data_6XBL
#
_model_server_result.job_id            EzAbyWHO5Xb6ElQ3ozXmRA 
_model_server_result.datetime_utc      '2024-11-23 04:01:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xbl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":701}' 
#
_entry.id    6XBL 
#
_exptl.entry_id    6XBL 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              490.059 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-chloro-N-[trans-4-(methylamino)cyclohexyl]-N-{[3-(pyridin-4-yl)phenyl]methyl}-1-benzothiophene-2-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6XBL 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6XBL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 64 R CYS 64 1_555 A SG CYS 178 R CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 A SG CYS 70 R CYS 70 1_555 A SG CYS 134 R CYS 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf3 A SG CYS 78 R CYS 78 1_555 A SG CYS 127 R CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 118 R CYS 118 1_555 A SG CYS 154 R CYS 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf5 A SG CYS 147 R CYS 147 1_555 A SG CYS 169 R CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf6 A SG CYS 193 R CYS 193 1_555 A SG CYS 213 R CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf7 A SG CYS 217 R CYS 217 1_555 A SG CYS 295 R CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf8 A SG CYS 314 R CYS 314 1_555 A SG CYS 390 R CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf9 A SG CYS 490 R CYS 490 1_555 A SG CYS 507 R CYS 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf10 C SG CYS 125 B CYS 121 1_555 C SG CYS 153 B CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf11 E SG CYS 22 S CYS 22 1_555 E SG CYS 96 S CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf12 E SG CYS 159 S CYS 147 1_555 E SG CYS 229 S CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C28 H28 Cl N3 O S' 
_chem_comp.formula_weight    490.059 
_chem_comp.id                V0S 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-chloro-N-[trans-4-(methylamino)cyclohexyl]-N-{[3-(pyridin-4-yl)phenyl]methyl}-1-benzothiophene-2-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 N11 V0S sing 433 n n 
N11 C10 V0S sing 434 n n 
C10 C13 V0S sing 435 n n 
C10 C09 V0S sing 436 n n 
C13 C14 V0S sing 437 n n 
C09 C08 V0S sing 438 n n 
C14 C07 V0S sing 439 n n 
C08 C07 V0S sing 440 n n 
C07 N06 V0S sing 441 n n 
N06 C15 V0S sing 442 n n 
N06 C05 V0S sing 443 n n 
O28 C15 V0S doub 444 n n 
C15 C16 V0S sing 445 n n 
C05 C04 V0S sing 446 n n 
C03 C04 V0S doub 447 n y 
C03 C38 V0S sing 448 n y 
C04 C29 V0S sing 449 n y 
C16 C17 V0S doub 450 n y 
C16 S27 V0S sing 451 n y 
C38 C37 V0S doub 452 n y 
CL18 C17 V0S sing 453 n n 
C17 C19 V0S sing 454 n y 
C29 C30 V0S doub 455 n y 
S27 C20 V0S sing 456 n y 
C37 C30 V0S sing 457 n y 
C30 C31 V0S sing 458 n n 
C19 C20 V0S doub 459 n y 
C19 C25 V0S sing 460 n y 
C20 C21 V0S sing 461 n y 
C31 C32 V0S doub 462 n y 
C31 C36 V0S sing 463 n y 
C25 C24 V0S doub 464 n y 
C21 C23 V0S doub 465 n y 
C32 C33 V0S sing 466 n y 
C36 C35 V0S doub 467 n y 
C24 C23 V0S sing 468 n y 
C33 N34 V0S doub 469 n y 
C35 N34 V0S sing 470 n y 
C10 H1 V0S sing 471 n n 
C14 H2 V0S sing 472 n n 
C14 H3 V0S sing 473 n n 
C13 H4 V0S sing 474 n n 
C13 H5 V0S sing 475 n n 
C12 H6 V0S sing 476 n n 
C12 H7 V0S sing 477 n n 
C12 H8 V0S sing 478 n n 
C21 H9 V0S sing 479 n n 
C24 H10 V0S sing 480 n n 
C03 H11 V0S sing 481 n n 
C05 H12 V0S sing 482 n n 
C05 H13 V0S sing 483 n n 
C07 H14 V0S sing 484 n n 
C08 H15 V0S sing 485 n n 
C08 H16 V0S sing 486 n n 
C09 H17 V0S sing 487 n n 
C09 H18 V0S sing 488 n n 
C23 H19 V0S sing 489 n n 
C25 H20 V0S sing 490 n n 
C29 H21 V0S sing 491 n n 
C32 H22 V0S sing 492 n n 
C33 H23 V0S sing 493 n n 
C35 H24 V0S sing 494 n n 
C36 H25 V0S sing 495 n n 
C37 H26 V0S sing 496 n n 
C38 H27 V0S sing 497 n n 
N11 H28 V0S sing 498 n n 
#
_atom_sites.entry_id                     6XBL 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 V0S R 1 701 1 V0S SAG . 
G 7 CLR R 1 702 1 CLR CLR . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 V0S . . . F 6 106.123 143.027 146.395 1 150.58 ? C10 V0S 701 R 1 
HETATM 2 C C14 V0S . . . F 6 105.408 144.412 148.331 1 151.12 ? C14 V0S 701 R 1 
HETATM 3 C C13 V0S . . . F 6 105.441 144.321 146.803 1 150.9 ? C13 V0S 701 R 1 
HETATM 4 C C12 V0S . . . F 6 107.191 141.945 144.354 1 150.7 ? C12 V0S 701 R 1 
HETATM 5 C C15 V0S . . . F 6 103.352 143.707 151.095 1 153.63 ? C15 V0S 701 R 1 
HETATM 6 C C17 V0S . . . F 6 102.816 142.776 153.481 1 155.65 ? C17 V0S 701 R 1 
HETATM 7 C C19 V0S . . . F 6 103.028 143.194 154.897 1 155.38 ? C19 V0S 701 R 1 
HETATM 8 C C20 V0S . . . F 6 103.67 144.413 155.069 1 155.32 ? C20 V0S 701 R 1 
HETATM 9 C C21 V0S . . . F 6 103.911 144.896 156.365 1 155.5 ? C21 V0S 701 R 1 
HETATM 10 C C24 V0S . . . F 6 102.851 142.908 157.299 1 155.83 ? C24 V0S 701 R 1 
HETATM 11 C C03 V0S . . . F 6 105.385 140.571 151.729 1 153.29 ? C03 V0S 701 R 1 
HETATM 12 C C04 V0S . . . F 6 105.788 141.846 152.175 1 152.25 ? C04 V0S 701 R 1 
HETATM 13 C C05 V0S . . . F 6 105.894 143.073 151.164 1 151.41 ? C05 V0S 701 R 1 
HETATM 14 C C07 V0S . . . F 6 104.58 143.258 148.895 1 151 ? C07 V0S 701 R 1 
HETATM 15 C C08 V0S . . . F 6 105.056 141.903 148.391 1 150.42 ? C08 V0S 701 R 1 
HETATM 16 C C09 V0S . . . F 6 105.242 141.879 146.869 1 150.55 ? C09 V0S 701 R 1 
HETATM 17 C C16 V0S . . . F 6 103.351 143.788 152.631 1 154.97 ? C16 V0S 701 R 1 
HETATM 18 C C23 V0S . . . F 6 103.503 144.134 157.469 1 155.85 ? C23 V0S 701 R 1 
HETATM 19 C C25 V0S . . . F 6 102.613 142.436 156.017 1 155.52 ? C25 V0S 701 R 1 
HETATM 20 C C29 V0S . . . F 6 106.072 142.05 153.544 1 152.66 ? C29 V0S 701 R 1 
HETATM 21 C C30 V0S . . . F 6 105.98 140.982 154.48 1 154.2 ? C30 V0S 701 R 1 
HETATM 22 C C31 V0S . . . F 6 106.275 141.193 156.013 1 156.24 ? C31 V0S 701 R 1 
HETATM 23 C C32 V0S . . . F 6 106.247 142.472 156.576 1 157.3 ? C32 V0S 701 R 1 
HETATM 24 C C33 V0S . . . F 6 106.491 142.631 157.947 1 158.05 ? C33 V0S 701 R 1 
HETATM 25 C C35 V0S . . . F 6 106.765 140.368 158.242 1 158.18 ? C35 V0S 701 R 1 
HETATM 26 C C36 V0S . . . F 6 106.531 140.114 156.883 1 157.48 ? C36 V0S 701 R 1 
HETATM 27 C C37 V0S . . . F 6 105.577 139.717 154.006 1 154.12 ? C37 V0S 701 R 1 
HETATM 28 C C38 V0S . . . F 6 105.287 139.512 152.639 1 154.02 ? C38 V0S 701 R 1 
HETATM 29 N N06 V0S . . . F 6 104.612 143.342 150.391 1 151.6 ? N06 V0S 701 R 1 
HETATM 30 N N11 V0S . . . F 6 106.292 142.937 144.939 1 150.73 ? N11 V0S 701 R 1 
HETATM 31 N N34 V0S . . . F 6 106.736 141.591 158.735 1 158.24 ? N34 V0S 701 R 1 
HETATM 32 O O28 V0S . . . F 6 102.339 143.917 150.512 1 154.27 ? O28 V0S 701 R 1 
HETATM 33 S S27 V0S . . . F 6 104.015 145.023 153.55 1 156.32 ? S27 V0S 701 R 1 
HETATM 34 CL CL18 V0S . . . F 6 102.028 141.269 152.937 1 160.07 ? CL18 V0S 701 R 1 
#
_model_server_stats.io_time_ms              75 
_model_server_stats.parse_time_ms           32 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           347 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           34 
#