data_6WW5 # _model_server_result.job_id -Q1Mthx8UeRf8Jmifrdjkg _model_server_result.datetime_utc '2024-11-17 08:04:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ww5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":503}' # _entry.id 6WW5 # _exptl.entry_id 6WW5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 114.229 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-OCTANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WW5 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WW5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 48 C CYS 22 1_555 C SG CYS 122 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 C SG CYS 180 C CYS 154 1_555 C SG CYS 236 C CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 D SG CYS 48 E CYS 22 1_555 D SG CYS 122 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 D SG CYS 180 E CYS 154 1_555 D SG CYS 236 E CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf5 E SG CYS 47 F CYS 23 1_555 E SG CYS 112 F CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 E SG CYS 158 F CYS 134 1_555 E SG CYS 218 F CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 F SG CYS 47 D CYS 23 1_555 F SG CYS 112 D CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf8 F SG CYS 158 D CYS 134 1_555 F SG CYS 218 D CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C8 H18' _chem_comp.formula_weight 114.229 _chem_comp.id OCT _chem_comp.mon_nstd_flag . _chem_comp.name N-OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 OCT sing 313 n n C1 H11 OCT sing 314 n n C1 H12 OCT sing 315 n n C1 H13 OCT sing 316 n n C2 C3 OCT sing 317 n n C2 H21 OCT sing 318 n n C2 H22 OCT sing 319 n n C3 C4 OCT sing 320 n n C3 H31 OCT sing 321 n n C3 H32 OCT sing 322 n n C4 C5 OCT sing 323 n n C4 H41 OCT sing 324 n n C4 H42 OCT sing 325 n n C5 C6 OCT sing 326 n n C5 H51 OCT sing 327 n n C5 H52 OCT sing 328 n n C6 C7 OCT sing 329 n n C6 H61 OCT sing 330 n n C6 H62 OCT sing 331 n n C7 C8 OCT sing 332 n n C7 H71 OCT sing 333 n n C7 H72 OCT sing 334 n n C8 H81 OCT sing 335 n n C8 H82 OCT sing 336 n n C8 H83 OCT sing 337 n n # _atom_sites.entry_id 6WW5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 6PE A 1 501 1 6PE 6PE . H 5 HEX A 1 502 2 HEX HEX . I 6 OCT A 1 503 3 OCT OCT . J 4 6PE B 1 501 4 6PE 6PE . K 5 HEX B 1 502 5 HEX HEX . L 6 OCT B 1 503 6 OCT OCT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OCT . . . I 6 175.317 138.119 134.155 1 34.41 ? C1 OCT 503 A 1 HETATM 2 C C2 OCT . . . I 6 175.647 138.429 132.729 1 34.41 ? C2 OCT 503 A 1 HETATM 3 C C3 OCT . . . I 6 174.379 138.722 131.967 1 34.41 ? C3 OCT 503 A 1 HETATM 4 C C4 OCT . . . I 6 174.621 139.554 130.73 1 34.41 ? C4 OCT 503 A 1 HETATM 5 C C5 OCT . . . I 6 173.336 139.696 129.938 1 34.41 ? C5 OCT 503 A 1 HETATM 6 C C6 OCT . . . I 6 173.596 140.539 128.708 1 34.41 ? C6 OCT 503 A 1 HETATM 7 C C7 OCT . . . I 6 172.378 140.622 127.813 1 34.41 ? C7 OCT 503 A 1 HETATM 8 C C8 OCT . . . I 6 172.724 141.33 126.528 1 34.41 ? C8 OCT 503 A 1 HETATM 9 H H11 OCT . . . I 6 174.635 137.446 134.234 1 34.41 ? H11 OCT 503 A 1 HETATM 10 H H12 OCT . . . I 6 176.08 137.798 134.636 1 34.41 ? H12 OCT 503 A 1 HETATM 11 H H13 OCT . . . I 6 174.998 138.885 134.629 1 34.41 ? H13 OCT 503 A 1 HETATM 12 H H21 OCT . . . I 6 176.253 139.169 132.68 1 34.41 ? H21 OCT 503 A 1 HETATM 13 H H22 OCT . . . I 6 176.124 137.693 132.335 1 34.41 ? H22 OCT 503 A 1 HETATM 14 H H31 OCT . . . I 6 173.952 137.902 131.73 1 34.41 ? H31 OCT 503 A 1 HETATM 15 H H32 OCT . . . I 6 173.755 139.158 132.536 1 34.41 ? H32 OCT 503 A 1 HETATM 16 H H41 OCT . . . I 6 174.974 140.423 130.955 1 34.41 ? H41 OCT 503 A 1 HETATM 17 H H42 OCT . . . I 6 175.306 139.158 130.188 1 34.41 ? H42 OCT 503 A 1 HETATM 18 H H51 OCT . . . I 6 172.993 138.831 129.689 1 34.41 ? H51 OCT 503 A 1 HETATM 19 H H52 OCT . . . I 6 172.64 140.076 130.482 1 34.41 ? H52 OCT 503 A 1 HETATM 20 H H61 OCT . . . I 6 173.884 141.417 128.963 1 34.41 ? H61 OCT 503 A 1 HETATM 21 H H62 OCT . . . I 6 174.34 140.182 128.216 1 34.41 ? H62 OCT 503 A 1 HETATM 22 H H71 OCT . . . I 6 172.037 139.747 127.627 1 34.41 ? H71 OCT 503 A 1 HETATM 23 H H72 OCT . . . I 6 171.656 141.068 128.258 1 34.41 ? H72 OCT 503 A 1 HETATM 24 H H81 OCT . . . I 6 172.104 141.116 125.822 1 34.41 ? H81 OCT 503 A 1 HETATM 25 H H82 OCT . . . I 6 172.72 142.29 126.624 1 34.41 ? H82 OCT 503 A 1 HETATM 26 H H83 OCT . . . I 6 173.599 141.092 126.202 1 34.41 ? H83 OCT 503 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 74 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 26 #