data_6WV4
#
_model_server_result.job_id            r-mTBuMNAJWRtUcg260RLQ 
_model_server_result.datetime_utc      '2024-11-15 15:59:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wv4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":3001}' 
#
_entry.id    6WV4 
#
_exptl.entry_id    6WV4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              308.328 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-WARFARIN 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6WV4 
_cell.length_a            43.299 
_cell.length_b            49.346 
_cell.length_c            288.695 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6WV4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 191 A CYS 193 1_555 A SG CYS 272 A CYS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
covale ? covale1 A C LEU 64 A LEU 64 1_555 A N1 CRO 65 A CRO 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.476 ? 
covale ? covale2 A C3 CRO 65 A CRO 66 1_555 A N VAL 66 A VAL 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.414 ? 
#
_chem_comp.formula           'C19 H16 O4' 
_chem_comp.formula_weight    308.328 
_chem_comp.id                SWF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              S-WARFARIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 SWF sing 331 n n 
C1 H1C1 SWF sing 332 n n 
C1 H1C2 SWF sing 333 n n 
C1 H1C3 SWF sing 334 n n 
C2 O3 SWF doub 335 n n 
C2 C4 SWF sing 336 n n 
C4 C5 SWF sing 337 n n 
C4 H4C1 SWF sing 338 n n 
C4 H4C2 SWF sing 339 n n 
C5 C6 SWF sing 340 n n 
C5 C12 SWF sing 341 n n 
C5 H5 SWF sing 342 n n 
C6 C7 SWF doub 343 n y 
C6 C11 SWF sing 344 n y 
C7 C8 SWF sing 345 n y 
C7 H7 SWF sing 346 n n 
C8 C9 SWF doub 347 n y 
C8 H8 SWF sing 348 n n 
C9 C10 SWF sing 349 n y 
C9 H9 SWF sing 350 n n 
C10 C11 SWF doub 351 n y 
C10 H10 SWF sing 352 n n 
C11 H11 SWF sing 353 n n 
C12 C13 SWF doub 354 n y 
C12 C22 SWF sing 355 n y 
C13 O14 SWF sing 356 n n 
C13 C15 SWF sing 357 n y 
O14 H14 SWF sing 358 n n 
C15 C16 SWF doub 359 n y 
C15 C20 SWF sing 360 n y 
C16 C17 SWF sing 361 n y 
C16 H16 SWF sing 362 n n 
C17 C18 SWF doub 363 n y 
C17 H17 SWF sing 364 n n 
C18 C19 SWF sing 365 n y 
C18 H18 SWF sing 366 n n 
C19 C20 SWF doub 367 n y 
C19 H19 SWF sing 368 n n 
C20 O21 SWF sing 369 n y 
O21 C22 SWF sing 370 n y 
C22 O23 SWF doub 371 n n 
#
_atom_sites.entry_id                     6WV4 
_atom_sites.fract_transf_matrix[1][1]    0.023095 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020265 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003464 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SWF A 1 3001 3001 SWF SWF . 
C 3 HOH A 1 3101 4 HOH HOH . 
C 3 HOH A 2 3102 13 HOH HOH . 
C 3 HOH A 3 3103 2 HOH HOH . 
C 3 HOH A 4 3104 3 HOH HOH . 
C 3 HOH A 5 3105 5 HOH HOH . 
C 3 HOH A 6 3106 14 HOH HOH . 
C 3 HOH A 7 3107 6 HOH HOH . 
C 3 HOH A 8 3108 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 SWF . . . B 2 18.847 -21.902 -13.871 0 114.18 ? C1 SWF 3001 A 1 
HETATM 2 C C2 SWF . . . B 2 18.089 -20.61 -13.59 0 125.05 ? C2 SWF 3001 A 1 
HETATM 3 O O3 SWF . . . B 2 17.126 -20.33 -14.219 0 138.19 ? O3 SWF 3001 A 1 
HETATM 4 C C4 SWF . . . B 2 18.573 -19.682 -12.482 0 117.14 ? C4 SWF 3001 A 1 
HETATM 5 C C5 SWF . . . B 2 19.74 -18.811 -12.962 0 115.77 ? C5 SWF 3001 A 1 
HETATM 6 C C6 SWF . . . B 2 19.292 -17.872 -14.091 0 110.58 ? C6 SWF 3001 A 1 
HETATM 7 C C7 SWF . . . B 2 18.065 -17.23 -14.023 0 113.89 ? C7 SWF 3001 A 1 
HETATM 8 C C8 SWF . . . B 2 17.656 -16.383 -15.042 0 109.37 ? C8 SWF 3001 A 1 
HETATM 9 C C9 SWF . . . B 2 18.477 -16.176 -16.138 0 113.6 ? C9 SWF 3001 A 1 
HETATM 10 C C10 SWF . . . B 2 19.704 -16.817 -16.213 0 112.06 ? C10 SWF 3001 A 1 
HETATM 11 C C11 SWF . . . B 2 20.108 -17.668 -15.195 0 101.97 ? C11 SWF 3001 A 1 
HETATM 12 C C12 SWF . . . B 2 20.318 -18.014 -11.787 0 115.98 ? C12 SWF 3001 A 1 
HETATM 13 C C13 SWF . . . B 2 21.671 -18.011 -11.564 0 117.27 ? C13 SWF 3001 A 1 
HETATM 14 O O14 SWF . . . B 2 22.661 -18.055 -12.553 0 108.53 ? O14 SWF 3001 A 1 
HETATM 15 C C15 SWF . . . B 2 22.181 -17.246 -10.519 0 116.93 ? C15 SWF 3001 A 1 
HETATM 16 C C16 SWF . . . B 2 23.512 -16.792 -10.508 0 111.47 ? C16 SWF 3001 A 1 
HETATM 17 C C17 SWF . . . B 2 23.97 -16.026 -9.442 0 111.03 ? C17 SWF 3001 A 1 
HETATM 18 C C18 SWF . . . B 2 23.123 -15.712 -8.382 0 107.59 ? C18 SWF 3001 A 1 
HETATM 19 C C19 SWF . . . B 2 21.812 -16.163 -8.391 0 110.04 ? C19 SWF 3001 A 1 
HETATM 20 C C20 SWF . . . B 2 21.351 -16.936 -9.471 0 118.5 ? C20 SWF 3001 A 1 
HETATM 21 O O21 SWF . . . B 2 20.051 -17.395 -9.522 0 115.71 ? O21 SWF 3001 A 1 
HETATM 22 C C22 SWF . . . B 2 19.515 -17.5 -10.769 0 112.72 ? C22 SWF 3001 A 1 
HETATM 23 O O23 SWF . . . B 2 18.411 -17.127 -10.959 0 110.51 ? O23 SWF 3001 A 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           23 
#