data_6WOK # _model_server_result.job_id --8DUN6bDuU0jtZvtc0skQ _model_server_result.datetime_utc '2024-11-25 00:53:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wok # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":601}' # _entry.id 6WOK # _exptl.entry_id 6WOK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 503.575 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1R,3R)-1-(2,6-difluoro-4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-2-(2-fluoro-2-methylpropyl)-3-methyl-2,3,4,9-tetrahydro-1H-beta-carboline _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 86.61 _cell.angle_beta 74.78 _cell.angle_gamma 63.29 _cell.entry_id 6WOK _cell.length_a 53.609 _cell.length_b 59.102 _cell.length_c 94.718 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WOK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N # _chem_comp.formula 'C28 H33 F4 N3 O' _chem_comp.formula_weight 503.575 _chem_comp.id U6D _chem_comp.mon_nstd_flag . _chem_comp.name (1R,3R)-1-(2,6-difluoro-4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-2-(2-fluoro-2-methylpropyl)-3-methyl-2,3,4,9-tetrahydro-1H-beta-carboline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F29 C28 U6D sing 404 n n C20 C19 U6D sing 405 n n C1 C2 U6D sing 406 n n C21 C19 U6D sing 407 n n C19 C18 U6D sing 408 n n C19 F22 U6D sing 409 n n C28 C27 U6D doub 410 n y C28 C23 U6D sing 411 n y N17 C15 U6D sing 412 n n N17 C2 U6D sing 413 n n N17 C18 U6D sing 414 n n C15 C23 U6D sing 415 n n C15 C14 U6D sing 416 n n C2 C4 U6D sing 417 n n C27 C26 U6D sing 418 n y C23 C24 U6D doub 419 n y C14 N12 U6D sing 420 n y C14 C5 U6D doub 421 n y N12 C11 U6D sing 422 n y C4 C5 U6D sing 423 n n C5 C6 U6D sing 424 n y C26 O30 U6D sing 425 n n C26 C25 U6D doub 426 n y C11 C6 U6D doub 427 n y C11 C10 U6D sing 428 n y C24 C25 U6D sing 429 n y C24 F39 U6D sing 430 n n O30 C31 U6D sing 431 n n C6 C7 U6D sing 432 n y C10 C9 U6D doub 433 n y C7 C8 U6D doub 434 n y C9 C8 U6D sing 435 n y C31 C32 U6D sing 436 n n C32 N33 U6D sing 437 n n N33 C34 U6D sing 438 n n N33 C36 U6D sing 439 n n C34 C35 U6D sing 440 n n C36 C35 U6D sing 441 n n C35 C37 U6D sing 442 n n C37 F38 U6D sing 443 n n C4 H1 U6D sing 444 n n C4 H2 U6D sing 445 n n C7 H3 U6D sing 446 n n C8 H4 U6D sing 447 n n C9 H5 U6D sing 448 n n C10 H6 U6D sing 449 n n C1 H7 U6D sing 450 n n C1 H8 U6D sing 451 n n C1 H9 U6D sing 452 n n C15 H10 U6D sing 453 n n C18 H11 U6D sing 454 n n C18 H12 U6D sing 455 n n C2 H13 U6D sing 456 n n C20 H14 U6D sing 457 n n C20 H15 U6D sing 458 n n C20 H16 U6D sing 459 n n C21 H17 U6D sing 460 n n C21 H18 U6D sing 461 n n C21 H19 U6D sing 462 n n C25 H20 U6D sing 463 n n C27 H21 U6D sing 464 n n C31 H22 U6D sing 465 n n C31 H23 U6D sing 466 n n C32 H24 U6D sing 467 n n C32 H25 U6D sing 468 n n C34 H26 U6D sing 469 n n C34 H27 U6D sing 470 n n C35 H28 U6D sing 471 n n C36 H29 U6D sing 472 n n C36 H30 U6D sing 473 n n C37 H31 U6D sing 474 n n C37 H32 U6D sing 475 n n N12 H33 U6D sing 476 n n # _atom_sites.entry_id 6WOK _atom_sites.fract_transf_matrix[1][1] 0.018654 _atom_sites.fract_transf_matrix[1][2] -0.009384 _atom_sites.fract_transf_matrix[1][3] -0.005732 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01894 _atom_sites.fract_transf_matrix[2][3] 0.001298 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010967 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 G9J D 1 601 1 G9J G9J . F 3 U6D A 1 601 1 U6D DRG . G 2 G9J A 1 602 3 G9J G9J . H 3 U6D C 1 601 2 U6D DRG . I 2 G9J C 1 602 2 G9J G9J . J 3 U6D B 1 601 3 U6D DRG . K 4 HOH D 1 701 193 HOH HOH . K 4 HOH D 2 702 173 HOH HOH . K 4 HOH D 3 703 32 HOH HOH . K 4 HOH D 4 704 175 HOH HOH . K 4 HOH D 5 705 222 HOH HOH . K 4 HOH D 6 706 189 HOH HOH . K 4 HOH D 7 707 10 HOH HOH . K 4 HOH D 8 708 61 HOH HOH . K 4 HOH D 9 709 253 HOH HOH . K 4 HOH D 10 710 92 HOH HOH . K 4 HOH D 11 711 178 HOH HOH . K 4 HOH D 12 712 35 HOH HOH . K 4 HOH D 13 713 21 HOH HOH . K 4 HOH D 14 714 43 HOH HOH . K 4 HOH D 15 715 188 HOH HOH . K 4 HOH D 16 716 29 HOH HOH . K 4 HOH D 17 717 241 HOH HOH . K 4 HOH D 18 718 90 HOH HOH . K 4 HOH D 19 719 22 HOH HOH . K 4 HOH D 20 720 14 HOH HOH . K 4 HOH D 21 721 210 HOH HOH . K 4 HOH D 22 722 27 HOH HOH . K 4 HOH D 23 723 257 HOH HOH . K 4 HOH D 24 724 137 HOH HOH . K 4 HOH D 25 725 34 HOH HOH . K 4 HOH D 26 726 203 HOH HOH . K 4 HOH D 27 727 172 HOH HOH . K 4 HOH D 28 728 91 HOH HOH . K 4 HOH D 29 729 183 HOH HOH . K 4 HOH D 30 730 212 HOH HOH . K 4 HOH D 31 731 208 HOH HOH . K 4 HOH D 32 732 77 HOH HOH . K 4 HOH D 33 733 179 HOH HOH . K 4 HOH D 34 734 226 HOH HOH . K 4 HOH D 35 735 45 HOH HOH . K 4 HOH D 36 736 364 HOH HOH . K 4 HOH D 37 737 366 HOH HOH . K 4 HOH D 38 738 344 HOH HOH . K 4 HOH D 39 739 174 HOH HOH . L 4 HOH A 1 701 17 HOH HOH . L 4 HOH A 2 702 4 HOH HOH . L 4 HOH A 3 703 100 HOH HOH . L 4 HOH A 4 704 8 HOH HOH . L 4 HOH A 5 705 40 HOH HOH . L 4 HOH A 6 706 42 HOH HOH . L 4 HOH A 7 707 365 HOH HOH . L 4 HOH A 8 708 64 HOH HOH . L 4 HOH A 9 709 59 HOH HOH . L 4 HOH A 10 710 63 HOH HOH . L 4 HOH A 11 711 25 HOH HOH . L 4 HOH A 12 712 94 HOH HOH . L 4 HOH A 13 713 224 HOH HOH . L 4 HOH A 14 714 274 HOH HOH . L 4 HOH A 15 715 201 HOH HOH . L 4 HOH A 16 716 176 HOH HOH . L 4 HOH A 17 717 62 HOH HOH . L 4 HOH A 18 718 134 HOH HOH . L 4 HOH A 19 719 293 HOH HOH . L 4 HOH A 20 720 67 HOH HOH . L 4 HOH A 21 721 31 HOH HOH . L 4 HOH A 22 722 213 HOH HOH . L 4 HOH A 23 723 82 HOH HOH . L 4 HOH A 24 724 184 HOH HOH . L 4 HOH A 25 725 37 HOH HOH . L 4 HOH A 26 726 177 HOH HOH . L 4 HOH A 27 727 69 HOH HOH . L 4 HOH A 28 728 70 HOH HOH . L 4 HOH A 29 729 345 HOH HOH . L 4 HOH A 30 730 13 HOH HOH . M 4 HOH C 1 701 53 HOH HOH . M 4 HOH C 2 702 354 HOH HOH . M 4 HOH C 3 703 350 HOH HOH . M 4 HOH C 4 704 23 HOH HOH . M 4 HOH C 5 705 169 HOH HOH . M 4 HOH C 6 706 205 HOH HOH . M 4 HOH C 7 707 199 HOH HOH . M 4 HOH C 8 708 116 HOH HOH . M 4 HOH C 9 709 353 HOH HOH . M 4 HOH C 10 710 360 HOH HOH . M 4 HOH C 11 711 192 HOH HOH . M 4 HOH C 12 712 361 HOH HOH . M 4 HOH C 13 713 359 HOH HOH . M 4 HOH C 14 714 357 HOH HOH . M 4 HOH C 15 715 239 HOH HOH . M 4 HOH C 16 716 206 HOH HOH . M 4 HOH C 17 717 7 HOH HOH . M 4 HOH C 18 718 237 HOH HOH . M 4 HOH C 19 719 48 HOH HOH . M 4 HOH C 20 720 190 HOH HOH . M 4 HOH C 21 721 15 HOH HOH . M 4 HOH C 22 722 19 HOH HOH . M 4 HOH C 23 723 216 HOH HOH . M 4 HOH C 24 724 24 HOH HOH . M 4 HOH C 25 725 160 HOH HOH . M 4 HOH C 26 726 358 HOH HOH . M 4 HOH C 27 727 367 HOH HOH . N 4 HOH B 1 701 220 HOH HOH . N 4 HOH B 2 702 11 HOH HOH . N 4 HOH B 3 703 223 HOH HOH . N 4 HOH B 4 704 159 HOH HOH . N 4 HOH B 5 705 349 HOH HOH . N 4 HOH B 6 706 66 HOH HOH . N 4 HOH B 7 707 97 HOH HOH . N 4 HOH B 8 708 185 HOH HOH . N 4 HOH B 9 709 130 HOH HOH . N 4 HOH B 10 710 196 HOH HOH . N 4 HOH B 11 711 165 HOH HOH . N 4 HOH B 12 712 26 HOH HOH . N 4 HOH B 13 713 57 HOH HOH . N 4 HOH B 14 714 362 HOH HOH . N 4 HOH B 15 715 363 HOH HOH . N 4 HOH B 16 716 182 HOH HOH . N 4 HOH B 17 717 351 HOH HOH . N 4 HOH B 18 718 2 HOH HOH . N 4 HOH B 19 719 65 HOH HOH . N 4 HOH B 20 720 5 HOH HOH . N 4 HOH B 21 721 289 HOH HOH . N 4 HOH B 22 722 256 HOH HOH . N 4 HOH B 23 723 356 HOH HOH . N 4 HOH B 24 724 52 HOH HOH . N 4 HOH B 25 725 55 HOH HOH . N 4 HOH B 26 726 332 HOH HOH . N 4 HOH B 27 727 352 HOH HOH . N 4 HOH B 28 728 200 HOH HOH . N 4 HOH B 29 729 143 HOH HOH . N 4 HOH B 30 730 171 HOH HOH . N 4 HOH B 31 731 95 HOH HOH . N 4 HOH B 32 732 214 HOH HOH . N 4 HOH B 33 733 197 HOH HOH . N 4 HOH B 34 734 79 HOH HOH . N 4 HOH B 35 735 167 HOH HOH . N 4 HOH B 36 736 355 HOH HOH . N 4 HOH B 37 737 73 HOH HOH . N 4 HOH B 38 738 264 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 U6D . . . J 3 13.984 12.785 3.166 1 54.83 ? C4 U6D 601 B 1 HETATM 2 C C14 U6D . . . J 3 11.817 13.963 3.585 1 44.31 ? C14 U6D 601 B 1 HETATM 3 C C5 U6D . . . J 3 13.029 13.933 2.99 1 48.52 ? C5 U6D 601 B 1 HETATM 4 C C6 U6D . . . J 3 13.184 15.134 2.198 1 44.01 ? C6 U6D 601 B 1 HETATM 5 C C11 U6D . . . J 3 11.981 15.86 2.382 1 49.24 ? C11 U6D 601 B 1 HETATM 6 C C7 U6D . . . J 3 14.212 15.636 1.384 1 43.62 ? C7 U6D 601 B 1 HETATM 7 C C8 U6D . . . J 3 14.008 16.848 0.756 1 39.34 ? C8 U6D 601 B 1 HETATM 8 C C9 U6D . . . J 3 12.829 17.556 0.929 1 49.15 ? C9 U6D 601 B 1 HETATM 9 C C10 U6D . . . J 3 11.802 17.092 1.748 1 45.04 ? C10 U6D 601 B 1 HETATM 10 C C1 U6D . . . J 3 14.21 12.867 5.716 1 62.15 ? C1 U6D 601 B 1 HETATM 11 C C15 U6D . . . J 3 11.263 12.85 4.457 1 51.34 ? C15 U6D 601 B 1 HETATM 12 C C18 U6D . . . J 3 11.987 10.523 3.943 1 58.44 ? C18 U6D 601 B 1 HETATM 13 C C19 U6D . . . J 3 12.194 9.184 4.662 1 64.55 ? C19 U6D 601 B 1 HETATM 14 C C2 U6D . . . J 3 13.685 12.09 4.507 1 58.35 ? C2 U6D 601 B 1 HETATM 15 C C20 U6D . . . J 3 13.403 9.054 5.588 1 73.5 ? C20 U6D 601 B 1 HETATM 16 C C21 U6D . . . J 3 10.927 8.776 5.412 1 75.42 ? C21 U6D 601 B 1 HETATM 17 C C23 U6D . . . J 3 9.944 12.377 3.822 1 48.94 ? C23 U6D 601 B 1 HETATM 18 C C24 U6D . . . J 3 9.759 12.162 2.452 1 38.87 ? C24 U6D 601 B 1 HETATM 19 C C25 U6D . . . J 3 8.554 11.734 1.929 1 32.48 ? C25 U6D 601 B 1 HETATM 20 C C26 U6D . . . J 3 7.443 11.543 2.739 1 41.94 ? C26 U6D 601 B 1 HETATM 21 C C27 U6D . . . J 3 7.607 11.757 4.113 1 35.63 ? C27 U6D 601 B 1 HETATM 22 C C28 U6D . . . J 3 8.838 12.174 4.632 1 55.46 ? C28 U6D 601 B 1 HETATM 23 C C31 U6D . . . J 3 5.893 11.313 0.849 1 25.07 ? C31 U6D 601 B 1 HETATM 24 C C32 U6D . . . J 3 4.517 10.673 0.715 1 46.24 ? C32 U6D 601 B 1 HETATM 25 C C34 U6D . . . J 3 4.033 10.512 -1.651 1 61.04 ? C34 U6D 601 B 1 HETATM 26 C C35 U6D . . . J 3 2.629 10.974 -2.076 1 62.25 ? C35 U6D 601 B 1 HETATM 27 C C36 U6D . . . J 3 2.4 10.946 -0.547 1 52.2 ? C36 U6D 601 B 1 HETATM 28 C C37 U6D . . . J 3 2.668 12.355 -2.756 1 70.36 ? C37 U6D 601 B 1 HETATM 29 F F22 U6D . . . J 3 12.422 8.278 3.642 1 60.68 ? F22 U6D 601 B 1 HETATM 30 F F29 U6D . . . J 3 8.996 12.383 5.955 1 81.06 ? F29 U6D 601 B 1 HETATM 31 F F38 U6D . . . J 3 1.529 12.617 -3.53 1 78.32 ? F38 U6D 601 B 1 HETATM 32 F F39 U6D . . . J 3 10.761 12.338 1.575 1 55.41 ? F39 U6D 601 B 1 HETATM 33 N N12 U6D . . . J 3 11.187 15.115 3.222 1 49.3 ? N12 U6D 601 B 1 HETATM 34 N N17 U6D . . . J 3 12.254 11.75 4.699 1 57.68 ? N17 U6D 601 B 1 HETATM 35 N N33 U6D . . . J 3 3.832 11.302 -0.421 1 56.61 ? N33 U6D 601 B 1 HETATM 36 O O30 U6D . . . J 3 6.242 11.121 2.202 1 30.07 ? O30 U6D 601 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 36 #