data_6WP6
#
_model_server_result.job_id            Kfx39Zd66fP-nbYiEAoQzg 
_model_server_result.datetime_utc      '2024-11-23 20:50:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wp6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":602}' 
#
_entry.id    6WP6 
#
_exptl.entry_id    6WP6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.27 
_cell.angle_gamma         90 
_cell.entry_id            6WP6 
_cell.length_a            113.065 
_cell.length_b            92.924 
_cell.length_c            109.391 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WP6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_558 -x,y,-z+3 -1 0 0 0 1 0 0 0 -1 -24.434643 0 327.262076 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 291 C GLU 272 1_555 D MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
metalc ? metalc2 A OD1 ASP 315 C ASP 296 1_555 D MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc3 D MG MG . C MG 602 1_555 E O1 OXL . C OXL 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? 
metalc ? metalc4 D MG MG . C MG 602 1_555 E O2 OXL . C OXL 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? 
metalc ? metalc5 D MG MG . C MG 602 1_555 J O HOH . C HOH 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc6 D MG MG . C MG 602 1_555 J O HOH . C HOH 727 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? 
metalc ? metalc7 B OD1 ASN 94 A ASN 75 1_555 G MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? 
metalc ? metalc8 B OG SER 96 A SER 77 1_555 G MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? 
metalc ? metalc9 B OD1 ASP 132 A ASP 113 1_555 G MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? 
metalc ? metalc10 B O THR 133 A THR 114 1_555 G MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.81 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6WP6 
_atom_sites.fract_transf_matrix[1][1]    0.008844 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00066 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010761 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009167 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NO3 C 1 601 601 NO3 NO3 . 
D 3 MG C 1 602 1 MG MG . 
E 4 OXL C 1 603 1 OXL OXL . 
F 5 GOL C 1 604 1 GOL GOL . 
G 3 MG A 1 601 2 MG MG . 
H 5 GOL A 1 602 2 GOL GOL . 
I 5 GOL A 1 603 3 GOL GOL . 
J 6 HOH C 1 701 6 HOH HOH . 
J 6 HOH C 2 702 2 HOH HOH . 
J 6 HOH C 3 703 35 HOH HOH . 
J 6 HOH C 4 704 39 HOH HOH . 
J 6 HOH C 5 705 41 HOH HOH . 
J 6 HOH C 6 706 74 HOH HOH . 
J 6 HOH C 7 707 30 HOH HOH . 
J 6 HOH C 8 708 43 HOH HOH . 
J 6 HOH C 9 709 9 HOH HOH . 
J 6 HOH C 10 710 29 HOH HOH . 
J 6 HOH C 11 711 17 HOH HOH . 
J 6 HOH C 12 712 15 HOH HOH . 
J 6 HOH C 13 713 44 HOH HOH . 
J 6 HOH C 14 714 24 HOH HOH . 
J 6 HOH C 15 715 7 HOH HOH . 
J 6 HOH C 16 716 1 HOH HOH . 
J 6 HOH C 17 717 27 HOH HOH . 
J 6 HOH C 18 718 26 HOH HOH . 
J 6 HOH C 19 719 33 HOH HOH . 
J 6 HOH C 20 720 14 HOH HOH . 
J 6 HOH C 21 721 34 HOH HOH . 
J 6 HOH C 22 722 22 HOH HOH . 
J 6 HOH C 23 723 12 HOH HOH . 
J 6 HOH C 24 724 16 HOH HOH . 
J 6 HOH C 25 725 73 HOH HOH . 
J 6 HOH C 26 726 25 HOH HOH . 
J 6 HOH C 27 727 40 HOH HOH . 
J 6 HOH C 28 728 28 HOH HOH . 
J 6 HOH C 29 729 21 HOH HOH . 
J 6 HOH C 30 730 38 HOH HOH . 
J 6 HOH C 31 731 42 HOH HOH . 
J 6 HOH C 32 732 77 HOH HOH . 
K 6 HOH A 1 701 57 HOH HOH . 
K 6 HOH A 2 702 13 HOH HOH . 
K 6 HOH A 3 703 64 HOH HOH . 
K 6 HOH A 4 704 70 HOH HOH . 
K 6 HOH A 5 705 50 HOH HOH . 
K 6 HOH A 6 706 72 HOH HOH . 
K 6 HOH A 7 707 55 HOH HOH . 
K 6 HOH A 8 708 67 HOH HOH . 
K 6 HOH A 9 709 32 HOH HOH . 
K 6 HOH A 10 710 52 HOH HOH . 
K 6 HOH A 11 711 59 HOH HOH . 
K 6 HOH A 12 712 53 HOH HOH . 
K 6 HOH A 13 713 58 HOH HOH . 
K 6 HOH A 14 714 45 HOH HOH . 
K 6 HOH A 15 715 76 HOH HOH . 
K 6 HOH A 16 716 69 HOH HOH . 
K 6 HOH A 17 717 71 HOH HOH . 
K 6 HOH A 18 718 68 HOH HOH . 
K 6 HOH A 19 719 75 HOH HOH . 
K 6 HOH A 20 720 60 HOH HOH . 
K 6 HOH A 21 721 54 HOH HOH . 
K 6 HOH A 22 722 51 HOH HOH . 
K 6 HOH A 23 723 56 HOH HOH . 
K 6 HOH A 24 724 61 HOH HOH . 
K 6 HOH A 25 725 62 HOH HOH . 
K 6 HOH A 26 726 47 HOH HOH . 
K 6 HOH A 27 727 49 HOH HOH . 
K 6 HOH A 28 728 65 HOH HOH . 
K 6 HOH A 29 729 37 HOH HOH . 
K 6 HOH A 30 730 48 HOH HOH . 
K 6 HOH A 31 731 46 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               10.996 
_atom_site.Cartn_y               20.371 
_atom_site.Cartn_z               136.149 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        42.11 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           602 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#