data_6X1V
#
_model_server_result.job_id            krEMHYlnR5Tgkdxzx1hAwA 
_model_server_result.datetime_utc      '2024-10-10 06:21:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6x1v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    6X1V 
#
_exptl.entry_id    6X1V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.944 
_cell.angle_gamma         90 
_cell.entry_id            6X1V 
_cell.length_a            50.408 
_cell.length_b            66.296 
_cell.length_c            58.578 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6X1V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 L CYS 23 1_555 A SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf2 A SG CYS 81 L CYS 80 1_555 A SG CYS 174 L CYS 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf3 A SG CYS 138 L CYS 134 1_555 A SG CYS 197 L CYS 193 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf4 A SG CYS 138 L CYS 134 1_555 A SG CYS 197 L CYS 193 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf5 A SG CYS 215 L CYS 211 1_555 B SG CYS 132 H CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf6 B SG CYS 21 H CYS 22 1_555 B SG CYS 94 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf7 B SG CYS 133 H CYS 130 1_555 B SG CYS 218 H CYS 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf8 B SG CYS 145 H CYS 142 1_555 B SG CYS 198 H CYS 195 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf9 B SG CYS 145 H CYS 142 1_555 B SG CYS 198 H CYS 195 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.058 ? 
covale ? covale1 C C GLY 4 D GLY 4 1_555 C N UKD 5 D UKD 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 C C UKD 5 D UKD 5 1_555 C N ALA 6 D ALA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6X1V 
_atom_sites.fract_transf_matrix[1][1]    0.019838 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001716 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015084 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017135 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 EDO L 1 301 301 EDO EDO . 
E 4 EDO H 1 301 301 EDO EDO . 
F 5 HOH L 1 401 402 HOH HOH . 
F 5 HOH L 2 402 404 HOH HOH . 
F 5 HOH L 3 403 408 HOH HOH . 
F 5 HOH L 4 404 416 HOH HOH . 
F 5 HOH L 5 405 415 HOH HOH . 
F 5 HOH L 6 406 401 HOH HOH . 
F 5 HOH L 7 407 413 HOH HOH . 
F 5 HOH L 8 408 410 HOH HOH . 
F 5 HOH L 9 409 407 HOH HOH . 
F 5 HOH L 10 410 422 HOH HOH . 
F 5 HOH L 11 411 412 HOH HOH . 
F 5 HOH L 12 412 414 HOH HOH . 
F 5 HOH L 13 413 405 HOH HOH . 
F 5 HOH L 14 414 417 HOH HOH . 
F 5 HOH L 15 415 406 HOH HOH . 
F 5 HOH L 16 416 411 HOH HOH . 
F 5 HOH L 17 417 419 HOH HOH . 
F 5 HOH L 18 418 409 HOH HOH . 
F 5 HOH L 19 419 444 HOH HOH . 
F 5 HOH L 20 420 420 HOH HOH . 
F 5 HOH L 21 421 448 HOH HOH . 
F 5 HOH L 22 422 431 HOH HOH . 
F 5 HOH L 23 423 403 HOH HOH . 
F 5 HOH L 24 424 428 HOH HOH . 
F 5 HOH L 25 425 425 HOH HOH . 
F 5 HOH L 26 426 424 HOH HOH . 
F 5 HOH L 27 427 432 HOH HOH . 
F 5 HOH L 28 428 423 HOH HOH . 
F 5 HOH L 29 429 430 HOH HOH . 
F 5 HOH L 30 430 418 HOH HOH . 
F 5 HOH L 31 431 421 HOH HOH . 
F 5 HOH L 32 432 440 HOH HOH . 
F 5 HOH L 33 433 437 HOH HOH . 
F 5 HOH L 34 434 426 HOH HOH . 
F 5 HOH L 35 435 464 HOH HOH . 
F 5 HOH L 36 436 434 HOH HOH . 
F 5 HOH L 37 437 429 HOH HOH . 
F 5 HOH L 38 438 446 HOH HOH . 
F 5 HOH L 39 439 442 HOH HOH . 
F 5 HOH L 40 440 439 HOH HOH . 
F 5 HOH L 41 441 449 HOH HOH . 
F 5 HOH L 42 442 436 HOH HOH . 
F 5 HOH L 43 443 457 HOH HOH . 
F 5 HOH L 44 444 433 HOH HOH . 
F 5 HOH L 45 445 459 HOH HOH . 
F 5 HOH L 46 446 450 HOH HOH . 
F 5 HOH L 47 447 438 HOH HOH . 
F 5 HOH L 48 448 441 HOH HOH . 
F 5 HOH L 49 449 453 HOH HOH . 
F 5 HOH L 50 450 451 HOH HOH . 
F 5 HOH L 51 451 462 HOH HOH . 
F 5 HOH L 52 452 443 HOH HOH . 
F 5 HOH L 53 453 448 HOH HOH . 
F 5 HOH L 54 454 435 HOH HOH . 
F 5 HOH L 55 455 427 HOH HOH . 
F 5 HOH L 56 456 460 HOH HOH . 
F 5 HOH L 57 457 445 HOH HOH . 
F 5 HOH L 58 458 456 HOH HOH . 
F 5 HOH L 59 459 447 HOH HOH . 
F 5 HOH L 60 460 454 HOH HOH . 
F 5 HOH L 61 461 455 HOH HOH . 
F 5 HOH L 62 462 452 HOH HOH . 
F 5 HOH L 63 463 461 HOH HOH . 
F 5 HOH L 64 464 468 HOH HOH . 
F 5 HOH L 65 465 471 HOH HOH . 
F 5 HOH L 66 466 469 HOH HOH . 
F 5 HOH L 67 467 463 HOH HOH . 
F 5 HOH L 68 468 454 HOH HOH . 
F 5 HOH L 69 469 458 HOH HOH . 
F 5 HOH L 70 470 467 HOH HOH . 
F 5 HOH L 71 471 466 HOH HOH . 
F 5 HOH L 72 472 461 HOH HOH . 
F 5 HOH L 73 473 470 HOH HOH . 
F 5 HOH L 74 474 472 HOH HOH . 
F 5 HOH L 75 475 474 HOH HOH . 
F 5 HOH L 76 476 475 HOH HOH . 
F 5 HOH L 77 477 476 HOH HOH . 
F 5 HOH L 78 478 477 HOH HOH . 
F 5 HOH L 79 479 480 HOH HOH . 
F 5 HOH L 80 480 479 HOH HOH . 
G 5 HOH H 1 401 401 HOH HOH . 
G 5 HOH H 2 402 402 HOH HOH . 
G 5 HOH H 3 403 403 HOH HOH . 
G 5 HOH H 4 404 418 HOH HOH . 
G 5 HOH H 5 405 404 HOH HOH . 
G 5 HOH H 6 406 420 HOH HOH . 
G 5 HOH H 7 407 408 HOH HOH . 
G 5 HOH H 8 408 422 HOH HOH . 
G 5 HOH H 9 409 423 HOH HOH . 
G 5 HOH H 10 410 406 HOH HOH . 
G 5 HOH H 11 411 410 HOH HOH . 
G 5 HOH H 12 412 405 HOH HOH . 
G 5 HOH H 13 413 425 HOH HOH . 
G 5 HOH H 14 414 424 HOH HOH . 
G 5 HOH H 15 415 412 HOH HOH . 
G 5 HOH H 16 416 451 HOH HOH . 
G 5 HOH H 17 417 419 HOH HOH . 
G 5 HOH H 18 418 411 HOH HOH . 
G 5 HOH H 19 419 421 HOH HOH . 
G 5 HOH H 20 420 409 HOH HOH . 
G 5 HOH H 21 421 414 HOH HOH . 
G 5 HOH H 22 422 445 HOH HOH . 
G 5 HOH H 23 423 434 HOH HOH . 
G 5 HOH H 24 424 436 HOH HOH . 
G 5 HOH H 25 425 417 HOH HOH . 
G 5 HOH H 26 426 413 HOH HOH . 
G 5 HOH H 27 427 449 HOH HOH . 
G 5 HOH H 28 428 428 HOH HOH . 
G 5 HOH H 29 429 407 HOH HOH . 
G 5 HOH H 30 430 437 HOH HOH . 
G 5 HOH H 31 431 431 HOH HOH . 
G 5 HOH H 32 432 430 HOH HOH . 
G 5 HOH H 33 433 416 HOH HOH . 
G 5 HOH H 34 434 415 HOH HOH . 
G 5 HOH H 35 435 439 HOH HOH . 
G 5 HOH H 36 436 429 HOH HOH . 
G 5 HOH H 37 437 432 HOH HOH . 
G 5 HOH H 38 438 435 HOH HOH . 
G 5 HOH H 39 439 442 HOH HOH . 
G 5 HOH H 40 440 438 HOH HOH . 
G 5 HOH H 41 441 441 HOH HOH . 
G 5 HOH H 42 442 465 HOH HOH . 
G 5 HOH H 43 443 440 HOH HOH . 
G 5 HOH H 44 444 427 HOH HOH . 
G 5 HOH H 45 445 446 HOH HOH . 
G 5 HOH H 46 446 443 HOH HOH . 
G 5 HOH H 47 447 444 HOH HOH . 
G 5 HOH H 48 448 447 HOH HOH . 
G 5 HOH H 49 449 453 HOH HOH . 
G 5 HOH H 50 450 455 HOH HOH . 
G 5 HOH H 51 451 457 HOH HOH . 
G 5 HOH H 52 452 450 HOH HOH . 
G 5 HOH H 53 453 426 HOH HOH . 
G 5 HOH H 54 454 456 HOH HOH . 
G 5 HOH H 55 455 433 HOH HOH . 
G 5 HOH H 56 456 460 HOH HOH . 
G 5 HOH H 57 457 459 HOH HOH . 
G 5 HOH H 58 458 452 HOH HOH . 
G 5 HOH H 59 459 458 HOH HOH . 
G 5 HOH H 60 460 462 HOH HOH . 
G 5 HOH H 61 461 464 HOH HOH . 
G 5 HOH H 62 462 463 HOH HOH . 
G 5 HOH H 63 463 473 HOH HOH . 
G 5 HOH H 64 464 465 HOH HOH . 
G 5 HOH H 65 465 468 HOH HOH . 
G 5 HOH H 66 466 466 HOH HOH . 
G 5 HOH H 67 467 467 HOH HOH . 
G 5 HOH H 68 468 470 HOH HOH . 
G 5 HOH H 69 469 469 HOH HOH . 
G 5 HOH H 70 470 478 HOH HOH . 
H 5 HOH D 1 101 101 HOH HOH . 
H 5 HOH D 2 102 102 HOH HOH . 
H 5 HOH D 3 103 103 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 4 3.832 -1.807 -33.031 1 31.16 ? C1 EDO 301 H 1 
HETATM 2 O O1 EDO . . . E 4 2.418 -1.589 -33.026 1 38.12 ? O1 EDO 301 H 1 
HETATM 3 C C2 EDO . . . E 4 4.394 -1.535 -31.642 1 36.51 ? C2 EDO 301 H 1 
HETATM 4 O O2 EDO . . . E 4 5.017 -2.712 -31.115 1 33.63 ? O2 EDO 301 H 1 
HETATM 5 H H11 EDO . . . E 4 4.307 -1.147 -33.759 1 37.39 ? H11 EDO 301 H 1 
HETATM 6 H H12 EDO . . . E 4 4.047 -2.838 -33.322 1 37.39 ? H12 EDO 301 H 1 
HETATM 7 H HO1 EDO . . . E 4 2.061 -1.77 -33.907 1 45.74 ? HO1 EDO 301 H 1 
HETATM 8 H H21 EDO . . . E 4 3.589 -1.216 -30.976 1 43.82 ? H21 EDO 301 H 1 
HETATM 9 H H22 EDO . . . E 4 5.126 -0.725 -31.695 1 43.82 ? H22 EDO 301 H 1 
HETATM 10 H HO2 EDO . . . E 4 5.358 -2.528 -30.229 1 40.36 ? HO2 EDO 301 H 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#