data_6X6Y
#
_model_server_result.job_id            lTF4IpaAzpDMPjBzTdTyYg 
_model_server_result.datetime_utc      '2025-01-10 12:51:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6x6y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    6X6Y 
#
_exptl.entry_id    6X6Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6X6Y 
_cell.length_a            175.483 
_cell.length_b            175.483 
_cell.length_c            124.81 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6X6Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4,5,6 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 124.81 
5 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 124.81 
6 'crystal symmetry operation' 6_556 -x,-x+y,-z+1 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 124.81 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     6X6Y 
_atom_sites.fract_transf_matrix[1][1]    0.005699 
_atom_sites.fract_transf_matrix[1][2]    0.00329 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00658 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008012 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 USY AAA 1 501 502 USY N89 . 
C 3 GOL AAA 1 502 1 GOL GOL . 
D 4 DMS AAA 1 503 3 DMS DMS . 
E 4 DMS AAA 1 504 4 DMS DMS . 
F 3 GOL AAA 1 505 5 GOL GOL . 
G 5 PEG AAA 1 506 6 PEG PEG . 
H 3 GOL AAA 1 507 9 GOL GOL . 
I 3 GOL AAA 1 508 10 GOL GOL . 
J 3 GOL AAA 1 509 11 GOL GOL . 
K 3 GOL AAA 1 510 12 GOL GOL . 
L 6 CL AAA 1 511 1 CL CL . 
M 7 HOH AAA 1 601 54 HOH HOH . 
M 7 HOH AAA 2 602 60 HOH HOH . 
M 7 HOH AAA 3 603 360 HOH HOH . 
M 7 HOH AAA 4 604 416 HOH HOH . 
M 7 HOH AAA 5 605 381 HOH HOH . 
M 7 HOH AAA 6 606 129 HOH HOH . 
M 7 HOH AAA 7 607 450 HOH HOH . 
M 7 HOH AAA 8 608 385 HOH HOH . 
M 7 HOH AAA 9 609 41 HOH HOH . 
M 7 HOH AAA 10 610 365 HOH HOH . 
M 7 HOH AAA 11 611 362 HOH HOH . 
M 7 HOH AAA 12 612 201 HOH HOH . 
M 7 HOH AAA 13 613 443 HOH HOH . 
M 7 HOH AAA 14 614 65 HOH HOH . 
M 7 HOH AAA 15 615 406 HOH HOH . 
M 7 HOH AAA 16 616 130 HOH HOH . 
M 7 HOH AAA 17 617 501 HOH HOH . 
M 7 HOH AAA 18 618 133 HOH HOH . 
M 7 HOH AAA 19 619 438 HOH HOH . 
M 7 HOH AAA 20 620 114 HOH HOH . 
M 7 HOH AAA 21 621 96 HOH HOH . 
M 7 HOH AAA 22 622 12 HOH HOH . 
M 7 HOH AAA 23 623 53 HOH HOH . 
M 7 HOH AAA 24 624 393 HOH HOH . 
M 7 HOH AAA 25 625 235 HOH HOH . 
M 7 HOH AAA 26 626 81 HOH HOH . 
M 7 HOH AAA 27 627 498 HOH HOH . 
M 7 HOH AAA 28 628 374 HOH HOH . 
M 7 HOH AAA 29 629 285 HOH HOH . 
M 7 HOH AAA 30 630 408 HOH HOH . 
M 7 HOH AAA 31 631 411 HOH HOH . 
M 7 HOH AAA 32 632 281 HOH HOH . 
M 7 HOH AAA 33 633 462 HOH HOH . 
M 7 HOH AAA 34 634 513 HOH HOH . 
M 7 HOH AAA 35 635 448 HOH HOH . 
M 7 HOH AAA 36 636 496 HOH HOH . 
M 7 HOH AAA 37 637 88 HOH HOH . 
M 7 HOH AAA 38 638 100 HOH HOH . 
M 7 HOH AAA 39 639 33 HOH HOH . 
M 7 HOH AAA 40 640 271 HOH HOH . 
M 7 HOH AAA 41 641 8 HOH HOH . 
M 7 HOH AAA 42 642 5 HOH HOH . 
M 7 HOH AAA 43 643 7 HOH HOH . 
M 7 HOH AAA 44 644 440 HOH HOH . 
M 7 HOH AAA 45 645 20 HOH HOH . 
M 7 HOH AAA 46 646 216 HOH HOH . 
M 7 HOH AAA 47 647 356 HOH HOH . 
M 7 HOH AAA 48 648 75 HOH HOH . 
M 7 HOH AAA 49 649 409 HOH HOH . 
M 7 HOH AAA 50 650 286 HOH HOH . 
M 7 HOH AAA 51 651 520 HOH HOH . 
M 7 HOH AAA 52 652 503 HOH HOH . 
M 7 HOH AAA 53 653 500 HOH HOH . 
M 7 HOH AAA 54 654 397 HOH HOH . 
M 7 HOH AAA 55 655 13 HOH HOH . 
M 7 HOH AAA 56 656 23 HOH HOH . 
M 7 HOH AAA 57 657 11 HOH HOH . 
M 7 HOH AAA 58 658 442 HOH HOH . 
M 7 HOH AAA 59 659 383 HOH HOH . 
M 7 HOH AAA 60 660 376 HOH HOH . 
M 7 HOH AAA 61 661 47 HOH HOH . 
M 7 HOH AAA 62 662 27 HOH HOH . 
M 7 HOH AAA 63 663 239 HOH HOH . 
M 7 HOH AAA 64 664 449 HOH HOH . 
M 7 HOH AAA 65 665 16 HOH HOH . 
M 7 HOH AAA 66 666 295 HOH HOH . 
M 7 HOH AAA 67 667 192 HOH HOH . 
M 7 HOH AAA 68 668 474 HOH HOH . 
M 7 HOH AAA 69 669 14 HOH HOH . 
M 7 HOH AAA 70 670 31 HOH HOH . 
M 7 HOH AAA 71 671 1 HOH HOH . 
M 7 HOH AAA 72 672 426 HOH HOH . 
M 7 HOH AAA 73 673 22 HOH HOH . 
M 7 HOH AAA 74 674 205 HOH HOH . 
M 7 HOH AAA 75 675 29 HOH HOH . 
M 7 HOH AAA 76 676 363 HOH HOH . 
M 7 HOH AAA 77 677 488 HOH HOH . 
M 7 HOH AAA 78 678 484 HOH HOH . 
M 7 HOH AAA 79 679 463 HOH HOH . 
M 7 HOH AAA 80 680 78 HOH HOH . 
M 7 HOH AAA 81 681 242 HOH HOH . 
M 7 HOH AAA 82 682 15 HOH HOH . 
M 7 HOH AAA 83 683 415 HOH HOH . 
M 7 HOH AAA 84 684 471 HOH HOH . 
M 7 HOH AAA 85 685 207 HOH HOH . 
M 7 HOH AAA 86 686 477 HOH HOH . 
M 7 HOH AAA 87 687 401 HOH HOH . 
M 7 HOH AAA 88 688 479 HOH HOH . 
M 7 HOH AAA 89 689 412 HOH HOH . 
M 7 HOH AAA 90 690 380 HOH HOH . 
M 7 HOH AAA 91 691 387 HOH HOH . 
M 7 HOH AAA 92 692 70 HOH HOH . 
M 7 HOH AAA 93 693 173 HOH HOH . 
M 7 HOH AAA 94 694 369 HOH HOH . 
M 7 HOH AAA 95 695 384 HOH HOH . 
M 7 HOH AAA 96 696 36 HOH HOH . 
M 7 HOH AAA 97 697 217 HOH HOH . 
M 7 HOH AAA 98 698 49 HOH HOH . 
M 7 HOH AAA 99 699 354 HOH HOH . 
M 7 HOH AAA 100 700 482 HOH HOH . 
M 7 HOH AAA 101 701 307 HOH HOH . 
M 7 HOH AAA 102 702 234 HOH HOH . 
M 7 HOH AAA 103 703 353 HOH HOH . 
M 7 HOH AAA 104 704 469 HOH HOH . 
M 7 HOH AAA 105 705 367 HOH HOH . 
M 7 HOH AAA 106 706 364 HOH HOH . 
M 7 HOH AAA 107 707 499 HOH HOH . 
M 7 HOH AAA 108 708 451 HOH HOH . 
M 7 HOH AAA 109 709 342 HOH HOH . 
M 7 HOH AAA 110 710 119 HOH HOH . 
M 7 HOH AAA 111 711 45 HOH HOH . 
M 7 HOH AAA 112 712 441 HOH HOH . 
M 7 HOH AAA 113 713 392 HOH HOH . 
M 7 HOH AAA 114 714 377 HOH HOH . 
M 7 HOH AAA 115 715 346 HOH HOH . 
M 7 HOH AAA 116 716 404 HOH HOH . 
M 7 HOH AAA 117 717 427 HOH HOH . 
M 7 HOH AAA 118 718 328 HOH HOH . 
M 7 HOH AAA 119 719 372 HOH HOH . 
M 7 HOH AAA 120 720 344 HOH HOH . 
M 7 HOH AAA 121 721 77 HOH HOH . 
M 7 HOH AAA 122 722 263 HOH HOH . 
M 7 HOH AAA 123 723 111 HOH HOH . 
M 7 HOH AAA 124 724 98 HOH HOH . 
M 7 HOH AAA 125 725 424 HOH HOH . 
M 7 HOH AAA 126 726 490 HOH HOH . 
M 7 HOH AAA 127 727 224 HOH HOH . 
M 7 HOH AAA 128 728 6 HOH HOH . 
M 7 HOH AAA 129 729 446 HOH HOH . 
M 7 HOH AAA 130 730 3 HOH HOH . 
M 7 HOH AAA 131 731 256 HOH HOH . 
M 7 HOH AAA 132 732 206 HOH HOH . 
M 7 HOH AAA 133 733 485 HOH HOH . 
M 7 HOH AAA 134 734 115 HOH HOH . 
M 7 HOH AAA 135 735 366 HOH HOH . 
M 7 HOH AAA 136 736 518 HOH HOH . 
M 7 HOH AAA 137 737 390 HOH HOH . 
M 7 HOH AAA 138 738 480 HOH HOH . 
M 7 HOH AAA 139 739 403 HOH HOH . 
M 7 HOH AAA 140 740 402 HOH HOH . 
M 7 HOH AAA 141 741 101 HOH HOH . 
M 7 HOH AAA 142 742 405 HOH HOH . 
M 7 HOH AAA 143 743 105 HOH HOH . 
M 7 HOH AAA 144 744 212 HOH HOH . 
M 7 HOH AAA 145 745 382 HOH HOH . 
M 7 HOH AAA 146 746 202 HOH HOH . 
M 7 HOH AAA 147 747 85 HOH HOH . 
M 7 HOH AAA 148 748 428 HOH HOH . 
M 7 HOH AAA 149 749 26 HOH HOH . 
M 7 HOH AAA 150 750 112 HOH HOH . 
M 7 HOH AAA 151 751 125 HOH HOH . 
M 7 HOH AAA 152 752 391 HOH HOH . 
M 7 HOH AAA 153 753 46 HOH HOH . 
M 7 HOH AAA 154 754 505 HOH HOH . 
M 7 HOH AAA 155 755 521 HOH HOH . 
M 7 HOH AAA 156 756 351 HOH HOH . 
M 7 HOH AAA 157 757 208 HOH HOH . 
M 7 HOH AAA 158 758 109 HOH HOH . 
M 7 HOH AAA 159 759 516 HOH HOH . 
M 7 HOH AAA 160 760 431 HOH HOH . 
M 7 HOH AAA 161 761 456 HOH HOH . 
M 7 HOH AAA 162 762 10 HOH HOH . 
M 7 HOH AAA 163 763 510 HOH HOH . 
M 7 HOH AAA 164 764 28 HOH HOH . 
M 7 HOH AAA 165 765 495 HOH HOH . 
M 7 HOH AAA 166 766 375 HOH HOH . 
M 7 HOH AAA 167 767 494 HOH HOH . 
M 7 HOH AAA 168 768 42 HOH HOH . 
M 7 HOH AAA 169 769 350 HOH HOH . 
M 7 HOH AAA 170 770 140 HOH HOH . 
M 7 HOH AAA 171 771 512 HOH HOH . 
M 7 HOH AAA 172 772 481 HOH HOH . 
M 7 HOH AAA 173 773 370 HOH HOH . 
M 7 HOH AAA 174 774 250 HOH HOH . 
M 7 HOH AAA 175 775 425 HOH HOH . 
M 7 HOH AAA 176 776 358 HOH HOH . 
M 7 HOH AAA 177 777 352 HOH HOH . 
M 7 HOH AAA 178 778 439 HOH HOH . 
M 7 HOH AAA 179 779 517 HOH HOH . 
M 7 HOH AAA 180 780 410 HOH HOH . 
M 7 HOH AAA 181 781 394 HOH HOH . 
M 7 HOH AAA 182 782 470 HOH HOH . 
M 7 HOH AAA 183 783 162 HOH HOH . 
M 7 HOH AAA 184 784 430 HOH HOH . 
M 7 HOH AAA 185 785 429 HOH HOH . 
M 7 HOH AAA 186 786 466 HOH HOH . 
M 7 HOH AAA 187 787 93 HOH HOH . 
M 7 HOH AAA 188 788 452 HOH HOH . 
M 7 HOH AAA 189 789 378 HOH HOH . 
M 7 HOH AAA 190 790 478 HOH HOH . 
M 7 HOH AAA 191 791 371 HOH HOH . 
M 7 HOH AAA 192 792 455 HOH HOH . 
M 7 HOH AAA 193 793 341 HOH HOH . 
M 7 HOH AAA 194 794 400 HOH HOH . 
M 7 HOH AAA 195 795 492 HOH HOH . 
M 7 HOH AAA 196 796 447 HOH HOH . 
M 7 HOH AAA 197 797 395 HOH HOH . 
M 7 HOH AAA 198 798 414 HOH HOH . 
M 7 HOH AAA 199 799 491 HOH HOH . 
M 7 HOH AAA 200 800 434 HOH HOH . 
M 7 HOH AAA 201 801 145 HOH HOH . 
M 7 HOH AAA 202 802 347 HOH HOH . 
M 7 HOH AAA 203 803 433 HOH HOH . 
M 7 HOH AAA 204 804 89 HOH HOH . 
M 7 HOH AAA 205 805 343 HOH HOH . 
M 7 HOH AAA 206 806 194 HOH HOH . 
M 7 HOH AAA 207 807 196 HOH HOH . 
M 7 HOH AAA 208 808 379 HOH HOH . 
M 7 HOH AAA 209 809 487 HOH HOH . 
M 7 HOH AAA 210 810 515 HOH HOH . 
M 7 HOH AAA 211 811 459 HOH HOH . 
M 7 HOH AAA 212 812 373 HOH HOH . 
M 7 HOH AAA 213 813 476 HOH HOH . 
M 7 HOH AAA 214 814 519 HOH HOH . 
M 7 HOH AAA 215 815 349 HOH HOH . 
M 7 HOH AAA 216 816 418 HOH HOH . 
M 7 HOH AAA 217 817 511 HOH HOH . 
M 7 HOH AAA 218 818 483 HOH HOH . 
M 7 HOH AAA 219 819 368 HOH HOH . 
M 7 HOH AAA 220 820 486 HOH HOH . 
M 7 HOH AAA 221 821 468 HOH HOH . 
M 7 HOH AAA 222 822 493 HOH HOH . 
M 7 HOH AAA 223 823 509 HOH HOH . 
M 7 HOH AAA 224 824 522 HOH HOH . 
M 7 HOH AAA 225 825 355 HOH HOH . 
M 7 HOH AAA 226 826 460 HOH HOH . 
M 7 HOH AAA 227 827 348 HOH HOH . 
M 7 HOH AAA 228 828 506 HOH HOH . 
M 7 HOH AAA 229 829 507 HOH HOH . 
M 7 HOH AAA 230 830 454 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 4 15.971 -1.643 53.521 1 96.76 ? S DMS 503 AAA 1 
HETATM 2 O O DMS . . . D 4 15.719 -0.424 52.679 1 91.47 ? O DMS 503 AAA 1 
HETATM 3 C C1 DMS . . . D 4 14.681 -1.669 54.743 1 94.55 ? C1 DMS 503 AAA 1 
HETATM 4 C C2 DMS . . . D 4 15.434 -3.034 52.554 1 91.81 ? C2 DMS 503 AAA 1 
#
_model_server_stats.io_time_ms              33 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           1154 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           4 
#