data_6X7C # _model_server_result.job_id LvAjMBWQlDLKPlqEcFPi5A _model_server_result.datetime_utc '2024-10-19 03:41:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6x7c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6X7C # _exptl.entry_id 6X7C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 505.542 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-[5-(morpholin-4-yl)-7-oxo-7H-thieno[3,2-b]pyran-3-yl]-N-[(pyridin-3-yl)methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 62.87 _cell.angle_beta 83.59 _cell.angle_gamma 85.49 _cell.entry_id 6X7C _cell.length_a 30.547 _cell.length_b 34.65 _cell.length_c 36.033 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6X7C _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H23 N3 O6 S' _chem_comp.formula_weight 505.542 _chem_comp.id KV9 _chem_comp.mon_nstd_flag . _chem_comp.name 7-[5-(morpholin-4-yl)-7-oxo-7H-thieno[3,2-b]pyran-3-yl]-N-[(pyridin-3-yl)methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C20 KV9 doub 173 n y C19 C18 KV9 sing 174 n y C20 N15 KV9 sing 175 n y C18 C17 KV9 doub 176 n y N15 C16 KV9 doub 177 n y C17 C16 KV9 sing 178 n y C17 C14 KV9 sing 179 n n C14 N13 KV9 sing 180 n n N13 C11 KV9 sing 181 n n O12 C11 KV9 doub 182 n n C11 C07 KV9 sing 183 n n O02 C03 KV9 sing 184 n n O02 C06 KV9 sing 185 n n C03 C04 KV9 sing 186 n n C31 O32 KV9 sing 187 n n C31 C30 KV9 sing 188 n n O32 C33 KV9 sing 189 n n C07 C06 KV9 doub 190 n y C07 C08 KV9 sing 191 n y C06 C05 KV9 sing 192 n y C04 O01 KV9 sing 193 n n C30 N35 KV9 sing 194 n n C33 C34 KV9 sing 195 n n C08 C09 KV9 doub 196 n y C05 O01 KV9 sing 197 n n C05 C10 KV9 doub 198 n y N35 C34 KV9 sing 199 n n N35 C24 KV9 sing 200 n n C09 C10 KV9 sing 201 n y C09 C28 KV9 sing 202 n n O21 C24 KV9 sing 203 n n O21 C27 KV9 sing 204 n n C24 C23 KV9 doub 205 n n C28 C27 KV9 sing 206 n y C28 C29 KV9 doub 207 n y C27 C26 KV9 doub 208 n y C23 C22 KV9 sing 209 n n C29 S25 KV9 sing 210 n y C26 C22 KV9 sing 211 n n C26 S25 KV9 sing 212 n y C22 O36 KV9 doub 213 n n C03 H1 KV9 sing 214 n n C03 H2 KV9 sing 215 n n C04 H3 KV9 sing 216 n n C04 H4 KV9 sing 217 n n C08 H5 KV9 sing 218 n n C10 H6 KV9 sing 219 n n N13 H7 KV9 sing 220 n n C14 H8 KV9 sing 221 n n C14 H9 KV9 sing 222 n n C16 H10 KV9 sing 223 n n C18 H11 KV9 sing 224 n n C19 H12 KV9 sing 225 n n C20 H13 KV9 sing 226 n n C23 H14 KV9 sing 227 n n C29 H15 KV9 sing 228 n n C30 H16 KV9 sing 229 n n C30 H17 KV9 sing 230 n n C31 H18 KV9 sing 231 n n C31 H19 KV9 sing 232 n n C33 H20 KV9 sing 233 n n C33 H21 KV9 sing 234 n n C34 H22 KV9 sing 235 n n C34 H23 KV9 sing 236 n n # _atom_sites.entry_id 6X7C _atom_sites.fract_transf_matrix[1][1] 0.032736 _atom_sites.fract_transf_matrix[1][2] -0.002583 _atom_sites.fract_transf_matrix[1][3] -0.002814 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02895 _atom_sites.fract_transf_matrix[2][3] -0.014643 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031296 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KV9 A 1 201 1 KV9 kv9 . C 3 HOH A 1 301 6 HOH HOH . C 3 HOH A 2 302 60 HOH HOH . C 3 HOH A 3 303 19 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 25 HOH HOH . C 3 HOH A 6 306 8 HOH HOH . C 3 HOH A 7 307 2 HOH HOH . C 3 HOH A 8 308 21 HOH HOH . C 3 HOH A 9 309 30 HOH HOH . C 3 HOH A 10 310 14 HOH HOH . C 3 HOH A 11 311 42 HOH HOH . C 3 HOH A 12 312 57 HOH HOH . C 3 HOH A 13 313 24 HOH HOH . C 3 HOH A 14 314 17 HOH HOH . C 3 HOH A 15 315 69 HOH HOH . C 3 HOH A 16 316 66 HOH HOH . C 3 HOH A 17 317 1 HOH HOH . C 3 HOH A 18 318 34 HOH HOH . C 3 HOH A 19 319 5 HOH HOH . C 3 HOH A 20 320 15 HOH HOH . C 3 HOH A 21 321 81 HOH HOH . C 3 HOH A 22 322 3 HOH HOH . C 3 HOH A 23 323 20 HOH HOH . C 3 HOH A 24 324 13 HOH HOH . C 3 HOH A 25 325 29 HOH HOH . C 3 HOH A 26 326 16 HOH HOH . C 3 HOH A 27 327 22 HOH HOH . C 3 HOH A 28 328 32 HOH HOH . C 3 HOH A 29 329 44 HOH HOH . C 3 HOH A 30 330 18 HOH HOH . C 3 HOH A 31 331 12 HOH HOH . C 3 HOH A 32 332 9 HOH HOH . C 3 HOH A 33 333 31 HOH HOH . C 3 HOH A 34 334 83 HOH HOH . C 3 HOH A 35 335 40 HOH HOH . C 3 HOH A 36 336 80 HOH HOH . C 3 HOH A 37 337 28 HOH HOH . C 3 HOH A 38 338 23 HOH HOH . C 3 HOH A 39 339 46 HOH HOH . C 3 HOH A 40 340 84 HOH HOH . C 3 HOH A 41 341 49 HOH HOH . C 3 HOH A 42 342 33 HOH HOH . C 3 HOH A 43 343 11 HOH HOH . C 3 HOH A 44 344 54 HOH HOH . C 3 HOH A 45 345 51 HOH HOH . C 3 HOH A 46 346 41 HOH HOH . C 3 HOH A 47 347 71 HOH HOH . C 3 HOH A 48 348 35 HOH HOH . C 3 HOH A 49 349 50 HOH HOH . C 3 HOH A 50 350 73 HOH HOH . C 3 HOH A 51 351 38 HOH HOH . C 3 HOH A 52 352 59 HOH HOH . C 3 HOH A 53 353 74 HOH HOH . C 3 HOH A 54 354 61 HOH HOH . C 3 HOH A 55 355 26 HOH HOH . C 3 HOH A 56 356 36 HOH HOH . C 3 HOH A 57 357 27 HOH HOH . C 3 HOH A 58 358 79 HOH HOH . C 3 HOH A 59 359 65 HOH HOH . C 3 HOH A 60 360 45 HOH HOH . C 3 HOH A 61 361 62 HOH HOH . C 3 HOH A 62 362 64 HOH HOH . C 3 HOH A 63 363 47 HOH HOH . C 3 HOH A 64 364 10 HOH HOH . C 3 HOH A 65 365 63 HOH HOH . C 3 HOH A 66 366 78 HOH HOH . C 3 HOH A 67 367 82 HOH HOH . C 3 HOH A 68 368 68 HOH HOH . C 3 HOH A 69 369 67 HOH HOH . C 3 HOH A 70 370 56 HOH HOH . C 3 HOH A 71 371 52 HOH HOH . C 3 HOH A 72 372 48 HOH HOH . C 3 HOH A 73 373 37 HOH HOH . C 3 HOH A 74 374 85 HOH HOH . C 3 HOH A 75 375 43 HOH HOH . C 3 HOH A 76 376 76 HOH HOH . C 3 HOH A 77 377 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 KV9 . . . B 2 -14.979 -2.589 25.182 1 23.02 ? O01 KV9 201 A 1 HETATM 2 O O02 KV9 . . . B 2 -16.337 -3.145 22.676 1 27.67 ? O02 KV9 201 A 1 HETATM 3 C C03 KV9 . . . B 2 -15.192 -2.377 22.702 1 25.9 ? C03 KV9 201 A 1 HETATM 4 C C04 KV9 . . . B 2 -14.419 -2.242 23.968 1 24.58 ? C04 KV9 201 A 1 HETATM 5 C C05 KV9 . . . B 2 -16.399 -2.827 25.149 1 24.29 ? C05 KV9 201 A 1 HETATM 6 C C06 KV9 . . . B 2 -17.068 -3.103 23.918 1 26.53 ? C06 KV9 201 A 1 HETATM 7 C C07 KV9 . . . B 2 -18.459 -3.336 23.909 1 24.45 ? C07 KV9 201 A 1 HETATM 8 C C08 KV9 . . . B 2 -19.185 -3.3 25.112 1 23.28 ? C08 KV9 201 A 1 HETATM 9 C C09 KV9 . . . B 2 -18.524 -3.016 26.351 1 23.88 ? C09 KV9 201 A 1 HETATM 10 C C10 KV9 . . . B 2 -17.137 -2.784 26.356 1 23.35 ? C10 KV9 201 A 1 HETATM 11 C C11 KV9 . . . B 2 -19.167 -3.635 22.582 1 27.15 ? C11 KV9 201 A 1 HETATM 12 O O12 KV9 . . . B 2 -20.308 -3.345 22.434 1 29.07 ? O12 KV9 201 A 1 HETATM 13 N N13 KV9 . . . B 2 -18.434 -4.285 21.503 1 28.04 ? N13 KV9 201 A 1 HETATM 14 C C14 KV9 . . . B 2 -19.095 -4.579 20.235 1 28.4 ? C14 KV9 201 A 1 HETATM 15 N N15 KV9 . . . B 2 -18.547 -1.108 18.912 1 30.58 ? N15 KV9 201 A 1 HETATM 16 C C16 KV9 . . . B 2 -18.451 -2.197 19.655 1 29.52 ? C16 KV9 201 A 1 HETATM 17 C C17 KV9 . . . B 2 -19.21 -3.321 19.37 1 29.09 ? C17 KV9 201 A 1 HETATM 18 C C18 KV9 . . . B 2 -20.078 -3.304 18.287 1 30.24 ? C18 KV9 201 A 1 HETATM 19 C C19 KV9 . . . B 2 -20.141 -2.136 17.539 1 32.17 ? C19 KV9 201 A 1 HETATM 20 C C20 KV9 . . . B 2 -19.359 -1.041 17.873 1 31.54 ? C20 KV9 201 A 1 HETATM 21 O O21 KV9 . . . B 2 -21.602 -2.429 26.517 1 22.15 ? O21 KV9 201 A 1 HETATM 22 C C22 KV9 . . . B 2 -22.71 -2.482 29.276 1 21 ? C22 KV9 201 A 1 HETATM 23 C C23 KV9 . . . B 2 -23.575 -2.19 28.169 1 21.58 ? C23 KV9 201 A 1 HETATM 24 C C24 KV9 . . . B 2 -23.011 -2.116 26.775 1 22.81 ? C24 KV9 201 A 1 HETATM 25 S S25 KV9 . . . B 2 -20.002 -3.089 30.087 1 20.83 ? S25 KV9 201 A 1 HETATM 26 C C26 KV9 . . . B 2 -21.291 -2.734 29.038 1 21.97 ? C26 KV9 201 A 1 HETATM 27 C C27 KV9 . . . B 2 -20.748 -2.713 27.721 1 22.15 ? C27 KV9 201 A 1 HETATM 28 C C28 KV9 . . . B 2 -19.324 -2.982 27.661 1 22.73 ? C28 KV9 201 A 1 HETATM 29 C C29 KV9 . . . B 2 -18.746 -3.219 28.927 1 22.29 ? C29 KV9 201 A 1 HETATM 30 C C30 KV9 . . . B 2 -23.332 -2.038 24.248 1 24.6 ? C30 KV9 201 A 1 HETATM 31 C C31 KV9 . . . B 2 -24.055 -2.931 23.244 1 26.4 ? C31 KV9 201 A 1 HETATM 32 O O32 KV9 . . . B 2 -25.146 -3.579 23.799 1 27.57 ? O32 KV9 201 A 1 HETATM 33 C C33 KV9 . . . B 2 -25.995 -2.684 24.427 1 24.07 ? C33 KV9 201 A 1 HETATM 34 C C34 KV9 . . . B 2 -25.343 -2.07 25.662 1 22.64 ? C34 KV9 201 A 1 HETATM 35 N N35 KV9 . . . B 2 -23.878 -2.083 25.611 1 24.78 ? N35 KV9 201 A 1 HETATM 36 O O36 KV9 . . . B 2 -23.14 -2.522 30.382 1 19.65 ? O36 KV9 201 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 36 #