data_6WTN # _model_server_result.job_id kYpGtKsVB7vOY4f5T6tsZg _model_server_result.datetime_utc '2024-10-11 00:31:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wtn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1204}' # _entry.id 6WTN # _exptl.entry_id 6WTN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.365 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R)-3-cyclopentyl-3-[4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6WTN _cell.length_a 78.85 _cell.length_b 78.85 _cell.length_c 84.827 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WTN _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 173 A GLU 1006 1_555 A N PTR 174 A PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale2 A C PTR 174 A PTR 1007 1_555 A N PTR 175 A PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C PTR 175 A PTR 1008 1_555 A N LYS 176 A LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C17 H18 N6' _chem_comp.formula_weight 306.365 _chem_comp.id RXT _chem_comp.mon_nstd_flag . _chem_comp.name (3R)-3-cyclopentyl-3-[4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Ruxolitinib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAE NAM RXT doub 315 n y CAE NAP RXT sing 316 n y NAM CAR RXT sing 317 n y NAP CAT RXT doub 318 n y CAF CAQ RXT sing 319 n y CAF NAO RXT doub 320 n y CAR CAQ RXT sing 321 n n CAR CAS RXT doub 322 n y CAQ CAG RXT doub 323 n y NAO NAW RXT sing 324 n y CAT CAS RXT sing 325 n y CAT NAN RXT sing 326 n y CAS CAD RXT sing 327 n y NAN CAC RXT sing 328 n y NAW CAG RXT sing 329 n y NAW CAV RXT sing 330 n n CAJ CAB RXT sing 331 n n CAJ CAV RXT sing 332 n n CAD CAC RXT doub 333 n y CAB NAA RXT trip 334 n n CAV CAU RXT sing 335 n n CAL CAI RXT sing 336 n n CAL CAU RXT sing 337 n n CAI CAH RXT sing 338 n n CAU CAK RXT sing 339 n n CAH CAK RXT sing 340 n n CAK H1 RXT sing 341 n n CAK H2 RXT sing 342 n n CAH H3 RXT sing 343 n n CAH H4 RXT sing 344 n n CAI H5 RXT sing 345 n n CAI H6 RXT sing 346 n n CAL H7 RXT sing 347 n n CAL H8 RXT sing 348 n n CAU H9 RXT sing 349 n n CAV H10 RXT sing 350 n n CAJ H11 RXT sing 351 n n CAJ H12 RXT sing 352 n n CAG H18 RXT sing 353 n n CAF H19 RXT sing 354 n n CAE H20 RXT sing 355 n n CAD H21 RXT sing 356 n n CAC H22 RXT sing 357 n n NAN H23 RXT sing 358 n n # _atom_sites.entry_id 6WTN _atom_sites.fract_transf_matrix[1][1] 0.012682 _atom_sites.fract_transf_matrix[1][2] 0.007322 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014644 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011789 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 1201 102 EDO EDO . C 2 EDO A 1 1202 103 EDO EDO . D 2 EDO A 1 1203 105 EDO EDO . E 3 RXT A 1 1204 1 RXT RXT . F 4 HOH A 1 1301 86 HOH HOH . F 4 HOH A 2 1302 41 HOH HOH . F 4 HOH A 3 1303 49 HOH HOH . F 4 HOH A 4 1304 59 HOH HOH . F 4 HOH A 5 1305 12 HOH HOH . F 4 HOH A 6 1306 76 HOH HOH . F 4 HOH A 7 1307 10 HOH HOH . F 4 HOH A 8 1308 83 HOH HOH . F 4 HOH A 9 1309 66 HOH HOH . F 4 HOH A 10 1310 80 HOH HOH . F 4 HOH A 11 1311 23 HOH HOH . F 4 HOH A 12 1312 79 HOH HOH . F 4 HOH A 13 1313 93 HOH HOH . F 4 HOH A 14 1314 34 HOH HOH . F 4 HOH A 15 1315 2 HOH HOH . F 4 HOH A 16 1316 82 HOH HOH . F 4 HOH A 17 1317 6 HOH HOH . F 4 HOH A 18 1318 18 HOH HOH . F 4 HOH A 19 1319 25 HOH HOH . F 4 HOH A 20 1320 53 HOH HOH . F 4 HOH A 21 1321 39 HOH HOH . F 4 HOH A 22 1322 33 HOH HOH . F 4 HOH A 23 1323 29 HOH HOH . F 4 HOH A 24 1324 74 HOH HOH . F 4 HOH A 25 1325 35 HOH HOH . F 4 HOH A 26 1326 61 HOH HOH . F 4 HOH A 27 1327 31 HOH HOH . F 4 HOH A 28 1328 67 HOH HOH . F 4 HOH A 29 1329 22 HOH HOH . F 4 HOH A 30 1330 95 HOH HOH . F 4 HOH A 31 1331 8 HOH HOH . F 4 HOH A 32 1332 17 HOH HOH . F 4 HOH A 33 1333 16 HOH HOH . F 4 HOH A 34 1334 37 HOH HOH . F 4 HOH A 35 1335 51 HOH HOH . F 4 HOH A 36 1336 19 HOH HOH . F 4 HOH A 37 1337 90 HOH HOH . F 4 HOH A 38 1338 9 HOH HOH . F 4 HOH A 39 1339 88 HOH HOH . F 4 HOH A 40 1340 7 HOH HOH . F 4 HOH A 41 1341 30 HOH HOH . F 4 HOH A 42 1342 55 HOH HOH . F 4 HOH A 43 1343 1 HOH HOH . F 4 HOH A 44 1344 42 HOH HOH . F 4 HOH A 45 1345 81 HOH HOH . F 4 HOH A 46 1346 4 HOH HOH . F 4 HOH A 47 1347 52 HOH HOH . F 4 HOH A 48 1348 3 HOH HOH . F 4 HOH A 49 1349 57 HOH HOH . F 4 HOH A 50 1350 13 HOH HOH . F 4 HOH A 51 1351 75 HOH HOH . F 4 HOH A 52 1352 26 HOH HOH . F 4 HOH A 53 1353 87 HOH HOH . F 4 HOH A 54 1354 20 HOH HOH . F 4 HOH A 55 1355 21 HOH HOH . F 4 HOH A 56 1356 44 HOH HOH . F 4 HOH A 57 1357 73 HOH HOH . F 4 HOH A 58 1358 15 HOH HOH . F 4 HOH A 59 1359 28 HOH HOH . F 4 HOH A 60 1360 27 HOH HOH . F 4 HOH A 61 1361 58 HOH HOH . F 4 HOH A 62 1362 70 HOH HOH . F 4 HOH A 63 1363 24 HOH HOH . F 4 HOH A 64 1364 63 HOH HOH . F 4 HOH A 65 1365 60 HOH HOH . F 4 HOH A 66 1366 65 HOH HOH . F 4 HOH A 67 1367 45 HOH HOH . F 4 HOH A 68 1368 56 HOH HOH . F 4 HOH A 69 1369 62 HOH HOH . F 4 HOH A 70 1370 32 HOH HOH . F 4 HOH A 71 1371 14 HOH HOH . F 4 HOH A 72 1372 50 HOH HOH . F 4 HOH A 73 1373 77 HOH HOH . F 4 HOH A 74 1374 36 HOH HOH . F 4 HOH A 75 1375 38 HOH HOH . F 4 HOH A 76 1376 54 HOH HOH . F 4 HOH A 77 1377 89 HOH HOH . F 4 HOH A 78 1378 85 HOH HOH . F 4 HOH A 79 1379 68 HOH HOH . F 4 HOH A 80 1380 71 HOH HOH . F 4 HOH A 81 1381 43 HOH HOH . F 4 HOH A 82 1382 92 HOH HOH . F 4 HOH A 83 1383 64 HOH HOH . F 4 HOH A 84 1384 47 HOH HOH . F 4 HOH A 85 1385 78 HOH HOH . F 4 HOH A 86 1386 5 HOH HOH . F 4 HOH A 87 1387 48 HOH HOH . F 4 HOH A 88 1388 40 HOH HOH . F 4 HOH A 89 1389 11 HOH HOH . F 4 HOH A 90 1390 46 HOH HOH . F 4 HOH A 91 1391 69 HOH HOH . F 4 HOH A 92 1392 91 HOH HOH . F 4 HOH A 93 1393 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAK RXT . . . E 3 22.136 11.35 4.696 1 31.94 ? CAK RXT 1204 A 1 HETATM 2 C CAH RXT . . . E 3 20.932 10.419 4.241 1 40.98 ? CAH RXT 1204 A 1 HETATM 3 C CAI RXT . . . E 3 19.643 11.042 4.932 1 41.39 ? CAI RXT 1204 A 1 HETATM 4 C CAL RXT . . . E 3 20.033 12.432 5.357 1 33.54 ? CAL RXT 1204 A 1 HETATM 5 C CAU RXT . . . E 3 21.554 12.494 5.545 1 30.72 ? CAU RXT 1204 A 1 HETATM 6 C CAV RXT . . . E 3 21.947 12.273 6.994 1 25.68 ? CAV RXT 1204 A 1 HETATM 7 C CAJ RXT . . . E 3 23.465 12.462 7.083 1 22.01 ? CAJ RXT 1204 A 1 HETATM 8 C CAB RXT . . . E 3 23.914 12.238 8.449 1 27.39 ? CAB RXT 1204 A 1 HETATM 9 N NAA RXT . . . E 3 24.323 12.1 9.502 1 28.86 ? NAA RXT 1204 A 1 HETATM 10 N NAW RXT . . . E 3 21.396 13.32 7.87 1 27.2 ? NAW RXT 1204 A 1 HETATM 11 C CAG RXT . . . E 3 20.987 13.153 9.145 1 29.01 ? CAG RXT 1204 A 1 HETATM 12 N NAO RXT . . . E 3 21.305 14.674 7.556 1 27.92 ? NAO RXT 1204 A 1 HETATM 13 C CAF RXT . . . E 3 20.813 15.307 8.623 1 30.56 ? CAF RXT 1204 A 1 HETATM 14 C CAQ RXT . . . E 3 20.587 14.38 9.611 1 29.35 ? CAQ RXT 1204 A 1 HETATM 15 C CAR RXT . . . E 3 20.114 14.675 10.987 1 28.81 ? CAR RXT 1204 A 1 HETATM 16 N NAM RXT . . . E 3 20.203 15.956 11.317 1 31.53 ? NAM RXT 1204 A 1 HETATM 17 C CAE RXT . . . E 3 19.834 16.3 12.578 1 31.96 ? CAE RXT 1204 A 1 HETATM 18 N NAP RXT . . . E 3 19.427 15.486 13.539 1 28.16 ? NAP RXT 1204 A 1 HETATM 19 C CAT RXT . . . E 3 19.35 14.175 13.215 1 28.29 ? CAT RXT 1204 A 1 HETATM 20 C CAS RXT . . . E 3 19.696 13.732 11.978 1 27 ? CAS RXT 1204 A 1 HETATM 21 C CAD RXT . . . E 3 19.528 12.366 11.967 1 30.17 ? CAD RXT 1204 A 1 HETATM 22 C CAC RXT . . . E 3 19.075 12 13.209 1 30.22 ? CAC RXT 1204 A 1 HETATM 23 N NAN RXT . . . E 3 18.979 13.116 13.961 1 30.7 ? NAN RXT 1204 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #