data_6X25 # _model_server_result.job_id ypkXKnId2QEyOy7Tz0VGHg _model_server_result.datetime_utc '2024-11-18 01:47:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6x25 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 6X25 # _exptl.entry_id 6X25 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6X25 _cell.length_a 51.64 _cell.length_b 51.64 _cell.length_c 143.33 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6X25 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 79 A GLU 79 1_555 B GD GD . A GD 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc2 A OD1 ASP 153 A ASP 153 1_555 B GD GD . A GD 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc3 A OD2 ASP 153 A ASP 153 1_555 C GD GD . A GD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc4 A O ILE 155 A ILE 155 1_555 B GD GD . A GD 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc5 A OD1 ASP 156 A ASP 156 1_555 C GD GD . A GD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.049 ? metalc ? metalc6 A OD1 ASP 317 A ASP 317 1_555 C GD GD . A GD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc7 B GD GD . A GD 501 1_555 E O2 SO4 . A SO4 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc8 C GD GD . A GD 502 1_555 E O1 SO4 . A SO4 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.063 ? metalc ? metalc9 C GD GD . A GD 502 1_555 E O2 SO4 . A SO4 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 6X25 _atom_sites.fract_transf_matrix[1][1] 0.019365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019365 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006977 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GD A 1 501 2 GD GD . C 2 GD A 1 502 1 GD GD . D 3 SO4 A 1 503 1 SO4 SO4 . E 3 SO4 A 1 504 2 SO4 SO4 . F 4 HOH A 1 601 8 HOH HOH . F 4 HOH A 2 602 11 HOH HOH . F 4 HOH A 3 603 1 HOH HOH . F 4 HOH A 4 604 12 HOH HOH . F 4 HOH A 5 605 9 HOH HOH . F 4 HOH A 6 606 16 HOH HOH . F 4 HOH A 7 607 4 HOH HOH . F 4 HOH A 8 608 6 HOH HOH . F 4 HOH A 9 609 13 HOH HOH . F 4 HOH A 10 610 10 HOH HOH . F 4 HOH A 11 611 7 HOH HOH . F 4 HOH A 12 612 15 HOH HOH . F 4 HOH A 13 613 3 HOH HOH . F 4 HOH A 14 614 14 HOH HOH . F 4 HOH A 15 615 5 HOH HOH . F 4 HOH A 16 616 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 -10.331 20.569 43.287 1 65.51 ? S SO4 503 A 1 HETATM 2 O O1 SO4 . . . D 3 -9.108 21.328 43.279 1 65.18 ? O1 SO4 503 A 1 HETATM 3 O O2 SO4 . . . D 3 -10.935 20.618 41.983 1 65.11 ? O2 SO4 503 A 1 HETATM 4 O O3 SO4 . . . D 3 -10.044 19.201 43.632 1 63.94 ? O3 SO4 503 A 1 HETATM 5 O O4 SO4 . . . D 3 -11.236 21.127 44.256 1 63.31 ? O4 SO4 503 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 424 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #