data_6X2D
#
_model_server_result.job_id            RsDXjMsE2kohLhM818gg0w 
_model_server_result.datetime_utc      '2024-10-19 15:36:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6x2d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    6X2D 
#
_exptl.entry_id    6X2D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.16 
_cell.angle_gamma         90 
_cell.entry_id            6X2D 
_cell.length_a            40.614 
_cell.length_b            58.812 
_cell.length_c            47.046 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6X2D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASP 73 A ASP 348 1_555 A N MSE 74 A MSE 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale2 A C MSE 74 A MSE 349 1_555 A N THR 75 A THR 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale3 A C GLU 110 A GLU 385 1_555 A N MSE 111 A MSE 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 A C MSE 111 A MSE 386 1_555 A N SER 112 A SER 387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale5 B C ASP 73 B ASP 348 1_555 B N MSE 74 B MSE 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale6 B C MSE 74 B MSE 349 1_555 B N THR 75 B THR 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale7 B C GLU 110 B GLU 385 1_555 B N MSE 111 B MSE 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale8 B C MSE 111 B MSE 386 1_555 B N SER 112 B SER 387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     6X2D 
_atom_sites.fract_transf_matrix[1][1]    0.024622 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008074 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017003 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02237 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 IOD A 1 401 1 IOD IOD . 
D 2 IOD A 1 402 2 IOD IOD . 
E 2 IOD A 1 403 3 IOD IOD . 
F 2 IOD A 1 404 7 IOD IOD . 
G 2 IOD B 1 401 4 IOD IOD . 
H 2 IOD B 1 402 5 IOD IOD . 
I 2 IOD B 1 403 6 IOD IOD . 
J 3 HOH A 1 501 21 HOH HOH . 
J 3 HOH A 2 502 25 HOH HOH . 
J 3 HOH A 3 503 42 HOH HOH . 
J 3 HOH A 4 504 60 HOH HOH . 
J 3 HOH A 5 505 19 HOH HOH . 
J 3 HOH A 6 506 48 HOH HOH . 
J 3 HOH A 7 507 77 HOH HOH . 
J 3 HOH A 8 508 41 HOH HOH . 
J 3 HOH A 9 509 45 HOH HOH . 
J 3 HOH A 10 510 57 HOH HOH . 
J 3 HOH A 11 511 26 HOH HOH . 
J 3 HOH A 12 512 9 HOH HOH . 
J 3 HOH A 13 513 23 HOH HOH . 
J 3 HOH A 14 514 49 HOH HOH . 
J 3 HOH A 15 515 59 HOH HOH . 
J 3 HOH A 16 516 16 HOH HOH . 
J 3 HOH A 17 517 78 HOH HOH . 
J 3 HOH A 18 518 58 HOH HOH . 
J 3 HOH A 19 519 8 HOH HOH . 
J 3 HOH A 20 520 13 HOH HOH . 
J 3 HOH A 21 521 72 HOH HOH . 
J 3 HOH A 22 522 46 HOH HOH . 
J 3 HOH A 23 523 14 HOH HOH . 
J 3 HOH A 24 524 53 HOH HOH . 
J 3 HOH A 25 525 51 HOH HOH . 
J 3 HOH A 26 526 79 HOH HOH . 
J 3 HOH A 27 527 28 HOH HOH . 
J 3 HOH A 28 528 20 HOH HOH . 
J 3 HOH A 29 529 43 HOH HOH . 
J 3 HOH A 30 530 56 HOH HOH . 
J 3 HOH A 31 531 22 HOH HOH . 
J 3 HOH A 32 532 55 HOH HOH . 
J 3 HOH A 33 533 40 HOH HOH . 
J 3 HOH A 34 534 50 HOH HOH . 
J 3 HOH A 35 535 27 HOH HOH . 
J 3 HOH A 36 536 39 HOH HOH . 
J 3 HOH A 37 537 12 HOH HOH . 
K 3 HOH B 1 501 32 HOH HOH . 
K 3 HOH B 2 502 18 HOH HOH . 
K 3 HOH B 3 503 52 HOH HOH . 
K 3 HOH B 4 504 54 HOH HOH . 
K 3 HOH B 5 505 80 HOH HOH . 
K 3 HOH B 6 506 35 HOH HOH . 
K 3 HOH B 7 507 31 HOH HOH . 
K 3 HOH B 8 508 70 HOH HOH . 
K 3 HOH B 9 509 73 HOH HOH . 
K 3 HOH B 10 510 38 HOH HOH . 
K 3 HOH B 11 511 30 HOH HOH . 
K 3 HOH B 12 512 10 HOH HOH . 
K 3 HOH B 13 513 11 HOH HOH . 
K 3 HOH B 14 514 63 HOH HOH . 
K 3 HOH B 15 515 47 HOH HOH . 
K 3 HOH B 16 516 62 HOH HOH . 
K 3 HOH B 17 517 15 HOH HOH . 
K 3 HOH B 18 518 33 HOH HOH . 
K 3 HOH B 19 519 67 HOH HOH . 
K 3 HOH B 20 520 36 HOH HOH . 
K 3 HOH B 21 521 37 HOH HOH . 
K 3 HOH B 22 522 17 HOH HOH . 
K 3 HOH B 23 523 65 HOH HOH . 
K 3 HOH B 24 524 24 HOH HOH . 
K 3 HOH B 25 525 69 HOH HOH . 
K 3 HOH B 26 526 64 HOH HOH . 
K 3 HOH B 27 527 61 HOH HOH . 
K 3 HOH B 28 528 71 HOH HOH . 
K 3 HOH B 29 529 75 HOH HOH . 
K 3 HOH B 30 530 66 HOH HOH . 
K 3 HOH B 31 531 29 HOH HOH . 
K 3 HOH B 32 532 68 HOH HOH . 
K 3 HOH B 33 533 76 HOH HOH . 
K 3 HOH B 34 534 34 HOH HOH . 
K 3 HOH B 35 535 44 HOH HOH . 
K 3 HOH B 36 536 74 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -2.365 
_atom_site.Cartn_y               -7.725 
_atom_site.Cartn_z               -12.034 
_atom_site.occupancy             0.7 
_atom_site.B_iso_or_equiv        83.83 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#