data_6WV3
#
_model_server_result.job_id            ojKne1HULK3Dk-nspSuPCA 
_model_server_result.datetime_utc      '2024-11-23 03:10:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wv3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    6WV3 
#
_exptl.entry_id    6WV3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6WV3 
_cell.length_a            153.161 
_cell.length_b            70.854 
_cell.length_c            47.356 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WV3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 183 A CYS 185 1_555 A SG CYS 191 A CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 272 A CYS 274 1_555 A SG CYS 275 A CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
covale ? covale1 A C LEU 64 A LEU 64 1_555 A N1 CRO 65 A CRO 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.409 ? 
covale ? covale2 A C3 CRO 65 A CRO 66 1_555 A N VAL 66 A VAL 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.421 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 278 n n 
C10 C9 OLC doub 279 n n 
C10 C11 OLC sing 280 n n 
C9 C8 OLC sing 281 n n 
C17 C16 OLC sing 282 z n 
C11 C12 OLC sing 283 n n 
C8 C7 OLC sing 284 n n 
C24 C22 OLC sing 285 n n 
C24 O25 OLC sing 286 n n 
C16 C15 OLC sing 287 n n 
C12 C13 OLC sing 288 n n 
C7 C6 OLC sing 289 n n 
C15 C14 OLC sing 290 n n 
C13 C14 OLC sing 291 n n 
C6 C5 OLC sing 292 n n 
C5 C4 OLC sing 293 n n 
C4 C3 OLC sing 294 n n 
C3 C2 OLC sing 295 n n 
C2 C1 OLC sing 296 n n 
C21 C22 OLC sing 297 n n 
C21 O20 OLC sing 298 n n 
C1 O19 OLC doub 299 n n 
C1 O20 OLC sing 300 n n 
C22 O23 OLC sing 301 n n 
C18 H18 OLC sing 302 n n 
C18 H18A OLC sing 303 n n 
C18 H18B OLC sing 304 n n 
C10 H10 OLC sing 305 n n 
C9 H9 OLC sing 306 n n 
C17 H17 OLC sing 307 n n 
C17 H17A OLC sing 308 n n 
C11 H11 OLC sing 309 n n 
C11 H11A OLC sing 310 n n 
C8 H8 OLC sing 311 n n 
C8 H8A OLC sing 312 n n 
C24 H24 OLC sing 313 n n 
C24 H24A OLC sing 314 n n 
C16 H16 OLC sing 315 n n 
C16 H16A OLC sing 316 n n 
C12 H12 OLC sing 317 n n 
C12 H12A OLC sing 318 n n 
C7 H7 OLC sing 319 n n 
C7 H7A OLC sing 320 n n 
C15 H15 OLC sing 321 n n 
C15 H15A OLC sing 322 n n 
C13 H13 OLC sing 323 n n 
C13 H13A OLC sing 324 n n 
C6 H6 OLC sing 325 n n 
C6 H6A OLC sing 326 n n 
C14 H14 OLC sing 327 n n 
C14 H14A OLC sing 328 n n 
C5 H5 OLC sing 329 n n 
C5 H5A OLC sing 330 n n 
C4 H4 OLC sing 331 n n 
C4 H4A OLC sing 332 n n 
C3 H3 OLC sing 333 n n 
C3 H3A OLC sing 334 n n 
C2 H2 OLC sing 335 n n 
C2 H2A OLC sing 336 n n 
C21 H21 OLC sing 337 n n 
C21 H21A OLC sing 338 n n 
C22 H22 OLC sing 339 n n 
O25 HO25 OLC sing 340 n n 
O23 HO23 OLC sing 341 n n 
#
_atom_sites.entry_id                     6WV3 
_atom_sites.fract_transf_matrix[1][1]    0.006529 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014114 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021117 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 OLC A 1 401 341 OLC OLC . 
C 2 OLC A 1 402 342 OLC OLC . 
D 2 OLC A 1 403 343 OLC OLC . 
E 3 SWF A 1 404 3001 SWF SWF . 
F 4 HOH A 1 501 118 HOH HOH . 
F 4 HOH A 2 502 82 HOH HOH . 
F 4 HOH A 3 503 31 HOH HOH . 
F 4 HOH A 4 504 83 HOH HOH . 
F 4 HOH A 5 505 86 HOH HOH . 
F 4 HOH A 6 506 140 HOH HOH . 
F 4 HOH A 7 507 39 HOH HOH . 
F 4 HOH A 8 508 2 HOH HOH . 
F 4 HOH A 9 509 113 HOH HOH . 
F 4 HOH A 10 510 99 HOH HOH . 
F 4 HOH A 11 511 111 HOH HOH . 
F 4 HOH A 12 512 76 HOH HOH . 
F 4 HOH A 13 513 45 HOH HOH . 
F 4 HOH A 14 514 42 HOH HOH . 
F 4 HOH A 15 515 19 HOH HOH . 
F 4 HOH A 16 516 13 HOH HOH . 
F 4 HOH A 17 517 40 HOH HOH . 
F 4 HOH A 18 518 144 HOH HOH . 
F 4 HOH A 19 519 77 HOH HOH . 
F 4 HOH A 20 520 22 HOH HOH . 
F 4 HOH A 21 521 54 HOH HOH . 
F 4 HOH A 22 522 24 HOH HOH . 
F 4 HOH A 23 523 34 HOH HOH . 
F 4 HOH A 24 524 104 HOH HOH . 
F 4 HOH A 25 525 33 HOH HOH . 
F 4 HOH A 26 526 70 HOH HOH . 
F 4 HOH A 27 527 3 HOH HOH . 
F 4 HOH A 28 528 62 HOH HOH . 
F 4 HOH A 29 529 6 HOH HOH . 
F 4 HOH A 30 530 93 HOH HOH . 
F 4 HOH A 31 531 21 HOH HOH . 
F 4 HOH A 32 532 48 HOH HOH . 
F 4 HOH A 33 533 88 HOH HOH . 
F 4 HOH A 34 534 1 HOH HOH . 
F 4 HOH A 35 535 121 HOH HOH . 
F 4 HOH A 36 536 35 HOH HOH . 
F 4 HOH A 37 537 12 HOH HOH . 
F 4 HOH A 38 538 116 HOH HOH . 
F 4 HOH A 39 539 100 HOH HOH . 
F 4 HOH A 40 540 44 HOH HOH . 
F 4 HOH A 41 541 122 HOH HOH . 
F 4 HOH A 42 542 117 HOH HOH . 
F 4 HOH A 43 543 112 HOH HOH . 
F 4 HOH A 44 544 27 HOH HOH . 
F 4 HOH A 45 545 8 HOH HOH . 
F 4 HOH A 46 546 74 HOH HOH . 
F 4 HOH A 47 547 5 HOH HOH . 
F 4 HOH A 48 548 63 HOH HOH . 
F 4 HOH A 49 549 125 HOH HOH . 
F 4 HOH A 50 550 64 HOH HOH . 
F 4 HOH A 51 551 71 HOH HOH . 
F 4 HOH A 52 552 46 HOH HOH . 
F 4 HOH A 53 553 29 HOH HOH . 
F 4 HOH A 54 554 4 HOH HOH . 
F 4 HOH A 55 555 10 HOH HOH . 
F 4 HOH A 56 556 49 HOH HOH . 
F 4 HOH A 57 557 115 HOH HOH . 
F 4 HOH A 58 558 30 HOH HOH . 
F 4 HOH A 59 559 79 HOH HOH . 
F 4 HOH A 60 560 59 HOH HOH . 
F 4 HOH A 61 561 105 HOH HOH . 
F 4 HOH A 62 562 9 HOH HOH . 
F 4 HOH A 63 563 32 HOH HOH . 
F 4 HOH A 64 564 56 HOH HOH . 
F 4 HOH A 65 565 20 HOH HOH . 
F 4 HOH A 66 566 57 HOH HOH . 
F 4 HOH A 67 567 41 HOH HOH . 
F 4 HOH A 68 568 14 HOH HOH . 
F 4 HOH A 69 569 65 HOH HOH . 
F 4 HOH A 70 570 80 HOH HOH . 
F 4 HOH A 71 571 47 HOH HOH . 
F 4 HOH A 72 572 103 HOH HOH . 
F 4 HOH A 73 573 97 HOH HOH . 
F 4 HOH A 74 574 61 HOH HOH . 
F 4 HOH A 75 575 51 HOH HOH . 
F 4 HOH A 76 576 141 HOH HOH . 
F 4 HOH A 77 577 84 HOH HOH . 
F 4 HOH A 78 578 38 HOH HOH . 
F 4 HOH A 79 579 92 HOH HOH . 
F 4 HOH A 80 580 55 HOH HOH . 
F 4 HOH A 81 581 11 HOH HOH . 
F 4 HOH A 82 582 78 HOH HOH . 
F 4 HOH A 83 583 87 HOH HOH . 
F 4 HOH A 84 584 50 HOH HOH . 
F 4 HOH A 85 585 72 HOH HOH . 
F 4 HOH A 86 586 7 HOH HOH . 
F 4 HOH A 87 587 109 HOH HOH . 
F 4 HOH A 88 588 43 HOH HOH . 
F 4 HOH A 89 589 119 HOH HOH . 
F 4 HOH A 90 590 25 HOH HOH . 
F 4 HOH A 91 591 106 HOH HOH . 
F 4 HOH A 92 592 139 HOH HOH . 
F 4 HOH A 93 593 101 HOH HOH . 
F 4 HOH A 94 594 130 HOH HOH . 
F 4 HOH A 95 595 66 HOH HOH . 
F 4 HOH A 96 596 69 HOH HOH . 
F 4 HOH A 97 597 68 HOH HOH . 
F 4 HOH A 98 598 53 HOH HOH . 
F 4 HOH A 99 599 134 HOH HOH . 
F 4 HOH A 100 600 26 HOH HOH . 
F 4 HOH A 101 601 28 HOH HOH . 
F 4 HOH A 102 602 127 HOH HOH . 
F 4 HOH A 103 603 107 HOH HOH . 
F 4 HOH A 104 604 15 HOH HOH . 
F 4 HOH A 105 605 52 HOH HOH . 
F 4 HOH A 106 606 108 HOH HOH . 
F 4 HOH A 107 607 36 HOH HOH . 
F 4 HOH A 108 608 131 HOH HOH . 
F 4 HOH A 109 609 94 HOH HOH . 
F 4 HOH A 110 610 135 HOH HOH . 
F 4 HOH A 111 611 23 HOH HOH . 
F 4 HOH A 112 612 85 HOH HOH . 
F 4 HOH A 113 613 98 HOH HOH . 
F 4 HOH A 114 614 58 HOH HOH . 
F 4 HOH A 115 615 17 HOH HOH . 
F 4 HOH A 116 616 18 HOH HOH . 
F 4 HOH A 117 617 132 HOH HOH . 
F 4 HOH A 118 618 102 HOH HOH . 
F 4 HOH A 119 619 37 HOH HOH . 
F 4 HOH A 120 620 60 HOH HOH . 
F 4 HOH A 121 621 120 HOH HOH . 
F 4 HOH A 122 622 138 HOH HOH . 
F 4 HOH A 123 623 124 HOH HOH . 
F 4 HOH A 124 624 90 HOH HOH . 
F 4 HOH A 125 625 16 HOH HOH . 
F 4 HOH A 126 626 143 HOH HOH . 
F 4 HOH A 127 627 96 HOH HOH . 
F 4 HOH A 128 628 91 HOH HOH . 
F 4 HOH A 129 629 133 HOH HOH . 
F 4 HOH A 130 630 136 HOH HOH . 
F 4 HOH A 131 631 73 HOH HOH . 
F 4 HOH A 132 632 126 HOH HOH . 
F 4 HOH A 133 633 75 HOH HOH . 
F 4 HOH A 134 634 110 HOH HOH . 
F 4 HOH A 135 635 129 HOH HOH . 
F 4 HOH A 136 636 67 HOH HOH . 
F 4 HOH A 137 637 114 HOH HOH . 
F 4 HOH A 138 638 128 HOH HOH . 
F 4 HOH A 139 639 89 HOH HOH . 
F 4 HOH A 140 640 123 HOH HOH . 
F 4 HOH A 141 641 137 HOH HOH . 
F 4 HOH A 142 642 95 HOH HOH . 
F 4 HOH A 143 643 142 HOH HOH . 
F 4 HOH A 144 644 81 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C7 OLC . . . B 2 -2.435 39.18 60.994 1 91.63 ? C7 OLC 401 A 1 
HETATM 2 C C6 OLC . . . B 2 -1.305 38.918 61.988 1 91.26 ? C6 OLC 401 A 1 
HETATM 3 C C5 OLC . . . B 2 -0.362 37.867 61.411 1 95.43 ? C5 OLC 401 A 1 
HETATM 4 C C4 OLC . . . B 2 -0.121 36.752 62.425 1 90.81 ? C4 OLC 401 A 1 
HETATM 5 C C3 OLC . . . B 2 0 35.427 61.675 0.5 83.32 ? C3 OLC 401 A 1 
HETATM 6 C C2 OLC . . . B 2 1.455 35.448 62.145 1 92.17 ? C2 OLC 401 A 1 
HETATM 7 C C21 OLC . . . B 2 4.268 33.922 62.888 1 98.46 ? C21 OLC 401 A 1 
HETATM 8 C C1 OLC . . . B 2 2.379 35.181 63.336 1 98.89 ? C1 OLC 401 A 1 
HETATM 9 O O19 OLC . . . B 2 2.575 36.029 64.135 1 104.46 ? O19 OLC 401 A 1 
HETATM 10 O O20 OLC . . . B 2 3.015 33.949 63.493 1 96.12 ? O20 OLC 401 A 1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#