data_6X76
#
_model_server_result.job_id            8n4jHMUhD451mxbUlKIEeA 
_model_server_result.datetime_utc      '2024-11-30 00:28:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6x76 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":101}' 
#
_entry.id    6X76 
#
_exptl.entry_id    6X76 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6X76 
_cell.length_a            61.965 
_cell.length_b            73.626 
_cell.length_c            117.634 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6X76 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OP2 DC 13 P DC 13 1_555 D MN MN . P MN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.731 ? 
metalc ? metalc2 A O5' DC 13 P DC 13 1_555 E MN MN . P MN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
metalc ? metalc3 D MN MN . P MN 101 1_555 C OD2 ASP 58 A ASP 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? 
metalc ? metalc4 D MN MN . P MN 101 1_555 C OD1 ASP 163 A ASP 467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc5 D MN MN . P MN 101 1_555 C OE2 GLU 164 A GLU 468 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? 
metalc ? metalc6 D MN MN . P MN 101 1_555 H O1A DCP . A DCP 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc7 E MN MN . P MN 102 1_555 H O2A DCP . A DCP 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? 
metalc ? metalc8 C OD1 ASP 58 A ASP 362 1_555 F MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? 
metalc ? metalc9 C O PHE 59 A PHE 363 1_555 F MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? 
metalc ? metalc10 C OD2 ASP 163 A ASP 467 1_555 F MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? 
metalc ? metalc11 C O ASP 244 A ASP 548 1_555 G MN MN . A MN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc12 C O VAL 249 A VAL 553 1_555 G MN MN . A MN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc13 F MN MN . A MN 801 1_555 H O1A DCP . A DCP 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc14 F MN MN . A MN 801 1_555 H O2B DCP . A DCP 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc15 F MN MN . A MN 801 1_555 H O3G DCP . A DCP 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? 
hydrog WATSON-CRICK hydrog1 A N1 DG 1 P DG 1 1_555 B N3 DC 17 T DC 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N2 DG 1 P DG 1 1_555 B O2 DC 17 T DC 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A O6 DG 1 P DG 1 1_555 B N4 DC 17 T DC 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N1 DG 2 P DG 2 1_555 B N3 DC 16 T DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A N2 DG 2 P DG 2 1_555 B O2 DC 16 T DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A O6 DG 2 P DG 2 1_555 B N4 DC 16 T DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A N1 DG 3 P DG 3 1_555 B N3 DC 15 T DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A N2 DG 3 P DG 3 1_555 B O2 DC 15 T DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A O6 DG 3 P DG 3 1_555 B N4 DC 15 T DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A N1 DG 4 P DG 4 1_555 B N3 DC 14 T DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A N2 DG 4 P DG 4 1_555 B O2 DC 14 T DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A O6 DG 4 P DG 4 1_555 B N4 DC 14 T DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N3 DT 5 P DT 5 1_555 B N1 DA 13 T DA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A O4 DT 5 P DT 5 1_555 B N6 DA 13 T DA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 A N1 DG 6 P DG 6 1_555 B N3 DC 12 T DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 A N2 DG 6 P DG 6 1_555 B O2 DC 12 T DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 A O6 DG 6 P DG 6 1_555 B N4 DC 12 T DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 A N3 DT 7 P DT 7 1_555 B N1 DA 11 T DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 A O4 DT 7 P DT 7 1_555 B N6 DA 11 T DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 A N1 DG 8 P DG 8 1_555 B N3 DC 10 T DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog21 A N2 DG 8 P DG 8 1_555 B O2 DC 10 T DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog22 A O6 DG 8 P DG 8 1_555 B N4 DC 10 T DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog23 A N1 DG 9 P DG 9 1_555 B N3 DC 9 T DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog24 A N2 DG 9 P DG 9 1_555 B O2 DC 9 T DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog25 A O6 DG 9 P DG 9 1_555 B N4 DC 9 T DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog26 A N3 DT 10 P DT 10 1_555 B N1 DA 8 T DA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog27 A O4 DT 10 P DT 10 1_555 B N6 DA 8 T DA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog28 A N1 DA 11 P DA 11 1_555 B N3 DT 7 T DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog29 A N6 DA 11 P DA 11 1_555 B O4 DT 7 T DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog30 A N1 DG 12 P DG 12 1_555 B N3 DC 6 T DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog31 A N2 DG 12 P DG 12 1_555 B O2 DC 6 T DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog32 A O6 DG 12 P DG 12 1_555 B N4 DC 6 T DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6X76 
_atom_sites.fract_transf_matrix[1][1]    0.016138 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013582 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008501 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 MN P 1 101 2 MN MN . 
E 4 MN P 1 102 4 MN MN . 
F 4 MN A 1 801 1 MN MN . 
G 4 MN A 1 802 3 MN MN . 
H 5 DCP A 1 803 804 DCP DCP . 
I 6 HOH P 1 201 24 HOH HOH . 
I 6 HOH P 2 202 6 HOH HOH . 
I 6 HOH P 3 203 30 HOH HOH . 
I 6 HOH P 4 204 77 HOH HOH . 
I 6 HOH P 5 205 14 HOH HOH . 
I 6 HOH P 6 206 19 HOH HOH . 
I 6 HOH P 7 207 46 HOH HOH . 
I 6 HOH P 8 208 12 HOH HOH . 
I 6 HOH P 9 209 86 HOH HOH . 
I 6 HOH P 10 210 40 HOH HOH . 
I 6 HOH P 11 211 65 HOH HOH . 
J 6 HOH T 1 101 2 HOH HOH . 
J 6 HOH T 2 102 23 HOH HOH . 
J 6 HOH T 3 103 73 HOH HOH . 
J 6 HOH T 4 104 42 HOH HOH . 
J 6 HOH T 5 105 56 HOH HOH . 
J 6 HOH T 6 106 82 HOH HOH . 
K 6 HOH A 1 901 45 HOH HOH . 
K 6 HOH A 2 902 76 HOH HOH . 
K 6 HOH A 3 903 64 HOH HOH . 
K 6 HOH A 4 904 54 HOH HOH . 
K 6 HOH A 5 905 37 HOH HOH . 
K 6 HOH A 6 906 71 HOH HOH . 
K 6 HOH A 7 907 10 HOH HOH . 
K 6 HOH A 8 908 26 HOH HOH . 
K 6 HOH A 9 909 17 HOH HOH . 
K 6 HOH A 10 910 22 HOH HOH . 
K 6 HOH A 11 911 3 HOH HOH . 
K 6 HOH A 12 912 28 HOH HOH . 
K 6 HOH A 13 913 4 HOH HOH . 
K 6 HOH A 14 914 52 HOH HOH . 
K 6 HOH A 15 915 60 HOH HOH . 
K 6 HOH A 16 916 78 HOH HOH . 
K 6 HOH A 17 917 20 HOH HOH . 
K 6 HOH A 18 918 5 HOH HOH . 
K 6 HOH A 19 919 13 HOH HOH . 
K 6 HOH A 20 920 8 HOH HOH . 
K 6 HOH A 21 921 41 HOH HOH . 
K 6 HOH A 22 922 43 HOH HOH . 
K 6 HOH A 23 923 7 HOH HOH . 
K 6 HOH A 24 924 21 HOH HOH . 
K 6 HOH A 25 925 49 HOH HOH . 
K 6 HOH A 26 926 9 HOH HOH . 
K 6 HOH A 27 927 11 HOH HOH . 
K 6 HOH A 28 928 35 HOH HOH . 
K 6 HOH A 29 929 58 HOH HOH . 
K 6 HOH A 30 930 81 HOH HOH . 
K 6 HOH A 31 931 27 HOH HOH . 
K 6 HOH A 32 932 55 HOH HOH . 
K 6 HOH A 33 933 85 HOH HOH . 
K 6 HOH A 34 934 15 HOH HOH . 
K 6 HOH A 35 935 80 HOH HOH . 
K 6 HOH A 36 936 32 HOH HOH . 
K 6 HOH A 37 937 18 HOH HOH . 
K 6 HOH A 38 938 16 HOH HOH . 
K 6 HOH A 39 939 48 HOH HOH . 
K 6 HOH A 40 940 29 HOH HOH . 
K 6 HOH A 41 941 31 HOH HOH . 
K 6 HOH A 42 942 36 HOH HOH . 
K 6 HOH A 43 943 72 HOH HOH . 
K 6 HOH A 44 944 38 HOH HOH . 
K 6 HOH A 45 945 25 HOH HOH . 
K 6 HOH A 46 946 34 HOH HOH . 
K 6 HOH A 47 947 69 HOH HOH . 
K 6 HOH A 48 948 59 HOH HOH . 
K 6 HOH A 49 949 61 HOH HOH . 
K 6 HOH A 50 950 53 HOH HOH . 
K 6 HOH A 51 951 62 HOH HOH . 
K 6 HOH A 52 952 63 HOH HOH . 
K 6 HOH A 53 953 39 HOH HOH . 
K 6 HOH A 54 954 57 HOH HOH . 
K 6 HOH A 55 955 74 HOH HOH . 
K 6 HOH A 56 956 68 HOH HOH . 
K 6 HOH A 57 957 75 HOH HOH . 
K 6 HOH A 58 958 70 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -7.681 
_atom_site.Cartn_y               -1.129 
_atom_site.Cartn_z               6.137 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35.84 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           101 
_atom_site.auth_asym_id          P 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           225 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           1 
#