data_6X5G # _model_server_result.job_id souuVByNw88l4ONi7w0J8Q _model_server_result.datetime_utc '2024-11-04 20:34:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6x5g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6X5G # _exptl.entry_id 6X5G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.78 _cell.angle_gamma 90 _cell.entry_id 6X5G _cell.length_a 36.29 _cell.length_b 66.173 _cell.length_c 61.706 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6X5G _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 152 n n C1 C2 GOL sing 153 n n C1 H11 GOL sing 154 n n C1 H12 GOL sing 155 n n O1 HO1 GOL sing 156 n n C2 O2 GOL sing 157 n n C2 C3 GOL sing 158 n n C2 H2 GOL sing 159 n n O2 HO2 GOL sing 160 n n C3 O3 GOL sing 161 n n C3 H31 GOL sing 162 n n C3 H32 GOL sing 163 n n O3 HO3 GOL sing 164 n n # _atom_sites.entry_id 6X5G _atom_sites.fract_transf_matrix[1][1] 0.027556 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004749 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016445 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 301 1 GOL GOL . D 3 GOL A 1 302 4 GOL GOL . E 4 BCN A 1 303 1 BCN BCN . F 5 HOH A 1 401 82 HOH HOH . F 5 HOH A 2 402 113 HOH HOH . F 5 HOH A 3 403 105 HOH HOH . F 5 HOH A 4 404 92 HOH HOH . F 5 HOH A 5 405 96 HOH HOH . F 5 HOH A 6 406 116 HOH HOH . F 5 HOH A 7 407 98 HOH HOH . F 5 HOH A 8 408 101 HOH HOH . F 5 HOH A 9 409 30 HOH HOH . F 5 HOH A 10 410 67 HOH HOH . F 5 HOH A 11 411 89 HOH HOH . F 5 HOH A 12 412 117 HOH HOH . F 5 HOH A 13 413 48 HOH HOH . F 5 HOH A 14 414 77 HOH HOH . F 5 HOH A 15 415 20 HOH HOH . F 5 HOH A 16 416 54 HOH HOH . F 5 HOH A 17 417 61 HOH HOH . F 5 HOH A 18 418 16 HOH HOH . F 5 HOH A 19 419 15 HOH HOH . F 5 HOH A 20 420 55 HOH HOH . F 5 HOH A 21 421 34 HOH HOH . F 5 HOH A 22 422 79 HOH HOH . F 5 HOH A 23 423 56 HOH HOH . F 5 HOH A 24 424 109 HOH HOH . F 5 HOH A 25 425 18 HOH HOH . F 5 HOH A 26 426 115 HOH HOH . F 5 HOH A 27 427 100 HOH HOH . F 5 HOH A 28 428 86 HOH HOH . F 5 HOH A 29 429 65 HOH HOH . F 5 HOH A 30 430 81 HOH HOH . F 5 HOH A 31 431 107 HOH HOH . F 5 HOH A 32 432 29 HOH HOH . F 5 HOH A 33 433 19 HOH HOH . F 5 HOH A 34 434 76 HOH HOH . F 5 HOH A 35 435 52 HOH HOH . F 5 HOH A 36 436 31 HOH HOH . F 5 HOH A 37 437 28 HOH HOH . F 5 HOH A 38 438 23 HOH HOH . F 5 HOH A 39 439 11 HOH HOH . F 5 HOH A 40 440 38 HOH HOH . F 5 HOH A 41 441 25 HOH HOH . F 5 HOH A 42 442 80 HOH HOH . F 5 HOH A 43 443 27 HOH HOH . F 5 HOH A 44 444 6 HOH HOH . F 5 HOH A 45 445 59 HOH HOH . F 5 HOH A 46 446 10 HOH HOH . F 5 HOH A 47 447 110 HOH HOH . F 5 HOH A 48 448 5 HOH HOH . F 5 HOH A 49 449 60 HOH HOH . F 5 HOH A 50 450 9 HOH HOH . F 5 HOH A 51 451 62 HOH HOH . F 5 HOH A 52 452 39 HOH HOH . F 5 HOH A 53 453 70 HOH HOH . F 5 HOH A 54 454 7 HOH HOH . F 5 HOH A 55 455 26 HOH HOH . F 5 HOH A 56 456 22 HOH HOH . F 5 HOH A 57 457 17 HOH HOH . F 5 HOH A 58 458 12 HOH HOH . F 5 HOH A 59 459 37 HOH HOH . F 5 HOH A 60 460 103 HOH HOH . F 5 HOH A 61 461 50 HOH HOH . F 5 HOH A 62 462 2 HOH HOH . F 5 HOH A 63 463 43 HOH HOH . F 5 HOH A 64 464 24 HOH HOH . F 5 HOH A 65 465 35 HOH HOH . F 5 HOH A 66 466 46 HOH HOH . F 5 HOH A 67 467 87 HOH HOH . F 5 HOH A 68 468 64 HOH HOH . F 5 HOH A 69 469 21 HOH HOH . F 5 HOH A 70 470 8 HOH HOH . F 5 HOH A 71 471 71 HOH HOH . F 5 HOH A 72 472 108 HOH HOH . F 5 HOH A 73 473 14 HOH HOH . F 5 HOH A 74 474 57 HOH HOH . F 5 HOH A 75 475 4 HOH HOH . F 5 HOH A 76 476 41 HOH HOH . F 5 HOH A 77 477 1 HOH HOH . F 5 HOH A 78 478 3 HOH HOH . F 5 HOH A 79 479 32 HOH HOH . F 5 HOH A 80 480 51 HOH HOH . F 5 HOH A 81 481 99 HOH HOH . F 5 HOH A 82 482 36 HOH HOH . F 5 HOH A 83 483 73 HOH HOH . F 5 HOH A 84 484 78 HOH HOH . F 5 HOH A 85 485 102 HOH HOH . F 5 HOH A 86 486 74 HOH HOH . F 5 HOH A 87 487 49 HOH HOH . F 5 HOH A 88 488 84 HOH HOH . F 5 HOH A 89 489 72 HOH HOH . F 5 HOH A 90 490 68 HOH HOH . F 5 HOH A 91 491 45 HOH HOH . F 5 HOH A 92 492 53 HOH HOH . F 5 HOH A 93 493 75 HOH HOH . F 5 HOH A 94 494 88 HOH HOH . F 5 HOH A 95 495 83 HOH HOH . F 5 HOH A 96 496 33 HOH HOH . F 5 HOH A 97 497 47 HOH HOH . F 5 HOH A 98 498 111 HOH HOH . G 5 HOH B 1 901 42 HOH HOH . G 5 HOH B 2 902 95 HOH HOH . G 5 HOH B 3 903 44 HOH HOH . G 5 HOH B 4 904 94 HOH HOH . G 5 HOH B 5 905 66 HOH HOH . G 5 HOH B 6 906 93 HOH HOH . G 5 HOH B 7 907 112 HOH HOH . G 5 HOH B 8 908 40 HOH HOH . G 5 HOH B 9 909 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 1.415 -19.129 -4.23 1 50.95 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . C 3 1.26 -20.543 -4.31 1 51.27 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . C 3 1.998 -18.542 -5.5 1 53.96 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . C 3 1.166 -18.825 -6.627 1 48.95 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . C 3 2.191 -17.045 -5.406 1 53.31 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . C 3 2.689 -16.508 -6.624 1 44.25 ? O3 GOL 301 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #