 1 61.39 ? C5 MES 201 D 1 HETATM 6 C C6 MES . . . I 3 -1.943 26.54 31.43 1 59.56 ? C6 MES 201 D 1 HETATM 7 C C7 MES . . . I 3 -1.243 27.217 27.883 1 44.52 ? C7 MES 201 D 1 HETATM 8 C C8 MES . . . I 3 -2.35 26.228 27.549 1 41.72 ? C8 MES 201 D 1 HETATM 9 S S MES . . . I 3 -1.974 25.475 26.122 1 51.8 ? S MES 201 D 1 HETATM 10 O O1S MES . . . I 3 -0.991 26.292 25.375 1 51.19 ? O1S MES 201 D 1 HETATM 11 O O2S MES . . . I 3 -3.215 25.301 25.336 1 54 ? O2S MES 201 D 1 HETATM 12 O O3S MES . . . I 3 -1.388 24.147 26.412 1 53.57 ? O3S MES 201 D 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 12 #