data_6X2H # _model_server_result.job_id 3QdAVLetrjpJfnMT3jKSxw _model_server_result.datetime_utc '2025-07-31 01:03:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6x2h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6X2H # _exptl.entry_id 6X2H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 397.317 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description cis-3-({(1S)-7-[dihydroxy(trifluoromethyl)-lambda~4~-sulfanyl]-2,2-difluoro-1-hydroxy-2,3-dihydro-1H-inden-4-yl}oxy)cyclobutane-1-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.73 _cell.angle_gamma 90 _cell.entry_id 6X2H _cell.length_a 73.045 _cell.length_b 84.443 _cell.length_c 41.473 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6X2H _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_544 -x+1/2,y-1/2,-z-1 -1 0 0 0 1 0 0 0 -1 48.461001 -42.2215 -39.717527 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H12 F5 N O4 S' _chem_comp.formula_weight 397.317 _chem_comp.id ULD _chem_comp.mon_nstd_flag . _chem_comp.name cis-3-({(1S)-7-[dihydroxy(trifluoromethyl)-lambda~4~-sulfanyl]-2,2-difluoro-1-hydroxy-2,3-dihydro-1H-inden-4-yl}oxy)cyclobutane-1-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C15 ULD trip 358 n n C15 C13 ULD sing 359 n n C13 C12 ULD sing 360 n n C13 C14 ULD sing 361 n n C12 C11 ULD sing 362 n n C14 C11 ULD sing 363 n n C11 O4 ULD sing 364 n n O4 C2 ULD sing 365 n n C2 C3 ULD doub 366 n y C2 C8 ULD sing 367 n y C3 C4 ULD sing 368 n y C4 C1 ULD doub 369 n y C8 C9 ULD sing 370 n n C8 C7 ULD doub 371 n y C9 C5 ULD sing 372 n n C5 F2 ULD sing 373 n n C5 F1 ULD sing 374 n n C5 C6 ULD sing 375 n n C7 C6 ULD sing 376 n n C7 C1 ULD sing 377 n y C6 O1 ULD sing 378 n n C1 S1 ULD sing 379 n n S1 O2 ULD doub 380 n n S1 O3 ULD doub 381 n n S1 C10 ULD sing 382 n n C10 F3 ULD sing 383 n n C10 F4 ULD sing 384 n n C10 F5 ULD sing 385 n n C13 H1 ULD sing 386 n n C12 H2 ULD sing 387 n n C12 H3 ULD sing 388 n n C14 H4 ULD sing 389 n n C14 H5 ULD sing 390 n n C11 H6 ULD sing 391 n n C3 H7 ULD sing 392 n n C4 H8 ULD sing 393 n n C9 H9 ULD sing 394 n n C9 H10 ULD sing 395 n n C6 H11 ULD sing 396 n n O1 H12 ULD sing 397 n n # _atom_sites.entry_id 6X2H _atom_sites.fract_transf_matrix[1][1] 0.01369 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004115 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011842 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ULD A 1 401 1 ULD UNK . D 4 HOH A 1 501 37 HOH HOH . D 4 HOH A 2 502 42 HOH HOH . D 4 HOH A 3 503 17 HOH HOH . D 4 HOH A 4 504 7 HOH HOH . D 4 HOH A 5 505 12 HOH HOH . D 4 HOH A 6 506 26 HOH HOH . D 4 HOH A 7 507 20 HOH HOH . D 4 HOH A 8 508 28 HOH HOH . D 4 HOH A 9 509 5 HOH HOH . D 4 HOH A 10 510 38 HOH HOH . D 4 HOH A 11 511 30 HOH HOH . D 4 HOH A 12 512 24 HOH HOH . D 4 HOH A 13 513 4 HOH HOH . D 4 HOH A 14 514 3 HOH HOH . D 4 HOH A 15 515 23 HOH HOH . D 4 HOH A 16 516 41 HOH HOH . D 4 HOH A 17 517 36 HOH HOH . D 4 HOH A 18 518 33 HOH HOH . D 4 HOH A 19 519 8 HOH HOH . E 4 HOH B 1 501 31 HOH HOH . E 4 HOH B 2 502 19 HOH HOH . E 4 HOH B 3 503 16 HOH HOH . E 4 HOH B 4 504 21 HOH HOH . E 4 HOH B 5 505 6 HOH HOH . E 4 HOH B 6 506 27 HOH HOH . E 4 HOH B 7 507 29 HOH HOH . E 4 HOH B 8 508 32 HOH HOH . E 4 HOH B 9 509 18 HOH HOH . E 4 HOH B 10 510 2 HOH HOH . E 4 HOH B 11 511 13 HOH HOH . E 4 HOH B 12 512 10 HOH HOH . E 4 HOH B 13 513 35 HOH HOH . E 4 HOH B 14 514 15 HOH HOH . E 4 HOH B 15 515 22 HOH HOH . E 4 HOH B 16 516 11 HOH HOH . E 4 HOH B 17 517 40 HOH HOH . E 4 HOH B 18 518 14 HOH HOH . E 4 HOH B 19 519 9 HOH HOH . E 4 HOH B 20 520 25 HOH HOH . E 4 HOH B 21 521 1 HOH HOH . E 4 HOH B 22 522 39 HOH HOH . E 4 HOH B 23 523 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 ULD . . . C 3 17.882 -3.164 -11.733 1 25.12 ? N1 ULD 401 A 1 HETATM 2 C C15 ULD . . . C 3 18.781 -2.542 -11.464 1 21.97 ? C15 ULD 401 A 1 HETATM 3 C C13 ULD . . . C 3 19.85 -1.673 -11.065 1 22.07 ? C13 ULD 401 A 1 HETATM 4 C C12 ULD . . . C 3 20.091 -0.257 -11.406 1 18.47 ? C12 ULD 401 A 1 HETATM 5 C C14 ULD . . . C 3 21.086 -2.021 -10.298 1 20.45 ? C14 ULD 401 A 1 HETATM 6 C C11 ULD . . . C 3 21.214 -0.494 -10.377 1 21.22 ? C11 ULD 401 A 1 HETATM 7 O O4 ULD . . . C 3 22.411 -0.213 -11.019 1 19.47 ? O4 ULD 401 A 1 HETATM 8 C C2 ULD . . . C 3 23.569 -0.222 -10.288 1 21.22 ? C2 ULD 401 A 1 HETATM 9 C C3 ULD . . . C 3 23.63 -0.54 -8.937 1 21.51 ? C3 ULD 401 A 1 HETATM 10 C C4 ULD . . . C 3 24.857 -0.496 -8.236 1 23.53 ? C4 ULD 401 A 1 HETATM 11 C C8 ULD . . . C 3 24.682 0.155 -10.934 1 23.78 ? C8 ULD 401 A 1 HETATM 12 C C9 ULD . . . C 3 24.768 0.508 -12.403 1 24.67 ? C9 ULD 401 A 1 HETATM 13 C C5 ULD . . . C 3 26.283 0.402 -12.628 1 28.2 ? C5 ULD 401 A 1 HETATM 14 F F2 ULD . . . C 3 26.731 1.226 -13.598 1 24.92 ? F2 ULD 401 A 1 HETATM 15 F F1 ULD . . . C 3 26.663 -0.817 -13.028 1 28.91 ? F1 ULD 401 A 1 HETATM 16 C C7 ULD . . . C 3 25.889 0.202 -10.256 1 26.58 ? C7 ULD 401 A 1 HETATM 17 C C6 ULD . . . C 3 26.902 0.627 -11.236 1 25.93 ? C6 ULD 401 A 1 HETATM 18 O O1 ULD . . . C 3 27.057 2.008 -11.095 1 29.75 ? O1 ULD 401 A 1 HETATM 19 C C1 ULD . . . C 3 26.02 -0.099 -8.874 1 28.07 ? C1 ULD 401 A 1 HETATM 20 S S1 ULD . . . C 3 27.442 -0.016 -7.998 1 31.55 ? S1 ULD 401 A 1 HETATM 21 O O2 ULD . . . C 3 27.242 0.268 -6.605 1 32.56 ? O2 ULD 401 A 1 HETATM 22 O O3 ULD . . . C 3 28.226 0.996 -8.672 1 29.8 ? O3 ULD 401 A 1 HETATM 23 C C10 ULD . . . C 3 28.143 -1.539 -8.054 1 33.27 ? C10 ULD 401 A 1 HETATM 24 F F3 ULD . . . C 3 28.231 -1.834 -9.324 1 32 ? F3 ULD 401 A 1 HETATM 25 F F4 ULD . . . C 3 29.364 -1.566 -7.535 1 41.44 ? F4 ULD 401 A 1 HETATM 26 F F5 ULD . . . C 3 27.375 -2.426 -7.433 1 31.13 ? F5 ULD 401 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 1269 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 26 #