data_6X4B # _model_server_result.job_id fqIs-isal9AYH137h0E_mA _model_server_result.datetime_utc '2024-10-25 20:28:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6x4b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":604}' # _entry.id 6X4B # _exptl.entry_id 6X4B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.77 _cell.angle_gamma 90 _cell.entry_id 6X4B _cell.length_a 221.253 _cell.length_b 67.396 _cell.length_c 102.907 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6X4B _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 445 A ASP 443 1_555 G MG MG . A MG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.892 ? metalc ? metalc2 A OE2 GLU 480 A GLU 478 1_555 G MG MG . A MG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc3 A OD1 ASP 500 A ASP 498 1_555 G MG MG . A MG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc4 A OD2 ASP 500 A ASP 498 1_555 G MG MG . A MG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 6X4B _atom_sites.fract_transf_matrix[1][1] 0.00452 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001449 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014838 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010204 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 UMY A 1 601 1 UMY 655 . D 4 SO4 A 1 602 1 SO4 SO4 . E 4 SO4 A 1 603 2 SO4 SO4 . F 4 SO4 A 1 604 3 SO4 SO4 . G 5 MG A 1 605 1 MG MG . H 4 SO4 B 1 501 4 SO4 SO4 . I 6 HOH A 1 701 1 HOH HOH . I 6 HOH A 2 702 42 HOH HOH . I 6 HOH A 3 703 23 HOH HOH . I 6 HOH A 4 704 26 HOH HOH . I 6 HOH A 5 705 21 HOH HOH . I 6 HOH A 6 706 6 HOH HOH . I 6 HOH A 7 707 24 HOH HOH . I 6 HOH A 8 708 20 HOH HOH . I 6 HOH A 9 709 41 HOH HOH . I 6 HOH A 10 710 43 HOH HOH . I 6 HOH A 11 711 13 HOH HOH . I 6 HOH A 12 712 5 HOH HOH . I 6 HOH A 13 713 16 HOH HOH . I 6 HOH A 14 714 17 HOH HOH . J 6 HOH B 1 601 40 HOH HOH . J 6 HOH B 2 602 31 HOH HOH . J 6 HOH B 3 603 39 HOH HOH . J 6 HOH B 4 604 35 HOH HOH . J 6 HOH B 5 605 7 HOH HOH . J 6 HOH B 6 606 22 HOH HOH . J 6 HOH B 7 607 2 HOH HOH . J 6 HOH B 8 608 9 HOH HOH . J 6 HOH B 9 609 27 HOH HOH . J 6 HOH B 10 610 38 HOH HOH . J 6 HOH B 11 611 3 HOH HOH . J 6 HOH B 12 612 28 HOH HOH . J 6 HOH B 13 613 14 HOH HOH . J 6 HOH B 14 614 4 HOH HOH . J 6 HOH B 15 615 30 HOH HOH . J 6 HOH B 16 616 44 HOH HOH . J 6 HOH B 17 617 32 HOH HOH . J 6 HOH B 18 618 25 HOH HOH . J 6 HOH B 19 619 8 HOH HOH . J 6 HOH B 20 620 37 HOH HOH . J 6 HOH B 21 621 34 HOH HOH . J 6 HOH B 22 622 36 HOH HOH . J 6 HOH B 23 623 10 HOH HOH . J 6 HOH B 24 624 11 HOH HOH . J 6 HOH B 25 625 29 HOH HOH . J 6 HOH B 26 626 12 HOH HOH . J 6 HOH B 27 627 18 HOH HOH . J 6 HOH B 28 628 45 HOH HOH . J 6 HOH B 29 629 33 HOH HOH . J 6 HOH B 30 630 19 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 4 418.347 39.203 145.515 1 100.56 ? S SO4 604 A 1 HETATM 2 O O1 SO4 . . . F 4 418.358 40.65 145.281 1 89.85 ? O1 SO4 604 A 1 HETATM 3 O O2 SO4 . . . F 4 417.722 38.524 144.378 1 75.05 ? O2 SO4 604 A 1 HETATM 4 O O3 SO4 . . . F 4 417.59 38.913 146.733 1 80.7 ? O3 SO4 604 A 1 HETATM 5 O O4 SO4 . . . F 4 419.723 38.724 145.662 1 90.55 ? O4 SO4 604 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #