data_6WP1
#
_model_server_result.job_id            nxClgRGE7bOWbk3k3nF_TQ 
_model_server_result.datetime_utc      '2024-11-17 07:42:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wp1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":204}' 
#
_entry.id    6WP1 
#
_exptl.entry_id    6WP1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6WP1 
_cell.length_a            69.831 
_cell.length_b            78.466 
_cell.length_c            178.887 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WP1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,R,S,T,X,Y 1 1 
B,C,D,G,H,I,J,K,L,M,N,O,P,Q,U,V,W 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 P N N 
? 3 Q N N 
? 3 S N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 135 n n 
C1 C2 GOL sing 136 n n 
C1 H11 GOL sing 137 n n 
C1 H12 GOL sing 138 n n 
O1 HO1 GOL sing 139 n n 
C2 O2 GOL sing 140 n n 
C2 C3 GOL sing 141 n n 
C2 H2 GOL sing 142 n n 
O2 HO2 GOL sing 143 n n 
C3 O3 GOL sing 144 n n 
C3 H31 GOL sing 145 n n 
C3 H32 GOL sing 146 n n 
O3 HO3 GOL sing 147 n n 
#
_atom_sites.entry_id                     6WP1 
_atom_sites.fract_transf_matrix[1][1]    0.01432 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012744 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00559 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 ACT B 1 201 201 ACT ACT . 
H 2 ACT B 1 202 301 ACT ACT . 
I 3 GOL B 1 203 6 GOL GOL . 
J 3 GOL B 1 204 9 GOL GOL . 
K 3 GOL C 1 201 1 GOL GOL . 
L 3 GOL C 1 202 3 GOL GOL . 
M 3 GOL C 1 203 4 GOL GOL . 
N 2 ACT D 1 201 201 ACT ACT . 
O 2 ACT D 1 202 401 ACT ACT . 
P 3 GOL D 1 203 5 GOL GOL . 
Q 3 GOL D 1 204 7 GOL GOL . 
R 2 ACT E 1 301 301 ACT ACT . 
S 3 GOL E 1 302 2 GOL GOL . 
T 4 HOH A 1 201 36 HOH HOH . 
T 4 HOH A 2 202 32 HOH HOH . 
U 4 HOH B 1 301 18 HOH HOH . 
U 4 HOH B 2 302 37 HOH HOH . 
U 4 HOH B 3 303 19 HOH HOH . 
U 4 HOH B 4 304 21 HOH HOH . 
V 4 HOH C 1 301 40 HOH HOH . 
V 4 HOH C 2 302 1 HOH HOH . 
V 4 HOH C 3 303 38 HOH HOH . 
V 4 HOH C 4 304 17 HOH HOH . 
V 4 HOH C 5 305 22 HOH HOH . 
V 4 HOH C 6 306 20 HOH HOH . 
V 4 HOH C 7 307 15 HOH HOH . 
V 4 HOH C 8 308 16 HOH HOH . 
V 4 HOH C 9 309 39 HOH HOH . 
V 4 HOH C 10 310 14 HOH HOH . 
V 4 HOH C 11 311 42 HOH HOH . 
V 4 HOH C 12 312 13 HOH HOH . 
W 4 HOH D 1 301 24 HOH HOH . 
W 4 HOH D 2 302 28 HOH HOH . 
W 4 HOH D 3 303 26 HOH HOH . 
W 4 HOH D 4 304 30 HOH HOH . 
W 4 HOH D 5 305 11 HOH HOH . 
W 4 HOH D 6 306 27 HOH HOH . 
W 4 HOH D 7 307 23 HOH HOH . 
W 4 HOH D 8 308 25 HOH HOH . 
W 4 HOH D 9 309 10 HOH HOH . 
X 4 HOH E 1 401 47 HOH HOH . 
X 4 HOH E 2 402 44 HOH HOH . 
X 4 HOH E 3 403 12 HOH HOH . 
Y 4 HOH F 1 201 46 HOH HOH . 
Y 4 HOH F 2 202 35 HOH HOH . 
Y 4 HOH F 3 203 7 HOH HOH . 
Y 4 HOH F 4 204 45 HOH HOH . 
Y 4 HOH F 5 205 33 HOH HOH . 
Y 4 HOH F 6 206 29 HOH HOH . 
Y 4 HOH F 7 207 31 HOH HOH . 
Y 4 HOH F 8 208 34 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . J 3 -9.073 91.368 -5.479 1 47.66 ? C1 GOL 204 B 1 
HETATM 2 O O1 GOL . . . J 3 -9.468 91.727 -6.765 1 37.52 ? O1 GOL 204 B 1 
HETATM 3 C C2 GOL . . . J 3 -7.547 91.122 -5.53 1 52.78 ? C2 GOL 204 B 1 
HETATM 4 O O2 GOL . . . J 3 -6.835 92.296 -5.737 1 42.81 ? O2 GOL 204 B 1 
HETATM 5 C C3 GOL . . . J 3 -7.346 90.102 -6.675 1 50.42 ? C3 GOL 204 B 1 
HETATM 6 O O3 GOL . . . J 3 -8.128 88.991 -6.364 1 32.77 ? O3 GOL 204 B 1 
#
_model_server_stats.io_time_ms              28 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    36 
_model_server_stats.query_time_ms           366 
_model_server_stats.encode_time_ms          21 
_model_server_stats.element_count           6 
#