data_6WNM # _model_server_result.job_id ZtgSQxV3stC_gahWm-uUyA _model_server_result.datetime_utc '2024-10-19 14:42:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wnm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 6WNM # _exptl.entry_id 6WNM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 483.867 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description '[(2R)-3-{[2-(carboxymethoxy)benzene-1-carbonyl]amino}-2-methoxypropyl](hydroxy)mercury' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WNM _cell.length_a 38.109 _cell.length_b 47.477 _cell.length_c 169.332 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WNM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1,3 B,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 84.666 3 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 47.477 169.332 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 23 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 23 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id HG2 _struct_conn.ptnr2_label_comp_id U5J _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id U5J _struct_conn.ptnr2_auth_seq_id 101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.197 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C13 H17 Hg N O6' _chem_comp.formula_weight 483.867 _chem_comp.id U5J _chem_comp.mon_nstd_flag . _chem_comp.name '[(2R)-3-{[2-(carboxymethoxy)benzene-1-carbonyl]amino}-2-methoxypropyl](hydroxy)mercury' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C15 U5J doub 345 n y C14 C13 U5J sing 346 n y C15 C16 U5J sing 347 n y C18 C19 U5J sing 348 n n C18 O17 U5J sing 349 n n O20 C19 U5J doub 350 n n C19 O21 U5J sing 351 n n C13 C12 U5J doub 352 n y C16 O17 U5J sing 353 n n C16 C11 U5J doub 354 n y C12 C11 U5J sing 355 n y C11 C09 U5J sing 356 n n C09 O10 U5J doub 357 n n C09 N08 U5J sing 358 n n N08 C07 U5J sing 359 n n C03 C04 U5J sing 360 n n C07 C04 U5J sing 361 n n O05 C04 U5J sing 362 n n O05 C06 U5J sing 363 n n C03 HG2 U5J sing 364 n n HG2 O01 U5J sing 365 n n C13 H1 U5J sing 366 n n C15 H2 U5J sing 367 n n C03 H3 U5J sing 368 n n C04 H4 U5J sing 369 n n C06 H5 U5J sing 370 n n C06 H6 U5J sing 371 n n C06 H7 U5J sing 372 n n C07 H8 U5J sing 373 n n C07 H9 U5J sing 374 n n C12 H10 U5J sing 375 n n C14 H11 U5J sing 376 n n C18 H12 U5J sing 377 n n C18 H13 U5J sing 378 n n N08 H14 U5J sing 379 n n O01 H15 U5J sing 380 n n O21 H16 U5J sing 381 n n C03 H17 U5J sing 382 n n # _atom_sites.entry_id 6WNM _atom_sites.fract_transf_matrix[1][1] 0.026241 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021063 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005906 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 U5J A 1 101 1 U5J LIG . D 3 HOH A 1 201 2 HOH HOH . D 3 HOH A 2 202 3 HOH HOH . D 3 HOH A 3 203 5 HOH HOH . D 3 HOH A 4 204 1 HOH HOH . D 3 HOH A 5 205 6 HOH HOH . E 3 HOH B 1 101 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 U5J . . . C 2 10.258 41.749 72.019 1 53.27 ? C13 U5J 101 A 1 HETATM 2 C C15 U5J . . . C 2 8.411 40.681 71.067 1 55.92 ? C15 U5J 101 A 1 HETATM 3 C C03 U5J . . . C 2 5.98 36.694 76.082 1 84 ? C03 U5J 101 A 1 HETATM 4 C C04 U5J . . . C 2 6.555 37.844 76.938 1 80.1 ? C04 U5J 101 A 1 HETATM 5 C C06 U5J . . . C 2 5.231 39.866 77.68 1 89.65 ? C06 U5J 101 A 1 HETATM 6 C C07 U5J . . . C 2 8.001 38.16 76.58 1 66.42 ? C07 U5J 101 A 1 HETATM 7 C C09 U5J . . . C 2 9.012 39.289 74.557 1 61.95 ? C09 U5J 101 A 1 HETATM 8 C C11 U5J . . . C 2 9.056 40.051 73.238 1 59.35 ? C11 U5J 101 A 1 HETATM 9 C C12 U5J . . . C 2 10.054 40.987 73.114 1 56.92 ? C12 U5J 101 A 1 HETATM 10 C C14 U5J . . . C 2 9.423 41.591 70.986 1 53.29 ? C14 U5J 101 A 1 HETATM 11 C C16 U5J . . . C 2 8.227 39.91 72.173 1 60.46 ? C16 U5J 101 A 1 HETATM 12 C C18 U5J . . . C 2 6.222 39.045 71.201 1 70.24 ? C18 U5J 101 A 1 HETATM 13 C C19 U5J . . . C 2 5.165 38.21 71.885 1 75.53 ? C19 U5J 101 A 1 HETATM 14 N N08 U5J . . . C 2 7.911 38.871 75.326 1 61.36 ? N08 U5J 101 A 1 HETATM 15 O O01 U5J . . . C 2 6.291 34.265 71.923 1 52.39 ? O01 U5J 101 A 1 HETATM 16 O O05 U5J . . . C 2 5.664 38.945 76.685 1 87.21 ? O05 U5J 101 A 1 HETATM 17 O O10 U5J . . . C 2 9.981 39.026 75.079 1 66.34 ? O10 U5J 101 A 1 HETATM 18 O O17 U5J . . . C 2 7.183 39.038 72.184 1 66.29 ? O17 U5J 101 A 1 HETATM 19 O O20 U5J . . . C 2 4.737 37.152 71.381 1 77.71 ? O20 U5J 101 A 1 HETATM 20 O O21 U5J . . . C 2 4.732 38.525 73.009 1 76.57 ? O21 U5J 101 A 1 HETATM 21 HG HG2 U5J . . . C 2 7.301 36.168 73.676 1 51.56 ? HG2 U5J 101 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #