data_6WW5 # _model_server_result.job_id ZKpmrqBU6fHQ4x0u56F9sg _model_server_result.datetime_utc '2024-11-17 07:35:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ww5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":503}' # _entry.id 6WW5 # _exptl.entry_id 6WW5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 114.229 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-OCTANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WW5 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WW5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 48 C CYS 22 1_555 C SG CYS 122 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 C SG CYS 180 C CYS 154 1_555 C SG CYS 236 C CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 D SG CYS 48 E CYS 22 1_555 D SG CYS 122 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 D SG CYS 180 E CYS 154 1_555 D SG CYS 236 E CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf5 E SG CYS 47 F CYS 23 1_555 E SG CYS 112 F CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 E SG CYS 158 F CYS 134 1_555 E SG CYS 218 F CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 F SG CYS 47 D CYS 23 1_555 F SG CYS 112 D CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf8 F SG CYS 158 D CYS 134 1_555 F SG CYS 218 D CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C8 H18' _chem_comp.formula_weight 114.229 _chem_comp.id OCT _chem_comp.mon_nstd_flag . _chem_comp.name N-OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 OCT sing 313 n n C1 H11 OCT sing 314 n n C1 H12 OCT sing 315 n n C1 H13 OCT sing 316 n n C2 C3 OCT sing 317 n n C2 H21 OCT sing 318 n n C2 H22 OCT sing 319 n n C3 C4 OCT sing 320 n n C3 H31 OCT sing 321 n n C3 H32 OCT sing 322 n n C4 C5 OCT sing 323 n n C4 H41 OCT sing 324 n n C4 H42 OCT sing 325 n n C5 C6 OCT sing 326 n n C5 H51 OCT sing 327 n n C5 H52 OCT sing 328 n n C6 C7 OCT sing 329 n n C6 H61 OCT sing 330 n n C6 H62 OCT sing 331 n n C7 C8 OCT sing 332 n n C7 H71 OCT sing 333 n n C7 H72 OCT sing 334 n n C8 H81 OCT sing 335 n n C8 H82 OCT sing 336 n n C8 H83 OCT sing 337 n n # _atom_sites.entry_id 6WW5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 6PE A 1 501 1 6PE 6PE . H 5 HEX A 1 502 2 HEX HEX . I 6 OCT A 1 503 3 OCT OCT . J 4 6PE B 1 501 4 6PE 6PE . K 5 HEX B 1 502 5 HEX HEX . L 6 OCT B 1 503 6 OCT OCT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OCT . . . L 6 117.051 154.246 134.195 1 34.32 ? C1 OCT 503 B 1 HETATM 2 C C2 OCT . . . L 6 116.72 153.925 132.772 1 34.32 ? C2 OCT 503 B 1 HETATM 3 C C3 OCT . . . L 6 117.988 153.643 132.007 1 34.32 ? C3 OCT 503 B 1 HETATM 4 C C4 OCT . . . L 6 117.745 152.822 130.762 1 34.32 ? C4 OCT 503 B 1 HETATM 5 C C5 OCT . . . L 6 119.032 152.675 129.973 1 34.32 ? C5 OCT 503 B 1 HETATM 6 C C6 OCT . . . L 6 118.77 151.838 128.739 1 34.32 ? C6 OCT 503 B 1 HETATM 7 C C7 OCT . . . L 6 119.992 151.746 127.85 1 34.32 ? C7 OCT 503 B 1 HETATM 8 C C8 OCT . . . L 6 119.65 151.034 126.565 1 34.32 ? C8 OCT 503 B 1 HETATM 9 H H11 OCT . . . L 6 117.736 154.915 134.268 1 34.32 ? H11 OCT 503 B 1 HETATM 10 H H12 OCT . . . L 6 116.289 154.574 134.673 1 34.32 ? H12 OCT 503 B 1 HETATM 11 H H13 OCT . . . L 6 117.366 153.481 134.676 1 34.32 ? H13 OCT 503 B 1 HETATM 12 H H21 OCT . . . L 6 116.122 153.177 132.729 1 34.32 ? H21 OCT 503 B 1 HETATM 13 H H22 OCT . . . L 6 116.232 154.652 132.376 1 34.32 ? H22 OCT 503 B 1 HETATM 14 H H31 OCT . . . L 6 118.413 154.467 131.778 1 34.32 ? H31 OCT 503 B 1 HETATM 15 H H32 OCT . . . L 6 118.614 153.202 132.57 1 34.32 ? H32 OCT 503 B 1 HETATM 16 H H41 OCT . . . L 6 117.384 151.955 130.978 1 34.32 ? H41 OCT 503 B 1 HETATM 17 H H42 OCT . . . L 6 117.066 153.229 130.219 1 34.32 ? H42 OCT 503 B 1 HETATM 18 H H51 OCT . . . L 6 119.382 153.537 129.729 1 34.32 ? H51 OCT 503 B 1 HETATM 19 H H52 OCT . . . L 6 119.724 152.286 130.518 1 34.32 ? H52 OCT 503 B 1 HETATM 20 H H61 OCT . . . L 6 118.472 150.962 128.99 1 34.32 ? H61 OCT 503 B 1 HETATM 21 H H62 OCT . . . L 6 118.032 152.204 128.245 1 34.32 ? H62 OCT 503 B 1 HETATM 22 H H71 OCT . . . L 6 120.337 152.619 127.661 1 34.32 ? H71 OCT 503 B 1 HETATM 23 H H72 OCT . . . L 6 120.711 151.3 128.301 1 34.32 ? H72 OCT 503 B 1 HETATM 24 H H81 OCT . . . L 6 120.279 151.236 125.865 1 34.32 ? H81 OCT 503 B 1 HETATM 25 H H82 OCT . . . L 6 119.641 150.074 126.668 1 34.32 ? H82 OCT 503 B 1 HETATM 26 H H83 OCT . . . L 6 118.781 151.28 126.23 1 34.32 ? H83 OCT 503 B 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 26 #