data_6X39 # _model_server_result.job_id zJDpvrbSVPYZsjWj63gMKA _model_server_result.datetime_utc '2024-11-06 01:53:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6x39 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 6X39 # _exptl.entry_id 6X39 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 182.172 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description sorbitol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6X39 _cell.length_a 86.11 _cell.length_b 86.11 _cell.length_c 29.344 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6X39 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O6' _chem_comp.formula_weight 182.172 _chem_comp.id SOR _chem_comp.mon_nstd_flag . _chem_comp.name sorbitol _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms D-sorbitol;D-glucitol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 SOR sing 254 n n C1 O1 SOR sing 255 n n C1 H11 SOR sing 256 n n C1 H12 SOR sing 257 n n C2 C3 SOR sing 258 n n C2 O2 SOR sing 259 n n C2 H2 SOR sing 260 n n C3 C4 SOR sing 261 n n C3 O3 SOR sing 262 n n C3 H3 SOR sing 263 n n C4 C5 SOR sing 264 n n C4 O4 SOR sing 265 n n C4 H4 SOR sing 266 n n C5 C6 SOR sing 267 n n C5 O5 SOR sing 268 n n C5 H5 SOR sing 269 n n C6 O6 SOR sing 270 n n C6 H61 SOR sing 271 n n C6 H62 SOR sing 272 n n O1 HO1 SOR sing 273 n n O2 HO2 SOR sing 274 n n O3 HO3 SOR sing 275 n n O4 HO4 SOR sing 276 n n O5 HO5 SOR sing 277 n n O6 HO6 SOR sing 278 n n # _atom_sites.entry_id 6X39 _atom_sites.fract_transf_matrix[1][1] 0.011613 _atom_sites.fract_transf_matrix[1][2] 0.006705 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01341 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.034079 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SOR A 1 901 901 SOR SOR . C 3 HOH A 1 1001 78 HOH HOH . C 3 HOH A 2 1002 115 HOH HOH . C 3 HOH A 3 1003 51 HOH HOH . C 3 HOH A 4 1004 85 HOH HOH . C 3 HOH A 5 1005 134 HOH HOH . C 3 HOH A 6 1006 141 HOH HOH . C 3 HOH A 7 1007 77 HOH HOH . C 3 HOH A 8 1008 94 HOH HOH . C 3 HOH A 9 1009 100 HOH HOH . C 3 HOH A 10 1010 12 HOH HOH . C 3 HOH A 11 1011 62 HOH HOH . C 3 HOH A 12 1012 133 HOH HOH . C 3 HOH A 13 1013 111 HOH HOH . C 3 HOH A 14 1014 36 HOH HOH . C 3 HOH A 15 1015 61 HOH HOH . C 3 HOH A 16 1016 153 HOH HOH . C 3 HOH A 17 1017 19 HOH HOH . C 3 HOH A 18 1018 74 HOH HOH . C 3 HOH A 19 1019 154 HOH HOH . C 3 HOH A 20 1020 9 HOH HOH . C 3 HOH A 21 1021 140 HOH HOH . C 3 HOH A 22 1022 14 HOH HOH . C 3 HOH A 23 1023 7 HOH HOH . C 3 HOH A 24 1024 86 HOH HOH . C 3 HOH A 25 1025 109 HOH HOH . C 3 HOH A 26 1026 21 HOH HOH . C 3 HOH A 27 1027 4 HOH HOH . C 3 HOH A 28 1028 138 HOH HOH . C 3 HOH A 29 1029 41 HOH HOH . C 3 HOH A 30 1030 54 HOH HOH . C 3 HOH A 31 1031 47 HOH HOH . C 3 HOH A 32 1032 65 HOH HOH . C 3 HOH A 33 1033 103 HOH HOH . C 3 HOH A 34 1034 73 HOH HOH . C 3 HOH A 35 1035 95 HOH HOH . C 3 HOH A 36 1036 26 HOH HOH . C 3 HOH A 37 1037 37 HOH HOH . C 3 HOH A 38 1038 119 HOH HOH . C 3 HOH A 39 1039 25 HOH HOH . C 3 HOH A 40 1040 10 HOH HOH . C 3 HOH A 41 1041 17 HOH HOH . C 3 HOH A 42 1042 132 HOH HOH . C 3 HOH A 43 1043 46 HOH HOH . C 3 HOH A 44 1044 137 HOH HOH . C 3 HOH A 45 1045 18 HOH HOH . C 3 HOH A 46 1046 81 HOH HOH . C 3 HOH A 47 1047 92 HOH HOH . C 3 HOH A 48 1048 63 HOH HOH . C 3 HOH A 49 1049 80 HOH HOH . C 3 HOH A 50 1050 93 HOH HOH . C 3 HOH A 51 1051 29 HOH HOH . C 3 HOH A 52 1052 2 HOH HOH . C 3 HOH A 53 1053 145 HOH HOH . C 3 HOH A 54 1054 56 HOH HOH . C 3 HOH A 55 1055 71 HOH HOH . C 3 HOH A 56 1056 30 HOH HOH . C 3 HOH A 57 1057 116 HOH HOH . C 3 HOH A 58 1058 76 HOH HOH . C 3 HOH A 59 1059 125 HOH HOH . C 3 HOH A 60 1060 20 HOH HOH . C 3 HOH A 61 1061 159 HOH HOH . C 3 HOH A 62 1062 104 HOH HOH . C 3 HOH A 63 1063 117 HOH HOH . C 3 HOH A 64 1064 34 HOH HOH . C 3 HOH A 65 1065 23 HOH HOH . C 3 HOH A 66 1066 122 HOH HOH . C 3 HOH A 67 1067 75 HOH HOH . C 3 HOH A 68 1068 128 HOH HOH . C 3 HOH A 69 1069 68 HOH HOH . C 3 HOH A 70 1070 107 HOH HOH . C 3 HOH A 71 1071 127 HOH HOH . C 3 HOH A 72 1072 58 HOH HOH . C 3 HOH A 73 1073 39 HOH HOH . C 3 HOH A 74 1074 79 HOH HOH . C 3 HOH A 75 1075 48 HOH HOH . C 3 HOH A 76 1076 98 HOH HOH . C 3 HOH A 77 1077 160 HOH HOH . C 3 HOH A 78 1078 15 HOH HOH . C 3 HOH A 79 1079 45 HOH HOH . C 3 HOH A 80 1080 69 HOH HOH . C 3 HOH A 81 1081 5 HOH HOH . C 3 HOH A 82 1082 87 HOH HOH . C 3 HOH A 83 1083 156 HOH HOH . C 3 HOH A 84 1084 149 HOH HOH . C 3 HOH A 85 1085 124 HOH HOH . C 3 HOH A 86 1086 44 HOH HOH . C 3 HOH A 87 1087 126 HOH HOH . C 3 HOH A 88 1088 120 HOH HOH . C 3 HOH A 89 1089 121 HOH HOH . C 3 HOH A 90 1090 55 HOH HOH . C 3 HOH A 91 1091 90 HOH HOH . C 3 HOH A 92 1092 112 HOH HOH . C 3 HOH A 93 1093 102 HOH HOH . C 3 HOH A 94 1094 151 HOH HOH . C 3 HOH A 95 1095 131 HOH HOH . C 3 HOH A 96 1096 42 HOH HOH . C 3 HOH A 97 1097 83 HOH HOH . C 3 HOH A 98 1098 105 HOH HOH . C 3 HOH A 99 1099 64 HOH HOH . C 3 HOH A 100 1100 155 HOH HOH . C 3 HOH A 101 1101 88 HOH HOH . C 3 HOH A 102 1102 158 HOH HOH . C 3 HOH A 103 1103 143 HOH HOH . C 3 HOH A 104 1104 89 HOH HOH . C 3 HOH A 105 1105 148 HOH HOH . C 3 HOH A 106 1106 67 HOH HOH . C 3 HOH A 107 1107 43 HOH HOH . C 3 HOH A 108 1108 33 HOH HOH . C 3 HOH A 109 1109 27 HOH HOH . C 3 HOH A 110 1110 66 HOH HOH . C 3 HOH A 111 1111 110 HOH HOH . C 3 HOH A 112 1112 60 HOH HOH . C 3 HOH A 113 1113 70 HOH HOH . C 3 HOH A 114 1114 57 HOH HOH . C 3 HOH A 115 1115 136 HOH HOH . C 3 HOH A 116 1116 99 HOH HOH . C 3 HOH A 117 1117 147 HOH HOH . C 3 HOH A 118 1118 161 HOH HOH . C 3 HOH A 119 1119 157 HOH HOH . C 3 HOH A 120 1120 50 HOH HOH . C 3 HOH A 121 1121 72 HOH HOH . C 3 HOH A 122 1122 139 HOH HOH . C 3 HOH A 123 1123 142 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SOR . . . B 2 19.206 31.675 -4.678 1 19.79 ? C1 SOR 901 A 1 HETATM 2 C C2 SOR . . . B 2 18.487 31.573 -6.027 1 34.13 ? C2 SOR 901 A 1 HETATM 3 C C3 SOR . . . B 2 16.94 31.543 -5.769 1 15.95 ? C3 SOR 901 A 1 HETATM 4 C C4 SOR . . . B 2 16.089 32.521 -6.6 1 11.92 ? C4 SOR 901 A 1 HETATM 5 C C5 SOR . . . B 2 14.831 31.703 -6.911 1 15.93 ? C5 SOR 901 A 1 HETATM 6 C C6 SOR . . . B 2 13.855 32.564 -7.699 1 9.83 ? C6 SOR 901 A 1 HETATM 7 O O1 SOR . . . B 2 20.575 32.053 -4.677 1 10.97 ? O1 SOR 901 A 1 HETATM 8 O O2 SOR . . . B 2 18.981 32.463 -7.011 1 14.53 ? O2 SOR 901 A 1 HETATM 9 O O3 SOR . . . B 2 16.572 31.621 -4.37 1 15.25 ? O3 SOR 901 A 1 HETATM 10 O O4 SOR . . . B 2 15.773 33.737 -5.916 1 10.81 ? O4 SOR 901 A 1 HETATM 11 O O5 SOR . . . B 2 15.073 30.578 -7.733 1 34.56 ? O5 SOR 901 A 1 HETATM 12 O O6 SOR . . . B 2 13.397 31.833 -8.792 1 68.93 ? O6 SOR 901 A 1 HETATM 13 H H11 SOR . . . B 2 19.147 30.805 -4.253 1 23.75 ? H11 SOR 901 A 1 HETATM 14 H H12 SOR . . . B 2 18.727 32.328 -4.144 1 23.75 ? H12 SOR 901 A 1 HETATM 15 H H2 SOR . . . B 2 18.697 30.732 -6.462 1 40.95 ? H2 SOR 901 A 1 HETATM 16 H H3 SOR . . . B 2 16.716 30.658 -6.097 1 19.14 ? H3 SOR 901 A 1 HETATM 17 H H4 SOR . . . B 2 16.561 32.829 -7.389 1 14.3 ? H4 SOR 901 A 1 HETATM 18 H H5 SOR . . . B 2 14.494 31.411 -6.049 1 19.11 ? H5 SOR 901 A 1 HETATM 19 H H61 SOR . . . B 2 14.303 33.366 -8.008 1 11.8 ? H61 SOR 901 A 1 HETATM 20 H H62 SOR . . . B 2 13.106 32.809 -7.134 1 11.8 ? H62 SOR 901 A 1 HETATM 21 H HO1 SOR . . . B 2 20.841 32.182 -5.474 1 13.16 ? HO1 SOR 901 A 1 HETATM 22 H HO2 SOR . . . B 2 18.802 32.153 -7.778 1 17.44 ? HO2 SOR 901 A 1 HETATM 23 H HO3 SOR . . . B 2 15.994 32.241 -4.268 1 18.31 ? HO3 SOR 901 A 1 HETATM 24 H HO4 SOR . . . B 2 14.946 33.755 -5.757 1 12.97 ? HO4 SOR 901 A 1 HETATM 25 H HO5 SOR . . . B 2 14.673 30.673 -8.472 1 41.47 ? HO5 SOR 901 A 1 HETATM 26 H HO6 SOR . . . B 2 12.88 32.319 -9.261 1 82.71 ? HO6 SOR 901 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 26 #