data_6XAF
#
_model_server_result.job_id            6OJasM10oatGaEZSCiMBfQ 
_model_server_result.datetime_utc      '2024-11-16 10:40:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xaf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1601}' 
#
_entry.id    6XAF 
#
_exptl.entry_id    6XAF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.38 
_cell.angle_gamma         90 
_cell.entry_id            6XAF 
_cell.length_a            44.497 
_cell.length_b            101.785 
_cell.length_c            44.527 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6XAF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 34 A THR 1348 1_555 C MG MG . A MG 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
metalc ? metalc2 C MG MG . A MG 1601 1_555 D O3B GDP . A GDP 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
metalc ? metalc3 C MG MG . A MG 1601 1_555 G O HOH . A HOH 1713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc4 C MG MG . A MG 1601 1_555 G O HOH . A HOH 1720 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc5 C MG MG . A MG 1601 1_555 G O HOH . A HOH 1741 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc6 C MG MG . A MG 1601 1_555 H O HOH . B HOH 1707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc7 G O HOH . A HOH 1704 1_555 E MG MG . B MG 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc8 B OG1 THR 34 B THR 1348 1_555 E MG MG . B MG 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc9 E MG MG . B MG 1601 1_555 F O1B GDP . B GDP 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
metalc ? metalc10 E MG MG . B MG 1601 1_555 H O HOH . B HOH 1721 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc11 E MG MG . B MG 1601 1_555 H O HOH . B HOH 1725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc12 E MG MG . B MG 1601 1_555 H O HOH . B HOH 1745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6XAF 
_atom_sites.fract_transf_matrix[1][1]    0.022473 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004523 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009825 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022909 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 1601 2 MG MG . 
D 3 GDP A 1 1602 2 GDP GDP . 
E 2 MG B 1 1601 1 MG MG . 
F 3 GDP B 1 1602 1 GDP GDP . 
G 4 HOH A 1 1701 48 HOH HOH . 
G 4 HOH A 2 1702 15 HOH HOH . 
G 4 HOH A 3 1703 17 HOH HOH . 
G 4 HOH A 4 1704 10 HOH HOH . 
G 4 HOH A 5 1705 50 HOH HOH . 
G 4 HOH A 6 1706 11 HOH HOH . 
G 4 HOH A 7 1707 95 HOH HOH . 
G 4 HOH A 8 1708 44 HOH HOH . 
G 4 HOH A 9 1709 80 HOH HOH . 
G 4 HOH A 10 1710 25 HOH HOH . 
G 4 HOH A 11 1711 60 HOH HOH . 
G 4 HOH A 12 1712 86 HOH HOH . 
G 4 HOH A 13 1713 98 HOH HOH . 
G 4 HOH A 14 1714 70 HOH HOH . 
G 4 HOH A 15 1715 1 HOH HOH . 
G 4 HOH A 16 1716 118 HOH HOH . 
G 4 HOH A 17 1717 35 HOH HOH . 
G 4 HOH A 18 1718 107 HOH HOH . 
G 4 HOH A 19 1719 42 HOH HOH . 
G 4 HOH A 20 1720 117 HOH HOH . 
G 4 HOH A 21 1721 4 HOH HOH . 
G 4 HOH A 22 1722 127 HOH HOH . 
G 4 HOH A 23 1723 51 HOH HOH . 
G 4 HOH A 24 1724 14 HOH HOH . 
G 4 HOH A 25 1725 66 HOH HOH . 
G 4 HOH A 26 1726 88 HOH HOH . 
G 4 HOH A 27 1727 28 HOH HOH . 
G 4 HOH A 28 1728 23 HOH HOH . 
G 4 HOH A 29 1729 46 HOH HOH . 
G 4 HOH A 30 1730 120 HOH HOH . 
G 4 HOH A 31 1731 129 HOH HOH . 
G 4 HOH A 32 1732 22 HOH HOH . 
G 4 HOH A 33 1733 56 HOH HOH . 
G 4 HOH A 34 1734 113 HOH HOH . 
G 4 HOH A 35 1735 100 HOH HOH . 
G 4 HOH A 36 1736 103 HOH HOH . 
G 4 HOH A 37 1737 68 HOH HOH . 
G 4 HOH A 38 1738 31 HOH HOH . 
G 4 HOH A 39 1739 53 HOH HOH . 
G 4 HOH A 40 1740 112 HOH HOH . 
G 4 HOH A 41 1741 76 HOH HOH . 
G 4 HOH A 42 1742 83 HOH HOH . 
G 4 HOH A 43 1743 21 HOH HOH . 
G 4 HOH A 44 1744 73 HOH HOH . 
G 4 HOH A 45 1745 61 HOH HOH . 
G 4 HOH A 46 1746 116 HOH HOH . 
G 4 HOH A 47 1747 125 HOH HOH . 
G 4 HOH A 48 1748 67 HOH HOH . 
G 4 HOH A 49 1749 123 HOH HOH . 
G 4 HOH A 50 1750 119 HOH HOH . 
G 4 HOH A 51 1751 65 HOH HOH . 
G 4 HOH A 52 1752 49 HOH HOH . 
G 4 HOH A 53 1753 97 HOH HOH . 
G 4 HOH A 54 1754 57 HOH HOH . 
G 4 HOH A 55 1755 38 HOH HOH . 
G 4 HOH A 56 1756 64 HOH HOH . 
G 4 HOH A 57 1757 91 HOH HOH . 
G 4 HOH A 58 1758 110 HOH HOH . 
G 4 HOH A 59 1759 74 HOH HOH . 
G 4 HOH A 60 1760 75 HOH HOH . 
G 4 HOH A 61 1761 90 HOH HOH . 
G 4 HOH A 62 1762 45 HOH HOH . 
G 4 HOH A 63 1763 109 HOH HOH . 
G 4 HOH A 64 1764 63 HOH HOH . 
G 4 HOH A 65 1765 69 HOH HOH . 
G 4 HOH A 66 1766 77 HOH HOH . 
H 4 HOH B 1 1701 43 HOH HOH . 
H 4 HOH B 2 1702 128 HOH HOH . 
H 4 HOH B 3 1703 71 HOH HOH . 
H 4 HOH B 4 1704 26 HOH HOH . 
H 4 HOH B 5 1705 18 HOH HOH . 
H 4 HOH B 6 1706 89 HOH HOH . 
H 4 HOH B 7 1707 2 HOH HOH . 
H 4 HOH B 8 1708 37 HOH HOH . 
H 4 HOH B 9 1709 5 HOH HOH . 
H 4 HOH B 10 1710 32 HOH HOH . 
H 4 HOH B 11 1711 3 HOH HOH . 
H 4 HOH B 12 1712 106 HOH HOH . 
H 4 HOH B 13 1713 105 HOH HOH . 
H 4 HOH B 14 1714 16 HOH HOH . 
H 4 HOH B 15 1715 84 HOH HOH . 
H 4 HOH B 16 1716 13 HOH HOH . 
H 4 HOH B 17 1717 19 HOH HOH . 
H 4 HOH B 18 1718 54 HOH HOH . 
H 4 HOH B 19 1719 8 HOH HOH . 
H 4 HOH B 20 1720 124 HOH HOH . 
H 4 HOH B 21 1721 7 HOH HOH . 
H 4 HOH B 22 1722 24 HOH HOH . 
H 4 HOH B 23 1723 9 HOH HOH . 
H 4 HOH B 24 1724 101 HOH HOH . 
H 4 HOH B 25 1725 134 HOH HOH . 
H 4 HOH B 26 1726 39 HOH HOH . 
H 4 HOH B 27 1727 27 HOH HOH . 
H 4 HOH B 28 1728 36 HOH HOH . 
H 4 HOH B 29 1729 94 HOH HOH . 
H 4 HOH B 30 1730 126 HOH HOH . 
H 4 HOH B 31 1731 55 HOH HOH . 
H 4 HOH B 32 1732 104 HOH HOH . 
H 4 HOH B 33 1733 12 HOH HOH . 
H 4 HOH B 34 1734 30 HOH HOH . 
H 4 HOH B 35 1735 108 HOH HOH . 
H 4 HOH B 36 1736 6 HOH HOH . 
H 4 HOH B 37 1737 29 HOH HOH . 
H 4 HOH B 38 1738 47 HOH HOH . 
H 4 HOH B 39 1739 20 HOH HOH . 
H 4 HOH B 40 1740 72 HOH HOH . 
H 4 HOH B 41 1741 111 HOH HOH . 
H 4 HOH B 42 1742 40 HOH HOH . 
H 4 HOH B 43 1743 34 HOH HOH . 
H 4 HOH B 44 1744 59 HOH HOH . 
H 4 HOH B 45 1745 99 HOH HOH . 
H 4 HOH B 46 1746 102 HOH HOH . 
H 4 HOH B 47 1747 79 HOH HOH . 
H 4 HOH B 48 1748 93 HOH HOH . 
H 4 HOH B 49 1749 133 HOH HOH . 
H 4 HOH B 50 1750 58 HOH HOH . 
H 4 HOH B 51 1751 122 HOH HOH . 
H 4 HOH B 52 1752 121 HOH HOH . 
H 4 HOH B 53 1753 33 HOH HOH . 
H 4 HOH B 54 1754 81 HOH HOH . 
H 4 HOH B 55 1755 132 HOH HOH . 
H 4 HOH B 56 1756 92 HOH HOH . 
H 4 HOH B 57 1757 52 HOH HOH . 
H 4 HOH B 58 1758 62 HOH HOH . 
H 4 HOH B 59 1759 82 HOH HOH . 
H 4 HOH B 60 1760 78 HOH HOH . 
H 4 HOH B 61 1761 130 HOH HOH . 
H 4 HOH B 62 1762 85 HOH HOH . 
H 4 HOH B 63 1763 114 HOH HOH . 
H 4 HOH B 64 1764 41 HOH HOH . 
H 4 HOH B 65 1765 96 HOH HOH . 
H 4 HOH B 66 1766 115 HOH HOH . 
H 4 HOH B 67 1767 131 HOH HOH . 
H 4 HOH B 68 1768 87 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               23.987 
_atom_site.Cartn_y               -4.615 
_atom_site.Cartn_z               8.58 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        28.34 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           1601 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#