data_6WYP # _model_server_result.job_id a5MzxXBiRhuZzjT2pEhFhQ _model_server_result.datetime_utc '2024-11-24 01:42:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6wyp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6WYP # _exptl.entry_id 6WYP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6WYP _cell.length_a 66.029 _cell.length_b 95.17 _cell.length_c 119.71 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6WYP _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 189 A ASP 228 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.83 ? metalc ? metalc2 A OD1 ASP 189 A ASP 228 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.835 ? metalc ? metalc3 A OD1 ASP 191 A ASP 230 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc4 A O ASP 191 A ASP 230 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc5 A ND1 HIS 193 A HIS 232 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc6 A O HIS 193 A HIS 232 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.982 ? metalc ? metalc7 A O PHE 202 A PHE 241 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc8 A O ASP 205 A ASP 244 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.805 ? metalc ? metalc9 A O VAL 208 A VAL 247 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc10 A OG SER 212 A SER 251 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.949 ? metalc ? metalc11 A O VAL 213 A VAL 252 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.741 ? metalc ? metalc12 A O TYR 241 A TYR 280 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc13 A OD2 ASP 284 A ASP 323 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc14 B ZN ZN . A ZN 501 1_555 E O01 UFS . A UFS 504 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.254 ? metalc ? metalc15 B ZN ZN . A ZN 501 1_555 E O01 UFS . A UFS 504 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.158 ? metalc ? metalc16 B ZN ZN . A ZN 501 1_555 E O35 UFS . A UFS 504 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.065 ? metalc ? metalc17 B ZN ZN . A ZN 501 1_555 E O35 UFS . A UFS 504 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.141 ? metalc ? metalc18 D K K . A K 503 1_555 F O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.072 ? metalc ? metalc19 D K K . A K 503 1_555 F O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.055 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6WYP _atom_sites.fract_transf_matrix[1][1] 0.015145 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010508 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008354 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 501 3 ZN ZN . C 3 K A 1 502 5 K K . D 3 K A 1 503 6 K K . E 4 UFS A 1 504 501 UFS LIG . F 5 HOH A 1 601 15 HOH HOH . F 5 HOH A 2 602 25 HOH HOH . F 5 HOH A 3 603 38 HOH HOH . F 5 HOH A 4 604 13 HOH HOH . F 5 HOH A 5 605 53 HOH HOH . F 5 HOH A 6 606 21 HOH HOH . F 5 HOH A 7 607 27 HOH HOH . F 5 HOH A 8 608 9 HOH HOH . F 5 HOH A 9 609 12 HOH HOH . F 5 HOH A 10 610 43 HOH HOH . F 5 HOH A 11 611 16 HOH HOH . F 5 HOH A 12 612 18 HOH HOH . F 5 HOH A 13 613 2 HOH HOH . F 5 HOH A 14 614 29 HOH HOH . F 5 HOH A 15 615 32 HOH HOH . F 5 HOH A 16 616 3 HOH HOH . F 5 HOH A 17 617 36 HOH HOH . F 5 HOH A 18 618 19 HOH HOH . F 5 HOH A 19 619 1 HOH HOH . F 5 HOH A 20 620 35 HOH HOH . F 5 HOH A 21 621 49 HOH HOH . F 5 HOH A 22 622 24 HOH HOH . F 5 HOH A 23 623 45 HOH HOH . F 5 HOH A 24 624 26 HOH HOH . F 5 HOH A 25 625 31 HOH HOH . F 5 HOH A 26 626 5 HOH HOH . F 5 HOH A 27 627 51 HOH HOH . F 5 HOH A 28 628 47 HOH HOH . F 5 HOH A 29 629 10 HOH HOH . F 5 HOH A 30 630 30 HOH HOH . F 5 HOH A 31 631 23 HOH HOH . F 5 HOH A 32 632 28 HOH HOH . F 5 HOH A 33 633 11 HOH HOH . F 5 HOH A 34 634 6 HOH HOH . F 5 HOH A 35 635 4 HOH HOH . F 5 HOH A 36 636 7 HOH HOH . F 5 HOH A 37 637 8 HOH HOH . F 5 HOH A 38 638 33 HOH HOH . F 5 HOH A 39 639 41 HOH HOH . F 5 HOH A 40 640 44 HOH HOH . F 5 HOH A 41 641 40 HOH HOH . F 5 HOH A 42 642 37 HOH HOH . F 5 HOH A 43 643 17 HOH HOH . F 5 HOH A 44 644 20 HOH HOH . F 5 HOH A 45 645 52 HOH HOH . F 5 HOH A 46 646 22 HOH HOH . F 5 HOH A 47 647 34 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -23.416 _atom_site.Cartn_y -10.235 _atom_site.Cartn_z -22.499 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.88 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #