data_6WRR # _model_server_result.job_id mc25SIkJYgytrjFiZ2FxJA _model_server_result.datetime_utc '2024-11-28 01:39:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wrr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6WRR # _exptl.entry_id 6WRR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 157.25 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GADOLINIUM ATOM' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WRR _cell.length_a 51.64 _cell.length_b 51.64 _cell.length_c 143.33 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WRR _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 54 A ASP 54 1_555 C GD GD . A GD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc2 A OE2 GLU 79 A GLU 79 1_555 B GD GD . A GD 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc3 A OE1 GLU 79 A GLU 79 1_555 C GD GD . A GD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.287 ? metalc ? metalc4 A OE2 GLU 80 A GLU 80 1_555 C GD GD . A GD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc5 A OD2 ASP 153 A ASP 153 1_555 B GD GD . A GD 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc6 A OD1 ASP 156 A ASP 156 1_555 B GD GD . A GD 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc7 A OD1 ASP 317 A ASP 317 1_555 B GD GD . A GD 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc8 B GD GD . A GD 501 1_555 E O1 SO4 . A SO4 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc9 B GD GD . A GD 501 1_555 E O2 SO4 . A SO4 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc10 B GD GD . A GD 501 1_555 F O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc11 B GD GD . A GD 501 1_555 F O HOH . A HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc12 C GD GD . A GD 502 1_555 F O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? # _chem_comp.formula Gd _chem_comp.formula_weight 157.25 _chem_comp.id GD _chem_comp.mon_nstd_flag . _chem_comp.name 'GADOLINIUM ATOM' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6WRR _atom_sites.fract_transf_matrix[1][1] 0.019365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019365 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006977 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GD A 1 501 1 GD GD . C 2 GD A 1 502 2 GD GD . D 3 SO4 A 1 503 1 SO4 SO4 . E 3 SO4 A 1 504 2 SO4 SO4 . F 4 HOH A 1 601 6 HOH HOH . F 4 HOH A 2 602 70 HOH HOH . F 4 HOH A 3 603 29 HOH HOH . F 4 HOH A 4 604 74 HOH HOH . F 4 HOH A 5 605 57 HOH HOH . F 4 HOH A 6 606 82 HOH HOH . F 4 HOH A 7 607 49 HOH HOH . F 4 HOH A 8 608 13 HOH HOH . F 4 HOH A 9 609 73 HOH HOH . F 4 HOH A 10 610 19 HOH HOH . F 4 HOH A 11 611 5 HOH HOH . F 4 HOH A 12 612 9 HOH HOH . F 4 HOH A 13 613 68 HOH HOH . F 4 HOH A 14 614 2 HOH HOH . F 4 HOH A 15 615 1 HOH HOH . F 4 HOH A 16 616 80 HOH HOH . F 4 HOH A 17 617 3 HOH HOH . F 4 HOH A 18 618 24 HOH HOH . F 4 HOH A 19 619 35 HOH HOH . F 4 HOH A 20 620 15 HOH HOH . F 4 HOH A 21 621 7 HOH HOH . F 4 HOH A 22 622 71 HOH HOH . F 4 HOH A 23 623 26 HOH HOH . F 4 HOH A 24 624 10 HOH HOH . F 4 HOH A 25 625 30 HOH HOH . F 4 HOH A 26 626 37 HOH HOH . F 4 HOH A 27 627 44 HOH HOH . F 4 HOH A 28 628 43 HOH HOH . F 4 HOH A 29 629 16 HOH HOH . F 4 HOH A 30 630 81 HOH HOH . F 4 HOH A 31 631 78 HOH HOH . F 4 HOH A 32 632 39 HOH HOH . F 4 HOH A 33 633 4 HOH HOH . F 4 HOH A 34 634 50 HOH HOH . F 4 HOH A 35 635 36 HOH HOH . F 4 HOH A 36 636 21 HOH HOH . F 4 HOH A 37 637 22 HOH HOH . F 4 HOH A 38 638 8 HOH HOH . F 4 HOH A 39 639 12 HOH HOH . F 4 HOH A 40 640 75 HOH HOH . F 4 HOH A 41 641 23 HOH HOH . F 4 HOH A 42 642 42 HOH HOH . F 4 HOH A 43 643 38 HOH HOH . F 4 HOH A 44 644 32 HOH HOH . F 4 HOH A 45 645 11 HOH HOH . F 4 HOH A 46 646 27 HOH HOH . F 4 HOH A 47 647 17 HOH HOH . F 4 HOH A 48 648 34 HOH HOH . F 4 HOH A 49 649 18 HOH HOH . F 4 HOH A 50 650 40 HOH HOH . F 4 HOH A 51 651 41 HOH HOH . F 4 HOH A 52 652 59 HOH HOH . F 4 HOH A 53 653 45 HOH HOH . F 4 HOH A 54 654 54 HOH HOH . F 4 HOH A 55 655 61 HOH HOH . F 4 HOH A 56 656 33 HOH HOH . F 4 HOH A 57 657 47 HOH HOH . F 4 HOH A 58 658 25 HOH HOH . F 4 HOH A 59 659 79 HOH HOH . F 4 HOH A 60 660 85 HOH HOH . F 4 HOH A 61 661 28 HOH HOH . F 4 HOH A 62 662 55 HOH HOH . F 4 HOH A 63 663 56 HOH HOH . F 4 HOH A 64 664 20 HOH HOH . F 4 HOH A 65 665 58 HOH HOH . F 4 HOH A 66 666 31 HOH HOH . F 4 HOH A 67 667 84 HOH HOH . F 4 HOH A 68 668 51 HOH HOH . F 4 HOH A 69 669 46 HOH HOH . F 4 HOH A 70 670 69 HOH HOH . F 4 HOH A 71 671 67 HOH HOH . F 4 HOH A 72 672 83 HOH HOH . F 4 HOH A 73 673 65 HOH HOH . F 4 HOH A 74 674 53 HOH HOH . F 4 HOH A 75 675 72 HOH HOH . F 4 HOH A 76 676 66 HOH HOH . F 4 HOH A 77 677 14 HOH HOH . F 4 HOH A 78 678 52 HOH HOH . F 4 HOH A 79 679 62 HOH HOH . F 4 HOH A 80 680 77 HOH HOH . F 4 HOH A 81 681 64 HOH HOH . F 4 HOH A 82 682 60 HOH HOH . F 4 HOH A 83 683 48 HOH HOH . F 4 HOH A 84 684 76 HOH HOH . F 4 HOH A 85 685 63 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol GD _atom_site.label_atom_id GD _atom_site.label_comp_id GD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -8.837 _atom_site.Cartn_y 15.781 _atom_site.Cartn_z 35.724 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.3 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id GD _atom_site.auth_comp_id GD _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #