data_6X2R
#
_model_server_result.job_id            LvcCa1dnF3o5Exdl-Bzm8w 
_model_server_result.datetime_utc      '2024-11-26 13:01:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6x2r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1101}' 
#
_entry.id    6X2R 
#
_exptl.entry_id    6X2R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6X2R 
_cell.length_a            106.602 
_cell.length_b            106.602 
_cell.length_c            303.674 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6X2R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 G N N 
? 7 H N N 
? 7 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 24 A THR 24 1_555 F MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? 
metalc ? metalc2 A OG1 THR 42 A THR 42 1_555 F MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? 
metalc ? metalc3 E O2G GNP . A GNP 301 1_555 F MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc4 E O1B GNP . A GNP 301 1_555 F MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 180 n n 
C1 C2 GOL sing 181 n n 
C1 H11 GOL sing 182 n n 
C1 H12 GOL sing 183 n n 
O1 HO1 GOL sing 184 n n 
C2 O2 GOL sing 185 n n 
C2 C3 GOL sing 186 n n 
C2 H2 GOL sing 187 n n 
O2 HO2 GOL sing 188 n n 
C3 O3 GOL sing 189 n n 
C3 H31 GOL sing 190 n n 
C3 H32 GOL sing 191 n n 
O3 HO3 GOL sing 192 n n 
#
_atom_sites.entry_id                     6X2R 
_atom_sites.fract_transf_matrix[1][1]    0.009381 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009381 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003293 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 GNP A 1 301 301 GNP GNP . 
F 6 MG A 1 302 302 MG MG . 
G 7 GOL A 1 303 303 GOL GOL . 
H 7 GOL C 1 1101 1101 GOL GOL . 
I 7 GOL C 1 1102 1102 GOL GOL . 
J 8 HOH A 1 401 164 HOH HOH . 
J 8 HOH A 2 402 129 HOH HOH . 
J 8 HOH A 3 403 26 HOH HOH . 
J 8 HOH A 4 404 46 HOH HOH . 
J 8 HOH A 5 405 161 HOH HOH . 
J 8 HOH A 6 406 116 HOH HOH . 
J 8 HOH A 7 407 119 HOH HOH . 
J 8 HOH A 8 408 23 HOH HOH . 
J 8 HOH A 9 409 13 HOH HOH . 
J 8 HOH A 10 410 37 HOH HOH . 
J 8 HOH A 11 411 77 HOH HOH . 
J 8 HOH A 12 412 54 HOH HOH . 
J 8 HOH A 13 413 126 HOH HOH . 
J 8 HOH A 14 414 162 HOH HOH . 
J 8 HOH A 15 415 5 HOH HOH . 
J 8 HOH A 16 416 150 HOH HOH . 
J 8 HOH A 17 417 30 HOH HOH . 
J 8 HOH A 18 418 43 HOH HOH . 
J 8 HOH A 19 419 94 HOH HOH . 
J 8 HOH A 20 420 143 HOH HOH . 
J 8 HOH A 21 421 41 HOH HOH . 
J 8 HOH A 22 422 71 HOH HOH . 
J 8 HOH A 23 423 20 HOH HOH . 
J 8 HOH A 24 424 42 HOH HOH . 
J 8 HOH A 25 425 78 HOH HOH . 
J 8 HOH A 26 426 115 HOH HOH . 
J 8 HOH A 27 427 123 HOH HOH . 
J 8 HOH A 28 428 160 HOH HOH . 
K 8 HOH B 1 301 127 HOH HOH . 
K 8 HOH B 2 302 151 HOH HOH . 
K 8 HOH B 3 303 125 HOH HOH . 
L 8 HOH C 1 1201 84 HOH HOH . 
L 8 HOH C 2 1202 9 HOH HOH . 
L 8 HOH C 3 1203 159 HOH HOH . 
L 8 HOH C 4 1204 157 HOH HOH . 
L 8 HOH C 5 1205 100 HOH HOH . 
L 8 HOH C 6 1206 138 HOH HOH . 
L 8 HOH C 7 1207 95 HOH HOH . 
L 8 HOH C 8 1208 163 HOH HOH . 
L 8 HOH C 9 1209 118 HOH HOH . 
L 8 HOH C 10 1210 99 HOH HOH . 
L 8 HOH C 11 1211 103 HOH HOH . 
L 8 HOH C 12 1212 142 HOH HOH . 
L 8 HOH C 13 1213 120 HOH HOH . 
L 8 HOH C 14 1214 59 HOH HOH . 
L 8 HOH C 15 1215 56 HOH HOH . 
L 8 HOH C 16 1216 102 HOH HOH . 
L 8 HOH C 17 1217 131 HOH HOH . 
L 8 HOH C 18 1218 35 HOH HOH . 
L 8 HOH C 19 1219 72 HOH HOH . 
L 8 HOH C 20 1220 24 HOH HOH . 
L 8 HOH C 21 1221 124 HOH HOH . 
L 8 HOH C 22 1222 53 HOH HOH . 
L 8 HOH C 23 1223 101 HOH HOH . 
L 8 HOH C 24 1224 111 HOH HOH . 
L 8 HOH C 25 1225 17 HOH HOH . 
L 8 HOH C 26 1226 44 HOH HOH . 
L 8 HOH C 27 1227 70 HOH HOH . 
L 8 HOH C 28 1228 86 HOH HOH . 
L 8 HOH C 29 1229 14 HOH HOH . 
L 8 HOH C 30 1230 63 HOH HOH . 
L 8 HOH C 31 1231 98 HOH HOH . 
L 8 HOH C 32 1232 48 HOH HOH . 
L 8 HOH C 33 1233 50 HOH HOH . 
L 8 HOH C 34 1234 25 HOH HOH . 
L 8 HOH C 35 1235 11 HOH HOH . 
L 8 HOH C 36 1236 170 HOH HOH . 
L 8 HOH C 37 1237 107 HOH HOH . 
L 8 HOH C 38 1238 47 HOH HOH . 
L 8 HOH C 39 1239 6 HOH HOH . 
L 8 HOH C 40 1240 88 HOH HOH . 
L 8 HOH C 41 1241 133 HOH HOH . 
L 8 HOH C 42 1242 40 HOH HOH . 
L 8 HOH C 43 1243 52 HOH HOH . 
L 8 HOH C 44 1244 158 HOH HOH . 
L 8 HOH C 45 1245 153 HOH HOH . 
L 8 HOH C 46 1246 22 HOH HOH . 
L 8 HOH C 47 1247 27 HOH HOH . 
L 8 HOH C 48 1248 10 HOH HOH . 
L 8 HOH C 49 1249 45 HOH HOH . 
L 8 HOH C 50 1250 2 HOH HOH . 
L 8 HOH C 51 1251 1 HOH HOH . 
L 8 HOH C 52 1252 73 HOH HOH . 
L 8 HOH C 53 1253 18 HOH HOH . 
L 8 HOH C 54 1254 16 HOH HOH . 
L 8 HOH C 55 1255 19 HOH HOH . 
L 8 HOH C 56 1256 36 HOH HOH . 
L 8 HOH C 57 1257 31 HOH HOH . 
L 8 HOH C 58 1258 4 HOH HOH . 
L 8 HOH C 59 1259 134 HOH HOH . 
L 8 HOH C 60 1260 130 HOH HOH . 
L 8 HOH C 61 1261 135 HOH HOH . 
L 8 HOH C 62 1262 15 HOH HOH . 
L 8 HOH C 63 1263 169 HOH HOH . 
L 8 HOH C 64 1264 7 HOH HOH . 
L 8 HOH C 65 1265 92 HOH HOH . 
L 8 HOH C 66 1266 12 HOH HOH . 
L 8 HOH C 67 1267 109 HOH HOH . 
L 8 HOH C 68 1268 39 HOH HOH . 
L 8 HOH C 69 1269 58 HOH HOH . 
L 8 HOH C 70 1270 28 HOH HOH . 
L 8 HOH C 71 1271 29 HOH HOH . 
L 8 HOH C 72 1272 105 HOH HOH . 
L 8 HOH C 73 1273 110 HOH HOH . 
L 8 HOH C 74 1274 122 HOH HOH . 
L 8 HOH C 75 1275 65 HOH HOH . 
L 8 HOH C 76 1276 106 HOH HOH . 
L 8 HOH C 77 1277 66 HOH HOH . 
L 8 HOH C 78 1278 51 HOH HOH . 
L 8 HOH C 79 1279 34 HOH HOH . 
L 8 HOH C 80 1280 141 HOH HOH . 
L 8 HOH C 81 1281 57 HOH HOH . 
L 8 HOH C 82 1282 83 HOH HOH . 
L 8 HOH C 83 1283 32 HOH HOH . 
L 8 HOH C 84 1284 38 HOH HOH . 
L 8 HOH C 85 1285 75 HOH HOH . 
L 8 HOH C 86 1286 21 HOH HOH . 
L 8 HOH C 87 1287 61 HOH HOH . 
L 8 HOH C 88 1288 121 HOH HOH . 
L 8 HOH C 89 1289 104 HOH HOH . 
L 8 HOH C 90 1290 3 HOH HOH . 
L 8 HOH C 91 1291 97 HOH HOH . 
L 8 HOH C 92 1292 33 HOH HOH . 
L 8 HOH C 93 1293 68 HOH HOH . 
L 8 HOH C 94 1294 80 HOH HOH . 
L 8 HOH C 95 1295 62 HOH HOH . 
L 8 HOH C 96 1296 55 HOH HOH . 
L 8 HOH C 97 1297 91 HOH HOH . 
L 8 HOH C 98 1298 81 HOH HOH . 
L 8 HOH C 99 1299 117 HOH HOH . 
L 8 HOH C 100 1300 69 HOH HOH . 
L 8 HOH C 101 1301 82 HOH HOH . 
L 8 HOH C 102 1302 137 HOH HOH . 
L 8 HOH C 103 1303 79 HOH HOH . 
L 8 HOH C 104 1304 67 HOH HOH . 
L 8 HOH C 105 1305 149 HOH HOH . 
L 8 HOH C 106 1306 76 HOH HOH . 
L 8 HOH C 107 1307 96 HOH HOH . 
L 8 HOH C 108 1308 8 HOH HOH . 
L 8 HOH C 109 1309 89 HOH HOH . 
L 8 HOH C 110 1310 113 HOH HOH . 
L 8 HOH C 111 1311 166 HOH HOH . 
L 8 HOH C 112 1312 156 HOH HOH . 
L 8 HOH C 113 1313 85 HOH HOH . 
L 8 HOH C 114 1314 168 HOH HOH . 
L 8 HOH C 115 1315 136 HOH HOH . 
L 8 HOH C 116 1316 60 HOH HOH . 
L 8 HOH C 117 1317 145 HOH HOH . 
L 8 HOH C 118 1318 167 HOH HOH . 
L 8 HOH C 119 1319 108 HOH HOH . 
L 8 HOH C 120 1320 49 HOH HOH . 
L 8 HOH C 121 1321 90 HOH HOH . 
L 8 HOH C 122 1322 132 HOH HOH . 
L 8 HOH C 123 1323 146 HOH HOH . 
L 8 HOH C 124 1324 154 HOH HOH . 
L 8 HOH C 125 1325 165 HOH HOH . 
L 8 HOH C 126 1326 148 HOH HOH . 
L 8 HOH C 127 1327 93 HOH HOH . 
L 8 HOH C 128 1328 64 HOH HOH . 
L 8 HOH C 129 1329 128 HOH HOH . 
L 8 HOH C 130 1330 147 HOH HOH . 
L 8 HOH C 131 1331 155 HOH HOH . 
L 8 HOH C 132 1332 144 HOH HOH . 
L 8 HOH C 133 1333 152 HOH HOH . 
L 8 HOH C 134 1334 87 HOH HOH . 
L 8 HOH C 135 1335 114 HOH HOH . 
L 8 HOH C 136 1336 112 HOH HOH . 
L 8 HOH C 137 1337 140 HOH HOH . 
L 8 HOH C 138 1338 139 HOH HOH . 
L 8 HOH C 139 1339 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 7 -39.987 66.36 1.412 0 66.45 ? C1 GOL 1101 C 1 
HETATM 2 O O1 GOL . . . H 7 -41.179 65.622 1.568 0 66.16 ? O1 GOL 1101 C 1 
HETATM 3 C C2 GOL . . . H 7 -39.44 66.148 0.005 0 66.75 ? C2 GOL 1101 C 1 
HETATM 4 O O2 GOL . . . H 7 -40.467 65.664 -0.832 0 65.95 ? O2 GOL 1101 C 1 
HETATM 5 C C3 GOL . . . H 7 -38.917 67.471 -0.543 0 67.87 ? C3 GOL 1101 C 1 
HETATM 6 O O3 GOL . . . H 7 -37.828 67.906 0.24 0 68.31 ? O3 GOL 1101 C 1 
#
_model_server_stats.io_time_ms              80 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    40 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#