data_6WXO # _model_server_result.job_id xtV3gKqGdSyQFlttcq8J9g _model_server_result.datetime_utc '2024-11-12 22:42:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wxo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6WXO # _exptl.entry_id 6WXO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.269 _cell.angle_gamma 90 _cell.entry_id 6WXO _cell.length_a 48.851 _cell.length_b 62.512 _cell.length_c 48.949 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WXO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 6WXO _atom_sites.fract_transf_matrix[1][1] 0.02047 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001888 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015997 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020516 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 201 2 GOL GOL . D 3 SO4 A 1 202 1 SO4 SO4 . E 3 SO4 A 1 203 2 SO4 SO4 . F 3 SO4 B 1 201 3 SO4 SO4 . G 4 HOH A 1 301 96 HOH HOH . G 4 HOH A 2 302 46 HOH HOH . G 4 HOH A 3 303 97 HOH HOH . G 4 HOH A 4 304 124 HOH HOH . G 4 HOH A 5 305 108 HOH HOH . G 4 HOH A 6 306 99 HOH HOH . G 4 HOH A 7 307 86 HOH HOH . G 4 HOH A 8 308 16 HOH HOH . G 4 HOH A 9 309 166 HOH HOH . G 4 HOH A 10 310 65 HOH HOH . G 4 HOH A 11 311 57 HOH HOH . G 4 HOH A 12 312 7 HOH HOH . G 4 HOH A 13 313 25 HOH HOH . G 4 HOH A 14 314 149 HOH HOH . G 4 HOH A 15 315 35 HOH HOH . G 4 HOH A 16 316 14 HOH HOH . G 4 HOH A 17 317 36 HOH HOH . G 4 HOH A 18 318 195 HOH HOH . G 4 HOH A 19 319 33 HOH HOH . G 4 HOH A 20 320 128 HOH HOH . G 4 HOH A 21 321 59 HOH HOH . G 4 HOH A 22 322 29 HOH HOH . G 4 HOH A 23 323 1 HOH HOH . G 4 HOH A 24 324 78 HOH HOH . G 4 HOH A 25 325 31 HOH HOH . G 4 HOH A 26 326 81 HOH HOH . G 4 HOH A 27 327 147 HOH HOH . G 4 HOH A 28 328 22 HOH HOH . G 4 HOH A 29 329 13 HOH HOH . G 4 HOH A 30 330 27 HOH HOH . G 4 HOH A 31 331 42 HOH HOH . G 4 HOH A 32 332 63 HOH HOH . G 4 HOH A 33 333 83 HOH HOH . G 4 HOH A 34 334 90 HOH HOH . G 4 HOH A 35 335 49 HOH HOH . G 4 HOH A 36 336 19 HOH HOH . G 4 HOH A 37 337 4 HOH HOH . G 4 HOH A 38 338 8 HOH HOH . G 4 HOH A 39 339 82 HOH HOH . G 4 HOH A 40 340 41 HOH HOH . G 4 HOH A 41 341 130 HOH HOH . G 4 HOH A 42 342 141 HOH HOH . G 4 HOH A 43 343 55 HOH HOH . G 4 HOH A 44 344 136 HOH HOH . G 4 HOH A 45 345 53 HOH HOH . G 4 HOH A 46 346 40 HOH HOH . G 4 HOH A 47 347 127 HOH HOH . G 4 HOH A 48 348 84 HOH HOH . G 4 HOH A 49 349 34 HOH HOH . G 4 HOH A 50 350 93 HOH HOH . G 4 HOH A 51 351 60 HOH HOH . G 4 HOH A 52 352 100 HOH HOH . G 4 HOH A 53 353 9 HOH HOH . G 4 HOH A 54 354 114 HOH HOH . G 4 HOH A 55 355 148 HOH HOH . G 4 HOH A 56 356 6 HOH HOH . G 4 HOH A 57 357 199 HOH HOH . G 4 HOH A 58 358 137 HOH HOH . G 4 HOH A 59 359 163 HOH HOH . G 4 HOH A 60 360 133 HOH HOH . G 4 HOH A 61 361 85 HOH HOH . G 4 HOH A 62 362 157 HOH HOH . G 4 HOH A 63 363 119 HOH HOH . G 4 HOH A 64 364 126 HOH HOH . G 4 HOH A 65 365 132 HOH HOH . G 4 HOH A 66 366 134 HOH HOH . G 4 HOH A 67 367 174 HOH HOH . G 4 HOH A 68 368 175 HOH HOH . G 4 HOH A 69 369 38 HOH HOH . G 4 HOH A 70 370 190 HOH HOH . G 4 HOH A 71 371 89 HOH HOH . G 4 HOH A 72 372 145 HOH HOH . G 4 HOH A 73 373 168 HOH HOH . G 4 HOH A 74 374 198 HOH HOH . G 4 HOH A 75 375 92 HOH HOH . G 4 HOH A 76 376 153 HOH HOH . G 4 HOH A 77 377 144 HOH HOH . H 4 HOH B 1 301 43 HOH HOH . H 4 HOH B 2 302 39 HOH HOH . H 4 HOH B 3 303 122 HOH HOH . H 4 HOH B 4 304 138 HOH HOH . H 4 HOH B 5 305 177 HOH HOH . H 4 HOH B 6 306 109 HOH HOH . H 4 HOH B 7 307 151 HOH HOH . H 4 HOH B 8 308 32 HOH HOH . H 4 HOH B 9 309 103 HOH HOH . H 4 HOH B 10 310 115 HOH HOH . H 4 HOH B 11 311 23 HOH HOH . H 4 HOH B 12 312 158 HOH HOH . H 4 HOH B 13 313 107 HOH HOH . H 4 HOH B 14 314 170 HOH HOH . H 4 HOH B 15 315 61 HOH HOH . H 4 HOH B 16 316 98 HOH HOH . H 4 HOH B 17 317 21 HOH HOH . H 4 HOH B 18 318 191 HOH HOH . H 4 HOH B 19 319 113 HOH HOH . H 4 HOH B 20 320 171 HOH HOH . H 4 HOH B 21 321 45 HOH HOH . H 4 HOH B 22 322 26 HOH HOH . H 4 HOH B 23 323 72 HOH HOH . H 4 HOH B 24 324 66 HOH HOH . H 4 HOH B 25 325 73 HOH HOH . H 4 HOH B 26 326 28 HOH HOH . H 4 HOH B 27 327 180 HOH HOH . H 4 HOH B 28 328 47 HOH HOH . H 4 HOH B 29 329 2 HOH HOH . H 4 HOH B 30 330 17 HOH HOH . H 4 HOH B 31 331 52 HOH HOH . H 4 HOH B 32 332 24 HOH HOH . H 4 HOH B 33 333 131 HOH HOH . H 4 HOH B 34 334 44 HOH HOH . H 4 HOH B 35 335 5 HOH HOH . H 4 HOH B 36 336 75 HOH HOH . H 4 HOH B 37 337 68 HOH HOH . H 4 HOH B 38 338 79 HOH HOH . H 4 HOH B 39 339 204 HOH HOH . H 4 HOH B 40 340 3 HOH HOH . H 4 HOH B 41 341 11 HOH HOH . H 4 HOH B 42 342 50 HOH HOH . H 4 HOH B 43 343 77 HOH HOH . H 4 HOH B 44 344 20 HOH HOH . H 4 HOH B 45 345 205 HOH HOH . H 4 HOH B 46 346 121 HOH HOH . H 4 HOH B 47 347 51 HOH HOH . H 4 HOH B 48 348 70 HOH HOH . H 4 HOH B 49 349 64 HOH HOH . H 4 HOH B 50 350 139 HOH HOH . H 4 HOH B 51 351 67 HOH HOH . H 4 HOH B 52 352 165 HOH HOH . H 4 HOH B 53 353 76 HOH HOH . H 4 HOH B 54 354 54 HOH HOH . H 4 HOH B 55 355 15 HOH HOH . H 4 HOH B 56 356 69 HOH HOH . H 4 HOH B 57 357 80 HOH HOH . H 4 HOH B 58 358 169 HOH HOH . H 4 HOH B 59 359 37 HOH HOH . H 4 HOH B 60 360 95 HOH HOH . H 4 HOH B 61 361 30 HOH HOH . H 4 HOH B 62 362 105 HOH HOH . H 4 HOH B 63 363 12 HOH HOH . H 4 HOH B 64 364 106 HOH HOH . H 4 HOH B 65 365 58 HOH HOH . H 4 HOH B 66 366 140 HOH HOH . H 4 HOH B 67 367 56 HOH HOH . H 4 HOH B 68 368 162 HOH HOH . H 4 HOH B 69 369 135 HOH HOH . H 4 HOH B 70 370 164 HOH HOH . H 4 HOH B 71 371 112 HOH HOH . H 4 HOH B 72 372 192 HOH HOH . H 4 HOH B 73 373 102 HOH HOH . H 4 HOH B 74 374 181 HOH HOH . H 4 HOH B 75 375 71 HOH HOH . H 4 HOH B 76 376 155 HOH HOH . H 4 HOH B 77 377 125 HOH HOH . H 4 HOH B 78 378 88 HOH HOH . H 4 HOH B 79 379 172 HOH HOH . H 4 HOH B 80 380 173 HOH HOH . H 4 HOH B 81 381 18 HOH HOH . H 4 HOH B 82 382 161 HOH HOH . H 4 HOH B 83 383 94 HOH HOH . H 4 HOH B 84 384 120 HOH HOH . H 4 HOH B 85 385 159 HOH HOH . H 4 HOH B 86 386 111 HOH HOH . H 4 HOH B 87 387 178 HOH HOH . H 4 HOH B 88 388 143 HOH HOH . H 4 HOH B 89 389 152 HOH HOH . H 4 HOH B 90 390 183 HOH HOH . H 4 HOH B 91 391 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 -18.419 30.428 4.255 1 38.21 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . C 2 -18.751 31.478 3.366 1 39.97 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . C 2 -19.438 30.548 5.394 1 35.71 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . C 2 -19.379 31.826 5.961 1 37.05 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . C 2 -19.108 29.443 6.424 1 31.3 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . C 2 -17.758 29.519 6.762 1 24.68 ? O3 GOL 201 A 1 HETATM 7 H H11 GOL . . . C 2 -17.518 30.496 4.607 1 45.85 ? H11 GOL 201 A 1 HETATM 8 H H12 GOL . . . C 2 -18.479 29.55 3.848 1 45.85 ? H12 GOL 201 A 1 HETATM 9 H HO1 GOL . . . C 2 -18.881 32.169 3.842 1 47.96 ? HO1 GOL 201 A 1 HETATM 10 H H2 GOL . . . C 2 -20.336 30.407 5.057 1 42.85 ? H2 GOL 201 A 1 HETATM 11 H HO2 GOL . . . C 2 -19.932 31.85 6.608 1 44.46 ? HO2 GOL 201 A 1 HETATM 12 H H31 GOL . . . C 2 -19.352 28.587 6.037 1 37.57 ? H31 GOL 201 A 1 HETATM 13 H H32 GOL . . . C 2 -19.695 29.556 7.187 1 37.57 ? H32 GOL 201 A 1 HETATM 14 H HO3 GOL . . . C 2 -17.697 30.093 7.374 1 29.62 ? HO3 GOL 201 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #