data_6WNJ # _model_server_result.job_id 8E_N4wYJkjkI7vhVA3Ez7g _model_server_result.datetime_utc '2024-11-15 08:58:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wnj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":205}' # _entry.id 6WNJ # _exptl.entry_id 6WNJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRIS-HYDROXYMETHYL-METHYL-AMMONIUM _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WNJ _cell.length_a 87.933 _cell.length_b 160.495 _cell.length_c 86.327 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WNJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 N N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 28 A CYS 28 1_555 B SG CYS 28 B CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 32 A CYS 32 1_555 C SG CYS 32 C CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id 144 _chem_comp.mon_nstd_flag . _chem_comp.name TRIS-HYDROXYMETHYL-METHYL-AMMONIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N 144 sing 1 n n C1 H11 144 sing 2 n n C1 H12 144 sing 3 n n C1 H13 144 sing 4 n n N C2 144 sing 5 n n N C3 144 sing 6 n n N C4 144 sing 7 n n C2 O2 144 sing 8 n n C2 H21 144 sing 9 n n C2 H22 144 sing 10 n n O2 HO2 144 sing 11 n n C3 O3 144 sing 12 n n C3 H31 144 sing 13 n n C3 H32 144 sing 14 n n O3 HO3 144 sing 15 n n C4 O4 144 sing 16 n n C4 H41 144 sing 17 n n C4 H42 144 sing 18 n n O4 HO4 144 sing 19 n n # _atom_sites.entry_id 6WNJ _atom_sites.fract_transf_matrix[1][1] 0.011372 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006231 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011584 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GOL A 1 201 3 GOL GOL . E 2 GOL A 1 202 4 GOL GOL . F 2 GOL A 1 203 8 GOL GOL . G 3 144 A 1 204 8 144 144 . H 4 SO4 A 1 205 5 SO4 SO4 . I 4 SO4 A 1 206 7 SO4 SO4 . J 2 GOL B 1 201 6 GOL GOL . K 2 GOL C 1 201 1 GOL GOL . L 2 GOL C 1 202 2 GOL GOL . M 2 GOL C 1 203 9 GOL GOL . N 3 144 C 1 204 6 144 144 . O 3 144 C 1 205 10 144 144 . P 5 HOH A 1 301 34 HOH HOH . P 5 HOH A 2 302 44 HOH HOH . P 5 HOH A 3 303 49 HOH HOH . P 5 HOH A 4 304 53 HOH HOH . P 5 HOH A 5 305 55 HOH HOH . P 5 HOH A 6 306 43 HOH HOH . P 5 HOH A 7 307 94 HOH HOH . P 5 HOH A 8 308 20 HOH HOH . P 5 HOH A 9 309 54 HOH HOH . P 5 HOH A 10 310 51 HOH HOH . P 5 HOH A 11 311 12 HOH HOH . P 5 HOH A 12 312 85 HOH HOH . P 5 HOH A 13 313 93 HOH HOH . P 5 HOH A 14 314 23 HOH HOH . P 5 HOH A 15 315 120 HOH HOH . P 5 HOH A 16 316 122 HOH HOH . P 5 HOH A 17 317 6 HOH HOH . P 5 HOH A 18 318 48 HOH HOH . P 5 HOH A 19 319 87 HOH HOH . P 5 HOH A 20 320 17 HOH HOH . P 5 HOH A 21 321 88 HOH HOH . P 5 HOH A 22 322 57 HOH HOH . P 5 HOH A 23 323 86 HOH HOH . P 5 HOH A 24 324 60 HOH HOH . P 5 HOH A 25 325 29 HOH HOH . P 5 HOH A 26 326 92 HOH HOH . P 5 HOH A 27 327 50 HOH HOH . P 5 HOH A 28 328 9 HOH HOH . P 5 HOH A 29 329 31 HOH HOH . P 5 HOH A 30 330 59 HOH HOH . P 5 HOH A 31 331 56 HOH HOH . P 5 HOH A 32 332 119 HOH HOH . P 5 HOH A 33 333 47 HOH HOH . P 5 HOH A 34 334 90 HOH HOH . P 5 HOH A 35 335 45 HOH HOH . P 5 HOH A 36 336 121 HOH HOH . P 5 HOH A 37 337 61 HOH HOH . P 5 HOH A 38 338 52 HOH HOH . P 5 HOH A 39 339 46 HOH HOH . P 5 HOH A 40 340 89 HOH HOH . Q 5 HOH B 1 301 63 HOH HOH . Q 5 HOH B 2 302 68 HOH HOH . Q 5 HOH B 3 303 75 HOH HOH . Q 5 HOH B 4 304 58 HOH HOH . Q 5 HOH B 5 305 70 HOH HOH . Q 5 HOH B 6 306 97 HOH HOH . Q 5 HOH B 7 307 71 HOH HOH . Q 5 HOH B 8 308 13 HOH HOH . Q 5 HOH B 9 309 5 HOH HOH . Q 5 HOH B 10 310 72 HOH HOH . Q 5 HOH B 11 311 16 HOH HOH . Q 5 HOH B 12 312 7 HOH HOH . Q 5 HOH B 13 313 66 HOH HOH . Q 5 HOH B 14 314 100 HOH HOH . Q 5 HOH B 15 315 26 HOH HOH . Q 5 HOH B 16 316 10 HOH HOH . Q 5 HOH B 17 317 18 HOH HOH . Q 5 HOH B 18 318 69 HOH HOH . Q 5 HOH B 19 319 96 HOH HOH . Q 5 HOH B 20 320 3 HOH HOH . Q 5 HOH B 21 321 98 HOH HOH . Q 5 HOH B 22 322 99 HOH HOH . Q 5 HOH B 23 323 41 HOH HOH . Q 5 HOH B 24 324 95 HOH HOH . Q 5 HOH B 25 325 19 HOH HOH . Q 5 HOH B 26 326 118 HOH HOH . Q 5 HOH B 27 327 74 HOH HOH . Q 5 HOH B 28 328 62 HOH HOH . R 5 HOH C 1 301 37 HOH HOH . R 5 HOH C 2 302 77 HOH HOH . R 5 HOH C 3 303 83 HOH HOH . R 5 HOH C 4 304 101 HOH HOH . R 5 HOH C 5 305 110 HOH HOH . R 5 HOH C 6 306 42 HOH HOH . R 5 HOH C 7 307 79 HOH HOH . R 5 HOH C 8 308 80 HOH HOH . R 5 HOH C 9 309 111 HOH HOH . R 5 HOH C 10 310 116 HOH HOH . R 5 HOH C 11 311 65 HOH HOH . R 5 HOH C 12 312 81 HOH HOH . R 5 HOH C 13 313 22 HOH HOH . R 5 HOH C 14 314 33 HOH HOH . R 5 HOH C 15 315 105 HOH HOH . R 5 HOH C 16 316 14 HOH HOH . R 5 HOH C 17 317 108 HOH HOH . R 5 HOH C 18 318 82 HOH HOH . R 5 HOH C 19 319 15 HOH HOH . R 5 HOH C 20 320 11 HOH HOH . R 5 HOH C 21 321 21 HOH HOH . R 5 HOH C 22 322 27 HOH HOH . R 5 HOH C 23 323 76 HOH HOH . R 5 HOH C 24 324 25 HOH HOH . R 5 HOH C 25 325 78 HOH HOH . R 5 HOH C 26 326 115 HOH HOH . R 5 HOH C 27 327 104 HOH HOH . R 5 HOH C 28 328 24 HOH HOH . R 5 HOH C 29 329 28 HOH HOH . R 5 HOH C 30 330 107 HOH HOH . R 5 HOH C 31 331 102 HOH HOH . R 5 HOH C 32 332 32 HOH HOH . R 5 HOH C 33 333 109 HOH HOH . R 5 HOH C 34 334 117 HOH HOH . R 5 HOH C 35 335 103 HOH HOH . R 5 HOH C 36 336 8 HOH HOH . R 5 HOH C 37 337 113 HOH HOH . R 5 HOH C 38 338 106 HOH HOH . R 5 HOH C 39 339 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 144 . . . O 3 18.108 17.866 87.897 1 79.74 ? C1 144 205 C 1 HETATM 2 N N 144 . . . O 3 16.776 17.46 88.3 1 83.25 ? N 144 205 C 1 HETATM 3 C C2 144 . . . O 3 15.781 18.475 87.992 1 82.14 ? C2 144 205 C 1 HETATM 4 O O2 144 . . . O 3 14.508 17.887 87.905 1 74.62 ? O2 144 205 C 1 HETATM 5 C C3 144 . . . O 3 16.447 16.289 87.493 1 84.77 ? C3 144 205 C 1 HETATM 6 O O3 144 . . . O 3 16.533 16.629 86.125 1 71.9 ? O3 144 205 C 1 HETATM 7 C C4 144 . . . O 3 16.815 17.218 89.746 1 75.82 ? C4 144 205 C 1 HETATM 8 O O4 144 . . . O 3 15.947 18.015 90.519 1 64.83 ? O4 144 205 C 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 8 #