data_6WRY
#
_model_server_result.job_id            RB-MP31tnz2apYnbisUy8Q 
_model_server_result.datetime_utc      '2024-11-18 01:46:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wry 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    6WRY 
#
_exptl.entry_id    6WRY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              157.25 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'GADOLINIUM ATOM' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6WRY 
_cell.length_a            51.64 
_cell.length_b            51.64 
_cell.length_c            143.33 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WRY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 26 A GLU 26 1_555 F GD GD . A GD 405 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc2 A OD2 ASP 54 A ASP 54 1_555 E GD GD . A GD 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? 
metalc ? metalc3 A OE2 GLU 66 A GLU 66 1_555 F GD GD . A GD 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.076 ? 
metalc ? metalc4 A OE2 GLU 79 A GLU 79 1_555 E GD GD . A GD 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? 
metalc ? metalc5 A OE2 GLU 80 A GLU 80 1_555 E GD GD . A GD 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? 
metalc ? metalc6 A OE1 GLU 140 A GLU 140 1_555 G GD GD . A GD 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.985 ? 
metalc ? metalc7 A OE2 GLU 140 A GLU 140 1_555 G GD GD . A GD 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? 
metalc ? metalc8 A OD2 ASP 153 A ASP 153 1_555 D GD GD . A GD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? 
metalc ? metalc9 A OD1 ASP 156 A ASP 156 1_555 D GD GD . A GD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc10 A OD1 ASP 317 A ASP 317 1_555 D GD GD . A GD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc11 C O2 SO4 . A SO4 402 1_555 D GD GD . A GD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? 
metalc ? metalc12 C O4 SO4 . A SO4 402 1_555 D GD GD . A GD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? 
metalc ? metalc13 D GD GD . A GD 403 1_555 H O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? 
#
_chem_comp.formula           Gd 
_chem_comp.formula_weight    157.25 
_chem_comp.id                GD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'GADOLINIUM ATOM' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6WRY 
_atom_sites.fract_transf_matrix[1][1]    0.019365 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019365 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006977 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 401 1 SO4 SO4 . 
C 2 SO4 A 1 402 2 SO4 SO4 . 
D 3 GD A 1 403 1 GD GD . 
E 3 GD A 1 404 2 GD GD . 
F 3 GD A 1 405 3 GD GD . 
G 3 GD A 1 406 4 GD GD . 
H 4 HOH A 1 501 3 HOH HOH . 
H 4 HOH A 2 502 11 HOH HOH . 
H 4 HOH A 3 503 5 HOH HOH . 
H 4 HOH A 4 504 2 HOH HOH . 
H 4 HOH A 5 505 17 HOH HOH . 
H 4 HOH A 6 506 19 HOH HOH . 
H 4 HOH A 7 507 31 HOH HOH . 
H 4 HOH A 8 508 26 HOH HOH . 
H 4 HOH A 9 509 23 HOH HOH . 
H 4 HOH A 10 510 24 HOH HOH . 
H 4 HOH A 11 511 6 HOH HOH . 
H 4 HOH A 12 512 9 HOH HOH . 
H 4 HOH A 13 513 18 HOH HOH . 
H 4 HOH A 14 514 7 HOH HOH . 
H 4 HOH A 15 515 35 HOH HOH . 
H 4 HOH A 16 516 4 HOH HOH . 
H 4 HOH A 17 517 13 HOH HOH . 
H 4 HOH A 18 518 1 HOH HOH . 
H 4 HOH A 19 519 40 HOH HOH . 
H 4 HOH A 20 520 32 HOH HOH . 
H 4 HOH A 21 521 10 HOH HOH . 
H 4 HOH A 22 522 37 HOH HOH . 
H 4 HOH A 23 523 8 HOH HOH . 
H 4 HOH A 24 524 21 HOH HOH . 
H 4 HOH A 25 525 33 HOH HOH . 
H 4 HOH A 26 526 25 HOH HOH . 
H 4 HOH A 27 527 14 HOH HOH . 
H 4 HOH A 28 528 29 HOH HOH . 
H 4 HOH A 29 529 12 HOH HOH . 
H 4 HOH A 30 530 38 HOH HOH . 
H 4 HOH A 31 531 20 HOH HOH . 
H 4 HOH A 32 532 27 HOH HOH . 
H 4 HOH A 33 533 22 HOH HOH . 
H 4 HOH A 34 534 30 HOH HOH . 
H 4 HOH A 35 535 15 HOH HOH . 
H 4 HOH A 36 536 16 HOH HOH . 
H 4 HOH A 37 537 39 HOH HOH . 
H 4 HOH A 38 538 28 HOH HOH . 
H 4 HOH A 39 539 36 HOH HOH . 
H 4 HOH A 40 540 34 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           GD 
_atom_site.label_atom_id         GD 
_atom_site.label_comp_id         GD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -15.959 
_atom_site.Cartn_y               -9.029 
_atom_site.Cartn_z               -0.113 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        15.65 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          GD 
_atom_site.auth_comp_id          GD 
_atom_site.auth_seq_id           403 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           419 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#