data_6WPP # _model_server_result.job_id AMvCCM0mOsu-iCqNyuutoA _model_server_result.datetime_utc '2025-08-01 05:47:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wpp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 6WPP # _exptl.entry_id 6WPP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.228 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-fluoro-N-methyl-2-(7H-pyrrolo[2,3-d]pyrimidin-5-yl)pyrimidin-4-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.43 _cell.angle_gamma 90 _cell.entry_id 6WPP _cell.length_a 60.483 _cell.length_b 81.521 _cell.length_c 78.42 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WPP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C11 H9 F N6' _chem_comp.formula_weight 244.228 _chem_comp.id PZ4 _chem_comp.mon_nstd_flag . _chem_comp.name 5-fluoro-N-methyl-2-(7H-pyrrolo[2,3-d]pyrimidin-5-yl)pyrimidin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F9 C8 PZ4 sing 277 n n C7 C8 PZ4 doub 278 n y C7 N6 PZ4 sing 279 n y C8 C3 PZ4 sing 280 n y N6 C5 PZ4 doub 281 n y C3 N2 PZ4 sing 282 n n C3 N4 PZ4 doub 283 n y N2 C1 PZ4 sing 284 n n C5 N4 PZ4 sing 285 n y C5 C10 PZ4 sing 286 n n C11 C10 PZ4 doub 287 n y C11 N12 PZ4 sing 288 n y C10 C18 PZ4 sing 289 n y N12 C13 PZ4 sing 290 n y C18 C13 PZ4 doub 291 n y C18 C17 PZ4 sing 292 n y C13 N14 PZ4 sing 293 n y C17 N16 PZ4 doub 294 n y N14 C15 PZ4 doub 295 n y N16 C15 PZ4 sing 296 n y C1 H1 PZ4 sing 297 n n C1 H2 PZ4 sing 298 n n C1 H3 PZ4 sing 299 n n C7 H4 PZ4 sing 300 n n C11 H5 PZ4 sing 301 n n C15 H6 PZ4 sing 302 n n C17 H7 PZ4 sing 303 n n N2 H8 PZ4 sing 304 n n N12 H9 PZ4 sing 305 n n # _atom_sites.entry_id 6WPP _atom_sites.fract_transf_matrix[1][1] 0.016534 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00649 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012267 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013699 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PZ4 A 1 701 1 PZ4 INX . D 2 PZ4 B 1 701 2 PZ4 INX . E 3 HOH A 1 801 47 HOH HOH . E 3 HOH A 2 802 111 HOH HOH . E 3 HOH A 3 803 50 HOH HOH . E 3 HOH A 4 804 80 HOH HOH . E 3 HOH A 5 805 86 HOH HOH . E 3 HOH A 6 806 1 HOH HOH . E 3 HOH A 7 807 46 HOH HOH . E 3 HOH A 8 808 7 HOH HOH . E 3 HOH A 9 809 54 HOH HOH . E 3 HOH A 10 810 58 HOH HOH . E 3 HOH A 11 811 85 HOH HOH . E 3 HOH A 12 812 55 HOH HOH . E 3 HOH A 13 813 81 HOH HOH . E 3 HOH A 14 814 20 HOH HOH . E 3 HOH A 15 815 19 HOH HOH . E 3 HOH A 16 816 57 HOH HOH . E 3 HOH A 17 817 44 HOH HOH . E 3 HOH A 18 818 53 HOH HOH . E 3 HOH A 19 819 9 HOH HOH . E 3 HOH A 20 820 23 HOH HOH . E 3 HOH A 21 821 41 HOH HOH . E 3 HOH A 22 822 93 HOH HOH . E 3 HOH A 23 823 92 HOH HOH . E 3 HOH A 24 824 60 HOH HOH . E 3 HOH A 25 825 45 HOH HOH . E 3 HOH A 26 826 113 HOH HOH . E 3 HOH A 27 827 15 HOH HOH . E 3 HOH A 28 828 42 HOH HOH . E 3 HOH A 29 829 43 HOH HOH . E 3 HOH A 30 830 22 HOH HOH . E 3 HOH A 31 831 2 HOH HOH . E 3 HOH A 32 832 110 HOH HOH . E 3 HOH A 33 833 108 HOH HOH . E 3 HOH A 34 834 51 HOH HOH . E 3 HOH A 35 835 17 HOH HOH . E 3 HOH A 36 836 48 HOH HOH . E 3 HOH A 37 837 61 HOH HOH . E 3 HOH A 38 838 52 HOH HOH . E 3 HOH A 39 839 4 HOH HOH . E 3 HOH A 40 840 5 HOH HOH . E 3 HOH A 41 841 78 HOH HOH . E 3 HOH A 42 842 96 HOH HOH . E 3 HOH A 43 843 49 HOH HOH . E 3 HOH A 44 844 18 HOH HOH . E 3 HOH A 45 845 56 HOH HOH . E 3 HOH A 46 846 16 HOH HOH . E 3 HOH A 47 847 28 HOH HOH . E 3 HOH A 48 848 90 HOH HOH . E 3 HOH A 49 849 91 HOH HOH . E 3 HOH A 50 850 62 HOH HOH . E 3 HOH A 51 851 82 HOH HOH . E 3 HOH A 52 852 13 HOH HOH . E 3 HOH A 53 853 10 HOH HOH . E 3 HOH A 54 854 11 HOH HOH . E 3 HOH A 55 855 6 HOH HOH . E 3 HOH A 56 856 79 HOH HOH . E 3 HOH A 57 857 77 HOH HOH . E 3 HOH A 58 858 12 HOH HOH . E 3 HOH A 59 859 89 HOH HOH . E 3 HOH A 60 860 109 HOH HOH . E 3 HOH A 61 861 107 HOH HOH . E 3 HOH A 62 862 64 HOH HOH . E 3 HOH A 63 863 95 HOH HOH . E 3 HOH A 64 864 63 HOH HOH . E 3 HOH A 65 865 97 HOH HOH . E 3 HOH A 66 866 65 HOH HOH . E 3 HOH A 67 867 94 HOH HOH . E 3 HOH A 68 868 59 HOH HOH . F 3 HOH B 1 801 24 HOH HOH . F 3 HOH B 2 802 73 HOH HOH . F 3 HOH B 3 803 30 HOH HOH . F 3 HOH B 4 804 102 HOH HOH . F 3 HOH B 5 805 104 HOH HOH . F 3 HOH B 6 806 14 HOH HOH . F 3 HOH B 7 807 72 HOH HOH . F 3 HOH B 8 808 67 HOH HOH . F 3 HOH B 9 809 106 HOH HOH . F 3 HOH B 10 810 115 HOH HOH . F 3 HOH B 11 811 31 HOH HOH . F 3 HOH B 12 812 68 HOH HOH . F 3 HOH B 13 813 8 HOH HOH . F 3 HOH B 14 814 99 HOH HOH . F 3 HOH B 15 815 29 HOH HOH . F 3 HOH B 16 816 71 HOH HOH . F 3 HOH B 17 817 40 HOH HOH . F 3 HOH B 18 818 3 HOH HOH . F 3 HOH B 19 819 100 HOH HOH . F 3 HOH B 20 820 70 HOH HOH . F 3 HOH B 21 821 105 HOH HOH . F 3 HOH B 22 822 34 HOH HOH . F 3 HOH B 23 823 21 HOH HOH . F 3 HOH B 24 824 83 HOH HOH . F 3 HOH B 25 825 112 HOH HOH . F 3 HOH B 26 826 98 HOH HOH . F 3 HOH B 27 827 88 HOH HOH . F 3 HOH B 28 828 35 HOH HOH . F 3 HOH B 29 829 69 HOH HOH . F 3 HOH B 30 830 87 HOH HOH . F 3 HOH B 31 831 66 HOH HOH . F 3 HOH B 32 832 32 HOH HOH . F 3 HOH B 33 833 26 HOH HOH . F 3 HOH B 34 834 27 HOH HOH . F 3 HOH B 35 835 36 HOH HOH . F 3 HOH B 36 836 101 HOH HOH . F 3 HOH B 37 837 37 HOH HOH . F 3 HOH B 38 838 84 HOH HOH . F 3 HOH B 39 839 118 HOH HOH . F 3 HOH B 40 840 103 HOH HOH . F 3 HOH B 41 841 76 HOH HOH . F 3 HOH B 42 842 114 HOH HOH . F 3 HOH B 43 843 117 HOH HOH . F 3 HOH B 44 844 25 HOH HOH . F 3 HOH B 45 845 74 HOH HOH . F 3 HOH B 46 846 33 HOH HOH . F 3 HOH B 47 847 75 HOH HOH . F 3 HOH B 48 848 116 HOH HOH . F 3 HOH B 49 849 38 HOH HOH . F 3 HOH B 50 850 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PZ4 . . . C 2 -14.09 -7.391 25.549 1 33.92 ? C1 PZ4 701 A 1 HETATM 2 C C3 PZ4 . . . C 2 -11.895 -6.794 24.549 1 35.98 ? C3 PZ4 701 A 1 HETATM 3 C C5 PZ4 . . . C 2 -9.934 -8.099 24.898 1 34.27 ? C5 PZ4 701 A 1 HETATM 4 C C7 PZ4 . . . C 2 -9.947 -6.562 23.154 1 35.94 ? C7 PZ4 701 A 1 HETATM 5 C C8 PZ4 . . . C 2 -11.248 -6.178 23.475 1 39.22 ? C8 PZ4 701 A 1 HETATM 6 C C11 PZ4 . . . C 2 -7.894 -9.539 25.349 1 29.94 ? C11 PZ4 701 A 1 HETATM 7 C C15 PZ4 . . . C 2 -9.644 -11.786 28.78 1 29.32 ? C15 PZ4 701 A 1 HETATM 8 C C17 PZ4 . . . C 2 -10.747 -10.135 27.594 1 31.57 ? C17 PZ4 701 A 1 HETATM 9 C C18 PZ4 . . . C 2 -9.614 -9.964 26.782 1 30.83 ? C18 PZ4 701 A 1 HETATM 10 N N2 PZ4 . . . C 2 -13.178 -6.441 24.896 1 38.77 ? N2 PZ4 701 A 1 HETATM 11 N N4 PZ4 . . . C 2 -11.217 -7.755 25.244 1 36.15 ? N4 PZ4 701 A 1 HETATM 12 N N6 PZ4 . . . C 2 -9.331 -7.496 23.87 1 33.7 ? N6 PZ4 701 A 1 HETATM 13 F F9 PZ4 . . . C 2 -11.873 -5.232 22.749 1 44.75 ? F9 PZ4 701 A 1 HETATM 14 C C10 PZ4 . . . C 2 -9.2 -9.13 25.637 1 31.26 ? C10 PZ4 701 A 1 HETATM 15 N N12 PZ4 . . . C 2 -7.529 -10.479 26.184 1 29.29 ? N12 PZ4 701 A 1 HETATM 16 C C13 PZ4 . . . C 2 -8.481 -10.789 27.053 1 27.27 ? C13 PZ4 701 A 1 HETATM 17 N N14 PZ4 . . . C 2 -8.55 -11.672 28.057 1 28.54 ? N14 PZ4 701 A 1 HETATM 18 N N16 PZ4 . . . C 2 -10.717 -11.041 28.563 1 32.5 ? N16 PZ4 701 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #