data_6X4L # _model_server_result.job_id tZk3xMB8Y3YKyHBQmiVAsQ _model_server_result.datetime_utc '2025-07-07 21:07:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6x4l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6X4L # _exptl.entry_id 6X4L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 358.865 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[4-(5-chloropyrazin-2-yl)piperazin-1-yl]-2-[4-(propan-2-yl)phenyl]ethan-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6X4L _cell.length_a 98.514 _cell.length_b 98.514 _cell.length_c 68.82 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6X4L _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_554 x-y,-y,-z-1/3 1 0 0 0 -1 0 0 0 -1 0 0 -22.94 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C O3G ANP . A ANP 402 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? metalc ? metalc2 C O1B ANP . A ANP 402 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc3 D MG MG . A MG 403 1_555 H O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc4 D MG MG . A MG 403 1_555 H O HOH . A HOH 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc5 D MG MG . A MG 403 1_555 H O HOH . A HOH 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc6 D MG MG . A MG 403 1_555 H O HOH . A HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? # _chem_comp.formula 'C19 H23 Cl N4 O' _chem_comp.formula_weight 358.865 _chem_comp.id UOS _chem_comp.mon_nstd_flag . _chem_comp.name 1-[4-(5-chloropyrazin-2-yl)piperazin-1-yl]-2-[4-(propan-2-yl)phenyl]ethan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL01 C02 UOS sing 417 n n C02 C25 UOS doub 418 n y C02 N03 UOS sing 419 n y C25 N24 UOS sing 420 n y N03 C04 UOS doub 421 n y N24 C05 UOS doub 422 n y C04 C05 UOS sing 423 n y C05 N06 UOS sing 424 n n N06 C23 UOS sing 425 n n N06 C07 UOS sing 426 n n C23 C22 UOS sing 427 n n C07 C08 UOS sing 428 n n C22 N09 UOS sing 429 n n C08 N09 UOS sing 430 n n N09 C10 UOS sing 431 n n C10 C11 UOS sing 432 n n C10 O21 UOS doub 433 n n C11 C12 UOS sing 434 n n C13 C12 UOS doub 435 n y C13 C14 UOS sing 436 n y C12 C20 UOS sing 437 n y C14 C15 UOS doub 438 n y C20 C19 UOS doub 439 n y C15 C19 UOS sing 440 n y C15 C16 UOS sing 441 n n C18 C16 UOS sing 442 n n C16 C17 UOS sing 443 n n C04 H1 UOS sing 444 n n C07 H2 UOS sing 445 n n C07 H3 UOS sing 446 n n C08 H4 UOS sing 447 n n C08 H5 UOS sing 448 n n C11 H6 UOS sing 449 n n C11 H7 UOS sing 450 n n C13 H8 UOS sing 451 n n C14 H9 UOS sing 452 n n C16 H10 UOS sing 453 n n C17 H11 UOS sing 454 n n C17 H12 UOS sing 455 n n C17 H13 UOS sing 456 n n C18 H14 UOS sing 457 n n C18 H15 UOS sing 458 n n C18 H16 UOS sing 459 n n C19 H17 UOS sing 460 n n C20 H18 UOS sing 461 n n C22 H19 UOS sing 462 n n C22 H20 UOS sing 463 n n C23 H21 UOS sing 464 n n C23 H22 UOS sing 465 n n C25 H23 UOS sing 466 n n # _atom_sites.entry_id 6X4L _atom_sites.fract_transf_matrix[1][1] 0.010151 _atom_sites.fract_transf_matrix[1][2] 0.005861 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014531 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UOS A 1 401 1 UOS Y86 . C 3 ANP A 1 402 501 ANP ANP . D 4 MG A 1 403 1 MG MG . E 5 EDO A 1 404 1 EDO EDO . F 5 EDO A 1 405 2 EDO EDO . G 6 CL A 1 406 1 CL CL . H 7 HOH A 1 501 182 HOH HOH . H 7 HOH A 2 502 19 HOH HOH . H 7 HOH A 3 503 220 HOH HOH . H 7 HOH A 4 504 57 HOH HOH . H 7 HOH A 5 505 113 HOH HOH . H 7 HOH A 6 506 8 HOH HOH . H 7 HOH A 7 507 46 HOH HOH . H 7 HOH A 8 508 54 HOH HOH . H 7 HOH A 9 509 5 HOH HOH . H 7 HOH A 10 510 70 HOH HOH . H 7 HOH A 11 511 62 HOH HOH . H 7 HOH A 12 512 20 HOH HOH . H 7 HOH A 13 513 10 HOH HOH . H 7 HOH A 14 514 78 HOH HOH . H 7 HOH A 15 515 59 HOH HOH . H 7 HOH A 16 516 29 HOH HOH . H 7 HOH A 17 517 235 HOH HOH . H 7 HOH A 18 518 40 HOH HOH . H 7 HOH A 19 519 55 HOH HOH . H 7 HOH A 20 520 204 HOH HOH . H 7 HOH A 21 521 51 HOH HOH . H 7 HOH A 22 522 2 HOH HOH . H 7 HOH A 23 523 192 HOH HOH . H 7 HOH A 24 524 36 HOH HOH . H 7 HOH A 25 525 227 HOH HOH . H 7 HOH A 26 526 50 HOH HOH . H 7 HOH A 27 527 193 HOH HOH . H 7 HOH A 28 528 26 HOH HOH . H 7 HOH A 29 529 7 HOH HOH . H 7 HOH A 30 530 6 HOH HOH . H 7 HOH A 31 531 152 HOH HOH . H 7 HOH A 32 532 228 HOH HOH . H 7 HOH A 33 533 21 HOH HOH . H 7 HOH A 34 534 211 HOH HOH . H 7 HOH A 35 535 225 HOH HOH . H 7 HOH A 36 536 203 HOH HOH . H 7 HOH A 37 537 11 HOH HOH . H 7 HOH A 38 538 47 HOH HOH . H 7 HOH A 39 539 48 HOH HOH . H 7 HOH A 40 540 226 HOH HOH . H 7 HOH A 41 541 200 HOH HOH . H 7 HOH A 42 542 27 HOH HOH . H 7 HOH A 43 543 221 HOH HOH . H 7 HOH A 44 544 23 HOH HOH . H 7 HOH A 45 545 34 HOH HOH . H 7 HOH A 46 546 4 HOH HOH . H 7 HOH A 47 547 18 HOH HOH . H 7 HOH A 48 548 194 HOH HOH . H 7 HOH A 49 549 66 HOH HOH . H 7 HOH A 50 550 93 HOH HOH . H 7 HOH A 51 551 199 HOH HOH . H 7 HOH A 52 552 60 HOH HOH . H 7 HOH A 53 553 42 HOH HOH . H 7 HOH A 54 554 56 HOH HOH . H 7 HOH A 55 555 189 HOH HOH . H 7 HOH A 56 556 38 HOH HOH . H 7 HOH A 57 557 195 HOH HOH . H 7 HOH A 58 558 236 HOH HOH . H 7 HOH A 59 559 230 HOH HOH . H 7 HOH A 60 560 179 HOH HOH . H 7 HOH A 61 561 37 HOH HOH . H 7 HOH A 62 562 65 HOH HOH . H 7 HOH A 63 563 188 HOH HOH . H 7 HOH A 64 564 153 HOH HOH . H 7 HOH A 65 565 206 HOH HOH . H 7 HOH A 66 566 234 HOH HOH . H 7 HOH A 67 567 76 HOH HOH . H 7 HOH A 68 568 16 HOH HOH . H 7 HOH A 69 569 35 HOH HOH . H 7 HOH A 70 570 210 HOH HOH . H 7 HOH A 71 571 162 HOH HOH . H 7 HOH A 72 572 49 HOH HOH . H 7 HOH A 73 573 184 HOH HOH . H 7 HOH A 74 574 33 HOH HOH . H 7 HOH A 75 575 82 HOH HOH . H 7 HOH A 76 576 214 HOH HOH . H 7 HOH A 77 577 61 HOH HOH . H 7 HOH A 78 578 202 HOH HOH . H 7 HOH A 79 579 198 HOH HOH . H 7 HOH A 80 580 218 HOH HOH . H 7 HOH A 81 581 161 HOH HOH . H 7 HOH A 82 582 219 HOH HOH . H 7 HOH A 83 583 213 HOH HOH . H 7 HOH A 84 584 197 HOH HOH . H 7 HOH A 85 585 216 HOH HOH . H 7 HOH A 86 586 208 HOH HOH . H 7 HOH A 87 587 103 HOH HOH . H 7 HOH A 88 588 231 HOH HOH . H 7 HOH A 89 589 127 HOH HOH . H 7 HOH A 90 590 205 HOH HOH . H 7 HOH A 91 591 196 HOH HOH . H 7 HOH A 92 592 209 HOH HOH . H 7 HOH A 93 593 237 HOH HOH . H 7 HOH A 94 594 215 HOH HOH . H 7 HOH A 95 595 122 HOH HOH . H 7 HOH A 96 596 233 HOH HOH . H 7 HOH A 97 597 156 HOH HOH . H 7 HOH A 98 598 217 HOH HOH . H 7 HOH A 99 599 58 HOH HOH . H 7 HOH A 100 600 207 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 UOS . . . B 2 -36.241 -7.073 -17.484 1 41.77 ? C02 UOS 401 A 1 HETATM 2 C C04 UOS . . . B 2 -36.776 -8.099 -15.514 1 49.47 ? C04 UOS 401 A 1 HETATM 3 C C05 UOS . . . B 2 -35.44 -8.437 -15.403 1 42.47 ? C05 UOS 401 A 1 HETATM 4 C C07 UOS . . . B 2 -36.037 -9.583 -13.226 1 48.76 ? C07 UOS 401 A 1 HETATM 5 C C08 UOS . . . B 2 -35.621 -10.818 -12.45 1 46.84 ? C08 UOS 401 A 1 HETATM 6 C C10 UOS . . . B 2 -33.871 -11.062 -10.721 1 40.8 ? C10 UOS 401 A 1 HETATM 7 C C11 UOS . . . B 2 -32.393 -11.035 -10.353 1 37.77 ? C11 UOS 401 A 1 HETATM 8 C C12 UOS . . . B 2 -32.212 -11.899 -9.116 1 41.39 ? C12 UOS 401 A 1 HETATM 9 C C13 UOS . . . B 2 -32.205 -13.286 -9.212 1 39.35 ? C13 UOS 401 A 1 HETATM 10 C C14 UOS . . . B 2 -32.039 -14.048 -8.055 1 37.05 ? C14 UOS 401 A 1 HETATM 11 C C15 UOS . . . B 2 -31.903 -13.418 -6.822 1 37.88 ? C15 UOS 401 A 1 HETATM 12 C C16 UOS . . . B 2 -31.744 -14.238 -5.528 1 37.57 ? C16 UOS 401 A 1 HETATM 13 C C17 UOS . . . B 2 -32.997 -15.065 -5.252 1 34.2 ? C17 UOS 401 A 1 HETATM 14 C C18 UOS . . . B 2 -30.505 -15.12 -5.533 1 41.94 ? C18 UOS 401 A 1 HETATM 15 C C19 UOS . . . B 2 -31.928 -12.033 -6.737 1 37.54 ? C19 UOS 401 A 1 HETATM 16 C C20 UOS . . . B 2 -32.09 -11.271 -7.887 1 36.48 ? C20 UOS 401 A 1 HETATM 17 C C22 UOS . . . B 2 -33.332 -10.493 -13.077 1 56.58 ? C22 UOS 401 A 1 HETATM 18 C C23 UOS . . . B 2 -33.648 -9.167 -13.74 1 47.68 ? C23 UOS 401 A 1 HETATM 19 C C25 UOS . . . B 2 -34.912 -7.425 -17.356 1 43.5 ? C25 UOS 401 A 1 HETATM 20 N N03 UOS . . . B 2 -37.134 -7.411 -16.573 1 48.99 ? N03 UOS 401 A 1 HETATM 21 N N06 UOS . . . B 2 -35.035 -9.205 -14.265 1 49.48 ? N06 UOS 401 A 1 HETATM 22 N N09 UOS . . . B 2 -34.267 -10.801 -12.074 1 53.11 ? N09 UOS 401 A 1 HETATM 23 N N24 UOS . . . B 2 -34.54 -8.115 -16.305 1 43.52 ? N24 UOS 401 A 1 HETATM 24 O O21 UOS . . . B 2 -34.715 -11.311 -9.927 1 38.51 ? O21 UOS 401 A 1 HETATM 25 CL CL01 UOS . . . B 2 -36.754 -6.154 -18.915 1 47.94 ? CL01 UOS 401 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #