data_6WW5 # _model_server_result.job_id Qz8JuYNOs-CB21D6tJKiTQ _model_server_result.datetime_utc '2024-11-17 07:33:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ww5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":501}' # _entry.id 6WW5 # _exptl.entry_id 6WW5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 410.42 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WW5 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WW5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 48 C CYS 22 1_555 C SG CYS 122 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 C SG CYS 180 C CYS 154 1_555 C SG CYS 236 C CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 D SG CYS 48 E CYS 22 1_555 D SG CYS 122 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 D SG CYS 180 E CYS 154 1_555 D SG CYS 236 E CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf5 E SG CYS 47 F CYS 23 1_555 E SG CYS 112 F CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 E SG CYS 158 F CYS 134 1_555 E SG CYS 218 F CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 F SG CYS 47 D CYS 23 1_555 F SG CYS 112 D CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf8 F SG CYS 158 D CYS 134 1_555 F SG CYS 218 D CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C17 H33 N O8 P -1' _chem_comp.formula_weight 410.42 _chem_comp.id 6PE _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 P1 6PE sing 1 n n O2 P1 6PE doub 2 n n P1 O3 6PE sing 3 n n P1 O8 6PE sing 4 n n O3 C1 6PE sing 5 n n C1 C2 6PE sing 6 n n C1 H1 6PE sing 7 n n C1 H2 6PE sing 8 n n C2 C3 6PE sing 9 n n C2 O6 6PE sing 10 n n C2 H3 6PE sing 11 n n C3 O4 6PE sing 12 n n C3 H4 6PE sing 13 n n C3 H5 6PE sing 14 n n O4 C4 6PE sing 15 n n C4 O5 6PE doub 16 n n C4 C5 6PE sing 17 n n C5 C6 6PE sing 18 n n C5 H6 6PE sing 19 n n C5 H7 6PE sing 20 n n C6 C7 6PE sing 21 n n C6 H8 6PE sing 22 n n C6 H9 6PE sing 23 n n C7 C8 6PE sing 24 n n C7 H10 6PE sing 25 n n C7 H11 6PE sing 26 n n C8 C9 6PE sing 27 n n C8 H12 6PE sing 28 n n C8 H13 6PE sing 29 n n C9 H14 6PE sing 30 n n C9 H15 6PE sing 31 n n C9 H16 6PE sing 32 n n O6 C10 6PE sing 33 n n C10 O7 6PE doub 34 n n C10 C11 6PE sing 35 n n C11 C12 6PE sing 36 n n C11 H17 6PE sing 37 n n C11 H18 6PE sing 38 n n C12 C13 6PE sing 39 n n C12 H19 6PE sing 40 n n C12 H20 6PE sing 41 n n C13 C14 6PE sing 42 n n C13 H21 6PE sing 43 n n C13 H22 6PE sing 44 n n C14 C15 6PE sing 45 n n C14 H23 6PE sing 46 n n C14 H24 6PE sing 47 n n C15 H25 6PE sing 48 n n C15 H26 6PE sing 49 n n C15 H27 6PE sing 50 n n O8 C16 6PE sing 51 n n C16 C17 6PE sing 52 n n C16 H28 6PE sing 53 n n C16 H29 6PE sing 54 n n C17 N1 6PE sing 55 n n C17 H30 6PE sing 56 n n C17 H31 6PE sing 57 n n N1 H32 6PE sing 58 n n N1 H33 6PE sing 59 n n # _atom_sites.entry_id 6WW5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 6PE A 1 501 1 6PE 6PE . H 5 HEX A 1 502 2 HEX HEX . I 6 OCT A 1 503 3 OCT OCT . J 4 6PE B 1 501 4 6PE 6PE . K 5 HEX B 1 502 5 HEX HEX . L 6 OCT B 1 503 6 OCT OCT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 6PE . . . G 4 140.411 113.115 145.329 1 36.32 ? O1 6PE 501 A 1 HETATM 2 O O2 6PE . . . G 4 138.787 112.748 143.333 1 36.32 ? O2 6PE 501 A 1 HETATM 3 P P1 6PE . . . G 4 139.14 113.484 144.608 1 36.32 ? P1 6PE 501 A 1 HETATM 4 O O3 6PE . . . G 4 139.18 115.112 144.259 1 36.32 ? O3 6PE 501 A 1 HETATM 5 C C1 6PE . . . G 4 140.469 115.451 143.801 1 36.32 ? C1 6PE 501 A 1 HETATM 6 C C2 6PE . . . G 4 140.468 115.791 142.312 1 36.32 ? C2 6PE 501 A 1 HETATM 7 C C3 6PE . . . G 4 139.138 115.378 141.604 1 36.32 ? C3 6PE 501 A 1 HETATM 8 O O4 6PE . . . G 4 139.464 114.673 140.394 1 36.32 ? O4 6PE 501 A 1 HETATM 9 C C4 6PE . . . G 4 140.035 115.414 139.425 1 36.32 ? C4 6PE 501 A 1 HETATM 10 O O5 6PE . . . G 4 141.166 115.807 139.501 1 36.32 ? O5 6PE 501 A 1 HETATM 11 C C5 6PE . . . G 4 139.139 115.709 138.222 1 36.32 ? C5 6PE 501 A 1 HETATM 12 C C6 6PE . . . G 4 140.017 115.918 136.986 1 36.32 ? C6 6PE 501 A 1 HETATM 13 C C7 6PE . . . G 4 140.726 117.265 137.041 1 36.32 ? C7 6PE 501 A 1 HETATM 14 C C8 6PE . . . G 4 141.412 117.551 135.725 1 36.32 ? C8 6PE 501 A 1 HETATM 15 C C9 6PE . . . G 4 142.743 118.188 135.991 1 36.32 ? C9 6PE 501 A 1 HETATM 16 O O6 6PE . . . G 4 140.679 117.205 142.129 1 36.32 ? O6 6PE 501 A 1 HETATM 17 C C10 6PE . . . G 4 141.972 117.608 142.052 1 36.32 ? C10 6PE 501 A 1 HETATM 18 O O7 6PE . . . G 4 142.798 117.363 142.892 1 36.32 ? O7 6PE 501 A 1 HETATM 19 C C11 6PE . . . G 4 142.316 118.412 140.798 1 36.32 ? C11 6PE 501 A 1 HETATM 20 C C12 6PE . . . G 4 143.762 118.926 140.877 1 36.32 ? C12 6PE 501 A 1 HETATM 21 C C13 6PE . . . G 4 144.32 119.153 139.459 1 36.32 ? C13 6PE 501 A 1 HETATM 22 C C14 6PE . . . G 4 145.447 120.173 139.481 1 36.32 ? C14 6PE 501 A 1 HETATM 23 C C15 6PE . . . G 4 146.469 119.853 138.42 1 36.32 ? C15 6PE 501 A 1 HETATM 24 O O8 6PE . . . G 4 137.898 113.287 145.676 1 36.32 ? O8 6PE 501 A 1 HETATM 25 C C16 6PE . . . G 4 137.749 111.909 145.841 1 36.32 ? C16 6PE 501 A 1 HETATM 26 C C17 6PE . . . G 4 137.442 111.594 147.285 1 36.32 ? C17 6PE 501 A 1 HETATM 27 N N1 6PE . . . G 4 136.319 110.664 147.347 1 36.32 ? N1 6PE 501 A 1 HETATM 28 H H1 6PE . . . G 4 141.049 114.725 143.971 1 36.32 ? H1 6PE 501 A 1 HETATM 29 H H2 6PE . . . G 4 140.813 116.188 144.318 1 36.32 ? H2 6PE 501 A 1 HETATM 30 H H3 6PE . . . G 4 141.178 115.295 141.915 1 36.32 ? H3 6PE 501 A 1 HETATM 31 H H4 6PE . . . G 4 138.648 116.178 141.417 1 36.32 ? H4 6PE 501 A 1 HETATM 32 H H5 6PE . . . G 4 138.612 114.838 142.187 1 36.32 ? H5 6PE 501 A 1 HETATM 33 H H6 6PE . . . G 4 138.623 116.497 138.37 1 36.32 ? H6 6PE 501 A 1 HETATM 34 H H7 6PE . . . G 4 138.535 114.975 138.061 1 36.32 ? H7 6PE 501 A 1 HETATM 35 H H8 6PE . . . G 4 139.475 115.869 136.193 1 36.32 ? H8 6PE 501 A 1 HETATM 36 H H9 6PE . . . G 4 140.662 115.22 136.925 1 36.32 ? H9 6PE 501 A 1 HETATM 37 H H10 6PE . . . G 4 141.372 117.276 137.741 1 36.32 ? H10 6PE 501 A 1 HETATM 38 H H11 6PE . . . G 4 140.093 117.951 137.226 1 36.32 ? H11 6PE 501 A 1 HETATM 39 H H12 6PE . . . G 4 140.882 118.142 135.197 1 36.32 ? H12 6PE 501 A 1 HETATM 40 H H13 6PE . . . G 4 141.525 116.744 135.224 1 36.32 ? H13 6PE 501 A 1 HETATM 41 H H14 6PE . . . G 4 143.219 118.358 135.174 1 36.32 ? H14 6PE 501 A 1 HETATM 42 H H15 6PE . . . G 4 142.641 119.016 136.458 1 36.32 ? H15 6PE 501 A 1 HETATM 43 H H16 6PE . . . G 4 143.288 117.622 136.53 1 36.32 ? H16 6PE 501 A 1 HETATM 44 H H17 6PE . . . G 4 142.217 117.872 140.013 1 36.32 ? H17 6PE 501 A 1 HETATM 45 H H18 6PE . . . G 4 141.723 119.158 140.726 1 36.32 ? H18 6PE 501 A 1 HETATM 46 H H19 6PE . . . G 4 143.792 119.747 141.375 1 36.32 ? H19 6PE 501 A 1 HETATM 47 H H20 6PE . . . G 4 144.312 118.295 141.347 1 36.32 ? H20 6PE 501 A 1 HETATM 48 H H21 6PE . . . G 4 144.647 118.328 139.106 1 36.32 ? H21 6PE 501 A 1 HETATM 49 H H22 6PE . . . G 4 143.627 119.456 138.874 1 36.32 ? H22 6PE 501 A 1 HETATM 50 H H23 6PE . . . G 4 145.101 121.044 139.326 1 36.32 ? H23 6PE 501 A 1 HETATM 51 H H24 6PE . . . G 4 145.869 120.184 140.336 1 36.32 ? H24 6PE 501 A 1 HETATM 52 H H25 6PE . . . G 4 146.833 118.973 138.534 1 36.32 ? H25 6PE 501 A 1 HETATM 53 H H26 6PE . . . G 4 146.081 119.903 137.548 1 36.32 ? H26 6PE 501 A 1 HETATM 54 H H27 6PE . . . G 4 147.204 120.477 138.451 1 36.32 ? H27 6PE 501 A 1 HETATM 55 H H28 6PE . . . G 4 137.048 111.592 145.262 1 36.32 ? H28 6PE 501 A 1 HETATM 56 H H29 6PE . . . G 4 138.559 111.47 145.567 1 36.32 ? H29 6PE 501 A 1 HETATM 57 H H30 6PE . . . G 4 138.223 111.196 147.683 1 36.32 ? H30 6PE 501 A 1 HETATM 58 H H31 6PE . . . G 4 137.253 112.412 147.752 1 36.32 ? H31 6PE 501 A 1 HETATM 59 H H32 6PE . . . G 4 136.14 110.538 148.207 1 36.32 ? H32 6PE 501 A 1 HETATM 60 H H33 6PE . . . G 4 135.622 111.068 146.978 1 36.32 ? H33 6PE 501 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 78 _model_server_stats.query_time_ms 1120 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 60 #