data_6WO9 # _model_server_result.job_id eElZjH5w9MNjr6yVx2k5hg _model_server_result.datetime_utc '2024-11-13 16:21:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wo9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6WO9 # _exptl.entry_id 6WO9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WO9 _cell.length_a 47.291 _cell.length_b 59.777 _cell.length_c 62.463 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WO9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 71 A GLY 50 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc2 A OE2 GLU 87 A GLU 66 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc3 A OE1 GLU 87 A GLU 66 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc4 A OE1 GLU 91 A GLU 70 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc5 A OE1 GLU 91 A GLU 70 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc6 B O27 O81 . A O81 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc7 B O36 O81 . A O81 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc8 B O21 O81 . A O81 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc9 B O27 O81 . A O81 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc10 B O37 O81 . A O81 401 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc11 C MG MG . A MG 402 1_555 H O HOH . A HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc12 D MG MG . A MG 403 1_555 H O HOH . A HOH 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc13 D MG MG . A MG 403 1_555 H O HOH . A HOH 571 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc14 E MG MG . A MG 404 1_555 H O HOH . A HOH 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? metalc ? metalc15 E MG MG . A MG 404 1_555 H O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.798 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6WO9 _atom_sites.fract_transf_matrix[1][1] 0.021146 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016729 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016009 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 O81 A 1 401 401 O81 O81 . C 3 MG A 1 402 501 MG MG . D 3 MG A 1 403 502 MG MG . E 3 MG A 1 404 503 MG MG . F 4 CL A 1 405 601 CL CL . G 5 SO4 A 1 406 701 SO4 SO4 . H 6 HOH A 1 501 36 HOH HOH . H 6 HOH A 2 502 89 HOH HOH . H 6 HOH A 3 503 84 HOH HOH . H 6 HOH A 4 504 87 HOH HOH . H 6 HOH A 5 505 40 HOH HOH . H 6 HOH A 6 506 65 HOH HOH . H 6 HOH A 7 507 25 HOH HOH . H 6 HOH A 8 508 54 HOH HOH . H 6 HOH A 9 509 62 HOH HOH . H 6 HOH A 10 510 53 HOH HOH . H 6 HOH A 11 511 46 HOH HOH . H 6 HOH A 12 512 22 HOH HOH . H 6 HOH A 13 513 86 HOH HOH . H 6 HOH A 14 514 55 HOH HOH . H 6 HOH A 15 515 69 HOH HOH . H 6 HOH A 16 516 83 HOH HOH . H 6 HOH A 17 517 32 HOH HOH . H 6 HOH A 18 518 45 HOH HOH . H 6 HOH A 19 519 13 HOH HOH . H 6 HOH A 20 520 5 HOH HOH . H 6 HOH A 21 521 23 HOH HOH . H 6 HOH A 22 522 78 HOH HOH . H 6 HOH A 23 523 35 HOH HOH . H 6 HOH A 24 524 41 HOH HOH . H 6 HOH A 25 525 1 HOH HOH . H 6 HOH A 26 526 3 HOH HOH . H 6 HOH A 27 527 10 HOH HOH . H 6 HOH A 28 528 30 HOH HOH . H 6 HOH A 29 529 6 HOH HOH . H 6 HOH A 30 530 75 HOH HOH . H 6 HOH A 31 531 19 HOH HOH . H 6 HOH A 32 532 21 HOH HOH . H 6 HOH A 33 533 18 HOH HOH . H 6 HOH A 34 534 2 HOH HOH . H 6 HOH A 35 535 76 HOH HOH . H 6 HOH A 36 536 48 HOH HOH . H 6 HOH A 37 537 58 HOH HOH . H 6 HOH A 38 538 29 HOH HOH . H 6 HOH A 39 539 39 HOH HOH . H 6 HOH A 40 540 74 HOH HOH . H 6 HOH A 41 541 51 HOH HOH . H 6 HOH A 42 542 4 HOH HOH . H 6 HOH A 43 543 14 HOH HOH . H 6 HOH A 44 544 12 HOH HOH . H 6 HOH A 45 545 50 HOH HOH . H 6 HOH A 46 546 43 HOH HOH . H 6 HOH A 47 547 60 HOH HOH . H 6 HOH A 48 548 20 HOH HOH . H 6 HOH A 49 549 15 HOH HOH . H 6 HOH A 50 550 11 HOH HOH . H 6 HOH A 51 551 42 HOH HOH . H 6 HOH A 52 552 26 HOH HOH . H 6 HOH A 53 553 24 HOH HOH . H 6 HOH A 54 554 85 HOH HOH . H 6 HOH A 55 555 16 HOH HOH . H 6 HOH A 56 556 38 HOH HOH . H 6 HOH A 57 557 8 HOH HOH . H 6 HOH A 58 558 63 HOH HOH . H 6 HOH A 59 559 49 HOH HOH . H 6 HOH A 60 560 7 HOH HOH . H 6 HOH A 61 561 88 HOH HOH . H 6 HOH A 62 562 34 HOH HOH . H 6 HOH A 63 563 27 HOH HOH . H 6 HOH A 64 564 68 HOH HOH . H 6 HOH A 65 565 47 HOH HOH . H 6 HOH A 66 566 31 HOH HOH . H 6 HOH A 67 567 44 HOH HOH . H 6 HOH A 68 568 61 HOH HOH . H 6 HOH A 69 569 28 HOH HOH . H 6 HOH A 70 570 17 HOH HOH . H 6 HOH A 71 571 79 HOH HOH . H 6 HOH A 72 572 56 HOH HOH . H 6 HOH A 73 573 77 HOH HOH . H 6 HOH A 74 574 52 HOH HOH . H 6 HOH A 75 575 81 HOH HOH . H 6 HOH A 76 576 66 HOH HOH . H 6 HOH A 77 577 57 HOH HOH . H 6 HOH A 78 578 9 HOH HOH . H 6 HOH A 79 579 73 HOH HOH . H 6 HOH A 80 580 80 HOH HOH . H 6 HOH A 81 581 71 HOH HOH . H 6 HOH A 82 582 82 HOH HOH . H 6 HOH A 83 583 59 HOH HOH . H 6 HOH A 84 584 70 HOH HOH . H 6 HOH A 85 585 37 HOH HOH . H 6 HOH A 86 586 72 HOH HOH . H 6 HOH A 87 587 67 HOH HOH . H 6 HOH A 88 588 33 HOH HOH . H 6 HOH A 89 589 64 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 12.605 _atom_site.Cartn_y 8.215 _atom_site.Cartn_z 16.371 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #