data_6XDD # _model_server_result.job_id KU5_l-_sidDBOIyxvlqwqQ _model_server_result.datetime_utc '2024-11-05 08:24:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xdd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1001}' # _entry.id 6XDD # _exptl.entry_id 6XDD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 611.059 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(trans-4-aminocyclohexyl)amino]-N-(6-chloro-3-{[(2,5-difluorophenyl)sulfonyl]amino}-2-fluorophenyl)thieno[3,2-d]pyrimidine-7-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XDD _cell.length_a 47.201 _cell.length_b 156.816 _cell.length_c 157.766 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XDD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,C,E 2 1 B,D,F 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 177 A HIS 723 1_555 A N SEP 178 A SEP 724 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C SEP 178 A SEP 724 1_555 A N PHE 179 A PHE 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A C PHE 179 A PHE 725 1_555 A N SEP 180 A SEP 726 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C SEP 180 A SEP 726 1_555 A N ARG 181 A ARG 727 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 A C ARG 182 A ARG 728 1_555 A N SEP 183 A SEP 729 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 A C SEP 183 A SEP 729 1_555 A N GLY 184 A GLY 730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 B C HIS 177 B HIS 723 1_555 B N SEP 178 B SEP 724 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 B C SEP 178 B SEP 724 1_555 B N PHE 179 B PHE 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 B C PHE 179 B PHE 725 1_555 B N SEP 180 B SEP 726 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale10 B C SEP 180 B SEP 726 1_555 B N ARG 181 B ARG 727 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale11 B C ARG 182 B ARG 728 1_555 B N SEP 183 B SEP 729 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale12 B C SEP 183 B SEP 729 1_555 B N GLY 184 B GLY 730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? # _chem_comp.formula 'C25 H22 Cl F3 N6 O3 S2' _chem_comp.formula_weight 611.059 _chem_comp.id N97 _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(trans-4-aminocyclohexyl)amino]-N-(6-chloro-3-{[(2,5-difluorophenyl)sulfonyl]amino}-2-fluorophenyl)thieno[3,2-d]pyrimidine-7-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N26 C25 N97 doub 237 n y N26 C27 N97 sing 238 n y C25 N24 N97 sing 239 n y N31 C27 N97 sing 240 n n N31 C32 N97 sing 241 n n C34 C32 N97 sing 242 n n C34 C35 N97 sing 243 n n C27 C28 N97 doub 244 n y C39 C32 N97 sing 245 n n C39 C38 N97 sing 246 n n C36 C35 N97 sing 247 n n C36 C38 N97 sing 248 n n C36 N40 N97 sing 249 n n N24 C23 N97 doub 250 n y C28 C23 N97 sing 251 n y C28 S29 N97 sing 252 n y C23 C22 N97 sing 253 n y S29 C30 N97 sing 254 n y C22 C20 N97 sing 255 n n C22 C30 N97 doub 256 n y N19 C14 N97 sing 257 n n N19 C20 N97 sing 258 n n F41 C13 N97 sing 259 n n F7 C5 N97 sing 260 n n C14 C13 N97 doub 261 n y C14 C15 N97 sing 262 n y C20 O21 N97 doub 263 n n C13 C12 N97 sing 264 n y CL18 C15 N97 sing 265 n n C15 C16 N97 doub 266 n y C12 N11 N97 sing 267 n n C12 C17 N97 doub 268 n y N11 S8 N97 sing 269 n n C16 C17 N97 sing 270 n y C5 C6 N97 doub 271 n y C5 C4 N97 sing 272 n y C6 C1 N97 sing 273 n y O9 S8 N97 doub 274 n n S8 C4 N97 sing 275 n n S8 O10 N97 doub 276 n n C4 C3 N97 doub 277 n y C1 C2 N97 doub 278 n y C3 C2 N97 sing 279 n y C2 F42 N97 sing 280 n n C6 H1 N97 sing 281 n n C17 H2 N97 sing 282 n n C1 H3 N97 sing 283 n n C16 H4 N97 sing 284 n n C25 H5 N97 sing 285 n n C3 H6 N97 sing 286 n n C30 H7 N97 sing 287 n n C32 H8 N97 sing 288 n n C34 H9 N97 sing 289 n n C34 H10 N97 sing 290 n n C35 H11 N97 sing 291 n n C35 H12 N97 sing 292 n n C36 H13 N97 sing 293 n n C38 H14 N97 sing 294 n n C38 H15 N97 sing 295 n n C39 H16 N97 sing 296 n n C39 H17 N97 sing 297 n n N11 H18 N97 sing 298 n n N19 H19 N97 sing 299 n n N31 H20 N97 sing 300 n n N40 H21 N97 sing 301 n n N40 H22 N97 sing 302 n n # _atom_sites.entry_id 6XDD _atom_sites.fract_transf_matrix[1][1] 0.021186 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006377 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006339 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 N97 A 1 1001 1 N97 LIG . D 2 N97 B 1 1001 1 N97 LIG . E 3 HOH A 1 1101 26 HOH HOH . E 3 HOH A 2 1102 6 HOH HOH . E 3 HOH A 3 1103 20 HOH HOH . E 3 HOH A 4 1104 27 HOH HOH . E 3 HOH A 5 1105 25 HOH HOH . E 3 HOH A 6 1106 14 HOH HOH . E 3 HOH A 7 1107 4 HOH HOH . E 3 HOH A 8 1108 13 HOH HOH . E 3 HOH A 9 1109 2 HOH HOH . E 3 HOH A 10 1110 12 HOH HOH . E 3 HOH A 11 1111 18 HOH HOH . E 3 HOH A 12 1112 17 HOH HOH . E 3 HOH A 13 1113 24 HOH HOH . E 3 HOH A 14 1114 19 HOH HOH . E 3 HOH A 15 1115 9 HOH HOH . E 3 HOH A 16 1116 11 HOH HOH . E 3 HOH A 17 1117 5 HOH HOH . F 3 HOH B 1 1101 10 HOH HOH . F 3 HOH B 2 1102 15 HOH HOH . F 3 HOH B 3 1103 7 HOH HOH . F 3 HOH B 4 1104 30 HOH HOH . F 3 HOH B 5 1105 23 HOH HOH . F 3 HOH B 6 1106 1 HOH HOH . F 3 HOH B 7 1107 8 HOH HOH . F 3 HOH B 8 1108 28 HOH HOH . F 3 HOH B 9 1109 32 HOH HOH . F 3 HOH B 10 1110 31 HOH HOH . F 3 HOH B 11 1111 29 HOH HOH . F 3 HOH B 12 1112 21 HOH HOH . F 3 HOH B 13 1113 22 HOH HOH . F 3 HOH B 14 1114 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 N97 . . . D 2 -7.815 -36.151 55.945 1 83.4 ? C4 N97 1001 B 1 HETATM 2 C C5 N97 . . . D 2 -8.55 -35.022 55.666 1 84.43 ? C5 N97 1001 B 1 HETATM 3 C C6 N97 . . . D 2 -8.444 -33.913 56.488 1 83.43 ? C6 N97 1001 B 1 HETATM 4 C C13 N97 . . . D 2 -11.966 -37.159 55.063 1 60.24 ? C13 N97 1001 B 1 HETATM 5 C C15 N97 . . . D 2 -12.646 -37.395 57.341 1 51.16 ? C15 N97 1001 B 1 HETATM 6 C C17 N97 . . . D 2 -10.38 -37.828 56.754 1 60.98 ? C17 N97 1001 B 1 HETATM 7 C C20 N97 . . . D 2 -15.104 -37.357 54.919 1 55.76 ? C20 N97 1001 B 1 HETATM 8 C C22 N97 . . . D 2 -16.491 -36.888 54.806 1 52.75 ? C22 N97 1001 B 1 HETATM 9 C C28 N97 . . . D 2 -18.358 -35.482 55.189 1 53.8 ? C28 N97 1001 B 1 HETATM 10 C C1 N97 . . . D 2 -7.601 -33.937 57.582 1 81.84 ? C1 N97 1001 B 1 HETATM 11 C C12 N97 . . . D 2 -10.666 -37.533 55.423 1 65.5 ? C12 N97 1001 B 1 HETATM 12 C C14 N97 . . . D 2 -12.955 -37.092 56.03 1 51.94 ? C14 N97 1001 B 1 HETATM 13 C C16 N97 . . . D 2 -11.369 -37.752 57.711 1 55.84 ? C16 N97 1001 B 1 HETATM 14 C C2 N97 . . . D 2 -6.868 -35.078 57.85 1 83.11 ? C2 N97 1001 B 1 HETATM 15 C C23 N97 . . . D 2 -16.979 -35.649 55.401 1 45.85 ? C23 N97 1001 B 1 HETATM 16 C C25 N97 . . . D 2 -16.922 -33.647 56.539 1 45.73 ? C25 N97 1001 B 1 HETATM 17 C C27 N97 . . . D 2 -18.981 -34.319 55.712 1 47.29 ? C27 N97 1001 B 1 HETATM 18 C C3 N97 . . . D 2 -6.968 -36.198 57.039 1 81.15 ? C3 N97 1001 B 1 HETATM 19 C C30 N97 . . . D 2 -17.451 -37.618 54.196 1 52.02 ? C30 N97 1001 B 1 HETATM 20 C C32 N97 . . . D 2 -21.388 -34.839 54.989 1 49.93 ? C32 N97 1001 B 1 HETATM 21 C C34 N97 . . . D 2 -21.431 -34.59 53.471 1 48.38 ? C34 N97 1001 B 1 HETATM 22 C C35 N97 . . . D 2 -22.524 -35.458 52.847 1 50.11 ? C35 N97 1001 B 1 HETATM 23 C C36 N97 . . . D 2 -23.876 -35.117 53.481 1 52.56 ? C36 N97 1001 B 1 HETATM 24 C C38 N97 . . . D 2 -23.826 -35.344 54.996 1 54.08 ? C38 N97 1001 B 1 HETATM 25 C C39 N97 . . . D 2 -22.732 -34.471 55.603 1 52.29 ? C39 N97 1001 B 1 HETATM 26 F F41 N97 . . . D 2 -12.276 -36.862 53.791 1 64.61 ? F41 N97 1001 B 1 HETATM 27 F F42 N97 . . . D 2 -6.051 -35.087 58.917 1 87.35 ? F42 N97 1001 B 1 HETATM 28 F F7 N97 . . . D 2 -9.366 -35.037 54.584 1 82.12 ? F7 N97 1001 B 1 HETATM 29 N N11 N97 . . . D 2 -9.644 -37.597 54.458 1 72.43 ? N11 N97 1001 B 1 HETATM 30 N N19 N97 . . . D 2 -14.282 -36.724 55.777 1 50.77 ? N19 N97 1001 B 1 HETATM 31 N N24 N97 . . . D 2 -16.301 -34.706 56.084 1 45.34 ? N24 N97 1001 B 1 HETATM 32 N N26 N97 . . . D 2 -18.22 -33.459 56.38 1 46.68 ? N26 N97 1001 B 1 HETATM 33 N N31 N97 . . . D 2 -20.34 -34.017 55.606 1 48.61 ? N31 N97 1001 B 1 HETATM 34 N N40 N97 . . . D 2 -24.902 -36 52.923 1 60.19 ? N40 N97 1001 B 1 HETATM 35 O O10 N97 . . . D 2 -7.671 -38.675 55.597 1 86.97 ? O10 N97 1001 B 1 HETATM 36 O O21 N97 . . . D 2 -14.749 -38.35 54.308 1 59.67 ? O21 N97 1001 B 1 HETATM 37 O O9 N97 . . . D 2 -7.367 -37.113 53.661 1 88.64 ? O9 N97 1001 B 1 HETATM 38 S S29 N97 . . . D 2 -18.966 -36.862 54.281 1 53.55 ? S29 N97 1001 B 1 HETATM 39 S S8 N97 . . . D 2 -8.026 -37.511 54.852 1 82.79 ? S8 N97 1001 B 1 HETATM 40 CL CL18 N97 . . . D 2 -13.906 -37.298 58.518 1 53.14 ? CL18 N97 1001 B 1 # _model_server_stats.io_time_ms 77 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #