data_6WTP # _model_server_result.job_id rx-QMNWBJ0mM7jkgvqcKJw _model_server_result.datetime_utc '2024-11-29 13:04:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wtp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 6WTP # _exptl.entry_id 6WTP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 562.643 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'tert-butyl 4-[(4-{1-[3-(cyanomethyl)-1-(ethylsulfonyl)azetidin-3-yl]-1H-pyrazol-4-yl}-7H-pyrrolo[2,3-d]pyrimidin-2-yl)amino]benzoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6WTP _cell.length_a 80.517 _cell.length_b 80.517 _cell.length_c 85.165 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WTP _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 173 A GLU 1006 1_555 A N PTR 174 A PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C PTR 174 A PTR 1007 1_555 A N PTR 175 A PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C PTR 175 A PTR 1008 1_555 A N LYS 176 A LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C27 H30 N8 O4 S' _chem_comp.formula_weight 562.643 _chem_comp.id U8P _chem_comp.mon_nstd_flag . _chem_comp.name 'tert-butyl 4-[(4-{1-[3-(cyanomethyl)-1-(ethylsulfonyl)azetidin-3-yl]-1H-pyrazol-4-yl}-7H-pyrrolo[2,3-d]pyrimidin-2-yl)amino]benzoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 C01 U8P sing 400 n n C02 S03 U8P sing 401 n n O04 S03 U8P doub 402 n n S03 O40 U8P doub 403 n n S03 N05 U8P sing 404 n n N05 C06 U8P sing 405 n n N05 C08 U8P sing 406 n n C06 C07 U8P sing 407 n n C25 C22 U8P sing 408 n n C08 C07 U8P sing 409 n n C07 C37 U8P sing 410 n n C07 N09 U8P sing 411 n n N36 N09 U8P sing 412 n y N36 C35 U8P doub 413 n y C37 C38 U8P sing 414 n n C22 C24 U8P sing 415 n n C22 C23 U8P sing 416 n n C22 O21 U8P sing 417 n n N09 C10 U8P sing 418 n y O21 C20 U8P sing 419 n n C35 C11 U8P sing 420 n y C38 N39 U8P trip 421 n n C10 C11 U8P doub 422 n y C11 C12 U8P sing 423 n n C20 O26 U8P doub 424 n n C20 C19 U8P sing 425 n n C27 C19 U8P doub 426 n y C27 C28 U8P sing 427 n y C19 C18 U8P sing 428 n y C28 C16 U8P doub 429 n y C12 N13 U8P doub 430 n y C12 C31 U8P sing 431 n y N13 C14 U8P sing 432 n y C32 C31 U8P sing 433 n y C32 C33 U8P doub 434 n y C31 C30 U8P doub 435 n y C18 C17 U8P doub 436 n y C16 C17 U8P sing 437 n y C16 N15 U8P sing 438 n n C14 N15 U8P sing 439 n n C14 N29 U8P doub 440 n y C33 N34 U8P sing 441 n y C30 N29 U8P sing 442 n y C30 N34 U8P sing 443 n y C10 H1 U8P sing 444 n n C01 H2 U8P sing 445 n n C01 H3 U8P sing 446 n n C01 H4 U8P sing 447 n n C02 H5 U8P sing 448 n n C02 H6 U8P sing 449 n n C06 H7 U8P sing 450 n n C06 H8 U8P sing 451 n n C08 H9 U8P sing 452 n n C08 H10 U8P sing 453 n n C17 H11 U8P sing 454 n n C18 H12 U8P sing 455 n n C23 H13 U8P sing 456 n n C23 H14 U8P sing 457 n n C23 H15 U8P sing 458 n n C24 H16 U8P sing 459 n n C24 H17 U8P sing 460 n n C24 H18 U8P sing 461 n n C25 H19 U8P sing 462 n n C25 H20 U8P sing 463 n n C25 H21 U8P sing 464 n n C27 H22 U8P sing 465 n n C28 H23 U8P sing 466 n n C32 H24 U8P sing 467 n n C33 H25 U8P sing 468 n n C35 H26 U8P sing 469 n n C37 H27 U8P sing 470 n n C37 H28 U8P sing 471 n n N15 H29 U8P sing 472 n n N34 H30 U8P sing 473 n n # _atom_sites.entry_id 6WTP _atom_sites.fract_transf_matrix[1][1] 0.01242 _atom_sites.fract_transf_matrix[1][2] 0.007171 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014341 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 U8P A 1 1201 1 U8P MLW . C 3 GOL A 1 1202 1 GOL GOL . D 4 HOH A 1 1301 11 HOH HOH . D 4 HOH A 2 1302 8 HOH HOH . D 4 HOH A 3 1303 10 HOH HOH . D 4 HOH A 4 1304 12 HOH HOH . D 4 HOH A 5 1305 19 HOH HOH . D 4 HOH A 6 1306 18 HOH HOH . D 4 HOH A 7 1307 9 HOH HOH . D 4 HOH A 8 1308 16 HOH HOH . D 4 HOH A 9 1309 21 HOH HOH . D 4 HOH A 10 1310 15 HOH HOH . D 4 HOH A 11 1311 13 HOH HOH . D 4 HOH A 12 1312 7 HOH HOH . D 4 HOH A 13 1313 17 HOH HOH . D 4 HOH A 14 1314 4 HOH HOH . D 4 HOH A 15 1315 20 HOH HOH . D 4 HOH A 16 1316 2 HOH HOH . D 4 HOH A 17 1317 3 HOH HOH . D 4 HOH A 18 1318 14 HOH HOH . D 4 HOH A 19 1319 5 HOH HOH . D 4 HOH A 20 1320 6 HOH HOH . D 4 HOH A 21 1321 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 U8P . . . B 2 22.089 13.98 8.34 1 64.27 ? C10 U8P 1201 A 1 HETATM 2 C C11 U8P . . . B 2 21.511 15.163 8.738 1 64.19 ? C11 U8P 1201 A 1 HETATM 3 C C12 U8P . . . B 2 21.053 15.516 10.162 1 62.26 ? C12 U8P 1201 A 1 HETATM 4 C C01 U8P . . . B 2 22.353 9.587 2.152 1 78.57 ? C01 U8P 1201 A 1 HETATM 5 C C02 U8P . . . B 2 21.831 11.019 2.017 1 77.06 ? C02 U8P 1201 A 1 HETATM 6 C C06 U8P . . . B 2 22.768 13.283 4.795 1 72.67 ? C06 U8P 1201 A 1 HETATM 7 C C07 U8P . . . B 2 22.935 13.044 6.249 1 71.11 ? C07 U8P 1201 A 1 HETATM 8 C C08 U8P . . . B 2 22.101 11.843 6.151 1 72.58 ? C08 U8P 1201 A 1 HETATM 9 C C14 U8P . . . B 2 20.634 17.104 11.799 1 63.2 ? C14 U8P 1201 A 1 HETATM 10 C C16 U8P . . . B 2 20.836 19.682 11.325 1 72.63 ? C16 U8P 1201 A 1 HETATM 11 C C17 U8P . . . B 2 20.77 20.944 11.896 1 75.15 ? C17 U8P 1201 A 1 HETATM 12 C C18 U8P . . . B 2 20.961 22.084 11.125 1 78.11 ? C18 U8P 1201 A 1 HETATM 13 C C19 U8P . . . B 2 21.221 21.967 9.77 1 82.51 ? C19 U8P 1201 A 1 HETATM 14 C C20 U8P . . . B 2 21.431 23.238 8.929 1 90.14 ? C20 U8P 1201 A 1 HETATM 15 C C22 U8P . . . B 2 22.544 23.186 6.853 1 102.86 ? C22 U8P 1201 A 1 HETATM 16 C C23 U8P . . . B 2 23.428 22.066 7.399 1 103.96 ? C23 U8P 1201 A 1 HETATM 17 C C24 U8P . . . B 2 23.237 24.531 7.065 1 104.2 ? C24 U8P 1201 A 1 HETATM 18 C C25 U8P . . . B 2 22.306 22.966 5.357 1 106.72 ? C25 U8P 1201 A 1 HETATM 19 C C27 U8P . . . B 2 21.289 20.702 9.192 1 78.35 ? C27 U8P 1201 A 1 HETATM 20 C C28 U8P . . . B 2 21.097 19.559 9.966 1 74.45 ? C28 U8P 1201 A 1 HETATM 21 C C30 U8P . . . B 2 20.25 14.863 12.322 1 60.54 ? C30 U8P 1201 A 1 HETATM 22 C C31 U8P . . . B 2 20.65 14.493 11.061 1 61.23 ? C31 U8P 1201 A 1 HETATM 23 C C32 U8P . . . B 2 20.537 13.085 11.016 1 60.25 ? C32 U8P 1201 A 1 HETATM 24 C C33 U8P . . . B 2 20.073 12.657 12.251 1 59.77 ? C33 U8P 1201 A 1 HETATM 25 C C35 U8P . . . B 2 21.416 15.98 7.618 1 64.52 ? C35 U8P 1201 A 1 HETATM 26 C C37 U8P . . . B 2 24.38 12.727 6.631 1 66.54 ? C37 U8P 1201 A 1 HETATM 27 C C38 U8P . . . B 2 24.502 12.213 8.066 1 62.1 ? C38 U8P 1201 A 1 HETATM 28 N N05 U8P . . . B 2 21.878 12.111 4.7 1 74.54 ? N05 U8P 1201 A 1 HETATM 29 N N09 U8P . . . B 2 22.331 14.075 7.052 1 65.38 ? N09 U8P 1201 A 1 HETATM 30 N N13 U8P . . . B 2 21.029 16.784 10.567 1 61.15 ? N13 U8P 1201 A 1 HETATM 31 N N15 U8P . . . B 2 20.623 18.517 12.206 1 68.14 ? N15 U8P 1201 A 1 HETATM 32 N N29 U8P . . . B 2 20.253 16.182 12.662 1 61.13 ? N29 U8P 1201 A 1 HETATM 33 N N34 U8P . . . B 2 19.908 13.731 13.014 1 59.45 ? N34 U8P 1201 A 1 HETATM 34 N N36 U8P . . . B 2 21.923 15.303 6.582 1 64.35 ? N36 U8P 1201 A 1 HETATM 35 N N39 U8P . . . B 2 24.592 11.834 9.127 1 64.91 ? N39 U8P 1201 A 1 HETATM 36 O O04 U8P . . . B 2 19.773 12.381 3.154 1 80.26 ? O04 U8P 1201 A 1 HETATM 37 O O21 U8P . . . B 2 21.313 23.182 7.528 1 95.62 ? O21 U8P 1201 A 1 HETATM 38 O O26 U8P . . . B 2 21.691 24.262 9.46 1 93.52 ? O26 U8P 1201 A 1 HETATM 39 O O40 U8P . . . B 2 20.107 10.306 3.992 1 80.21 ? O40 U8P 1201 A 1 HETATM 40 S S03 U8P . . . B 2 20.859 11.458 3.49 1 79 ? S03 U8P 1201 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #