data_6WWK
#
_model_server_result.job_id            j2JZpihfG8G-eMJbzy5i4Q 
_model_server_result.datetime_utc      '2024-10-20 00:47:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6wwk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":501}' 
#
_entry.id    6WWK 
#
_exptl.entry_id    6WWK 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? 
metalc ? metalc2 G O3G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc3 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.55 ? 
metalc ? metalc4 D OE2 GLU 71 E GLU 71 1_555 N MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc5 M O1G GTP . E GTP 501 1_555 N MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? 
metalc ? metalc6 M O1B GTP . E GTP 501 1_555 N MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 221 n n 
PG O2G GTP sing 222 n n 
PG O3G GTP sing 223 n n 
PG O3B GTP sing 224 n n 
O2G HOG2 GTP sing 225 n n 
O3G HOG3 GTP sing 226 n n 
O3B PB GTP sing 227 n n 
PB O1B GTP doub 228 n n 
PB O2B GTP sing 229 n n 
PB O3A GTP sing 230 n n 
O2B HOB2 GTP sing 231 n n 
O3A PA GTP sing 232 n n 
PA O1A GTP doub 233 n n 
PA O2A GTP sing 234 n n 
PA O5' GTP sing 235 n n 
O2A HOA2 GTP sing 236 n n 
O5' C5' GTP sing 237 n n 
C5' C4' GTP sing 238 n n 
C5' H5' GTP sing 239 n n 
C5' "H5''" GTP sing 240 n n 
C4' O4' GTP sing 241 n n 
C4' C3' GTP sing 242 n n 
C4' H4' GTP sing 243 n n 
O4' C1' GTP sing 244 n n 
C3' O3' GTP sing 245 n n 
C3' C2' GTP sing 246 n n 
C3' H3' GTP sing 247 n n 
O3' HO3' GTP sing 248 n n 
C2' O2' GTP sing 249 n n 
C2' C1' GTP sing 250 n n 
C2' H2' GTP sing 251 n n 
O2' HO2' GTP sing 252 n n 
C1' N9 GTP sing 253 n n 
C1' H1' GTP sing 254 n n 
N9 C8 GTP sing 255 n y 
N9 C4 GTP sing 256 n y 
C8 N7 GTP doub 257 n y 
C8 H8 GTP sing 258 n n 
N7 C5 GTP sing 259 n y 
C5 C6 GTP sing 260 n n 
C5 C4 GTP doub 261 n y 
C6 O6 GTP doub 262 n n 
C6 N1 GTP sing 263 n n 
N1 C2 GTP sing 264 n n 
N1 HN1 GTP sing 265 n n 
C2 N2 GTP sing 266 n n 
C2 N3 GTP doub 267 n n 
N2 HN21 GTP sing 268 n n 
N2 HN22 GTP sing 269 n n 
N3 C4 GTP sing 270 n n 
#
_atom_sites.entry_id                     6WWK 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 GTP A 1 501 501 GTP GTP . 
H 5 MG A 1 502 502 MG MG . 
I 6 GDP B 1 501 501 GDP GDP . 
J 7 TA1 B 1 502 502 TA1 TA1 . 
K 8 AF3 K 1 800 800 AF3 AF3 . 
L 9 ADP K 1 801 801 ADP ADP . 
M 4 GTP E 1 501 501 GTP GTP . 
N 5 MG E 1 502 502 MG MG . 
O 6 GDP I 1 501 501 GDP GDP . 
P 7 TA1 I 1 502 502 TA1 TA1 . 
Q 9 ADP N 1 801 801 ADP ADP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . M 4 166.76 171.009 211.38 1 61.68 ? PG GTP 501 E 1 
HETATM 2 O O1G GTP . . . M 4 165.681 169.977 211.591 1 61.68 ? O1G GTP 501 E 1 
HETATM 3 O O2G GTP . . . M 4 168.017 170.595 212.093 1 61.68 ? O2G GTP 501 E 1 
HETATM 4 O O3G GTP . . . M 4 166.298 172.34 211.907 1 61.68 ? O3G GTP 501 E 1 
HETATM 5 O O3B GTP . . . M 4 167.037 171.121 209.804 1 61.68 ? O3B GTP 501 E 1 
HETATM 6 P PB GTP . . . M 4 165.825 171.567 208.856 1 61.68 ? PB GTP 501 E 1 
HETATM 7 O O1B GTP . . . M 4 164.529 171.065 209.434 1 61.68 ? O1B GTP 501 E 1 
HETATM 8 O O2B GTP . . . M 4 166.03 171.099 207.44 1 61.68 ? O2B GTP 501 E 1 
HETATM 9 O O3A GTP . . . M 4 165.832 173.164 208.918 1 61.68 ? O3A GTP 501 E 1 
HETATM 10 P PA GTP . . . M 4 164.468 173.956 208.635 1 61.68 ? PA GTP 501 E 1 
HETATM 11 O O1A GTP . . . M 4 163.565 173.851 209.834 1 61.68 ? O1A GTP 501 E 1 
HETATM 12 O O2A GTP . . . M 4 163.794 173.431 207.399 1 61.68 ? O2A GTP 501 E 1 
HETATM 13 O O5' GTP . . . M 4 164.952 175.476 208.459 1 61.68 ? O5' GTP 501 E 1 
HETATM 14 C C5' GTP . . . M 4 164.142 176.544 208.883 1 61.68 ? C5' GTP 501 E 1 
HETATM 15 C C4' GTP . . . M 4 163.347 177.068 207.702 1 61.68 ? C4' GTP 501 E 1 
HETATM 16 O O4' GTP . . . M 4 162.636 176.015 207.096 1 61.68 ? O4' GTP 501 E 1 
HETATM 17 C C3' GTP . . . M 4 162.32 178.105 208.107 1 61.68 ? C3' GTP 501 E 1 
HETATM 18 O O3' GTP . . . M 4 162.738 179.405 207.768 1 61.68 ? O3' GTP 501 E 1 
HETATM 19 C C2' GTP . . . M 4 161.067 177.739 207.345 1 61.68 ? C2' GTP 501 E 1 
HETATM 20 O O2' GTP . . . M 4 160.619 178.821 206.562 1 61.68 ? O2' GTP 501 E 1 
HETATM 21 C C1' GTP . . . M 4 161.46 176.531 206.513 1 61.68 ? C1' GTP 501 E 1 
HETATM 22 N N9 GTP . . . M 4 160.382 175.533 206.518 1 61.68 ? N9 GTP 501 E 1 
HETATM 23 C C8 GTP . . . M 4 160.165 174.55 207.439 1 61.68 ? C8 GTP 501 E 1 
HETATM 24 N N7 GTP . . . M 4 159.074 173.849 207.057 1 61.68 ? N7 GTP 501 E 1 
HETATM 25 C C5 GTP . . . M 4 158.604 174.367 205.906 1 61.68 ? C5 GTP 501 E 1 
HETATM 26 C C6 GTP . . . M 4 157.535 174.037 205.092 1 61.68 ? C6 GTP 501 E 1 
HETATM 27 O O6 GTP . . . M 4 156.8 173.102 205.392 1 61.68 ? O6 GTP 501 E 1 
HETATM 28 N N1 GTP . . . M 4 157.295 174.761 203.949 1 61.68 ? N1 GTP 501 E 1 
HETATM 29 C C2 GTP . . . M 4 158.126 175.807 203.626 1 61.68 ? C2 GTP 501 E 1 
HETATM 30 N N2 GTP . . . M 4 157.915 176.526 202.533 1 61.68 ? N2 GTP 501 E 1 
HETATM 31 N N3 GTP . . . M 4 159.185 176.125 204.438 1 61.68 ? N3 GTP 501 E 1 
HETATM 32 C C4 GTP . . . M 4 159.422 175.419 205.559 1 61.68 ? C4 GTP 501 E 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           32 
#