data_6XEF
#
_model_server_result.job_id            gxrjDN8M-R3Tku0aByn0Wg 
_model_server_result.datetime_utc      '2024-11-25 23:13:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xef 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    6XEF 
#
_exptl.entry_id    6XEF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6XEF 
_cell.length_a            88.384 
_cell.length_b            88.384 
_cell.length_c            104.879 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6XEF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O PRO 89 A PRO 89 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? 
metalc ? metalc2 A OD1 ASN 90 A ASN 90 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? 
metalc ? metalc3 D MG MG . A MG 403 1_555 G O HOH . A HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 351 n n 
C C2 TRS sing 352 n n 
C C3 TRS sing 353 n n 
C N TRS sing 354 n n 
C1 O1 TRS sing 355 n n 
C1 H11 TRS sing 356 n n 
C1 H12 TRS sing 357 n n 
C2 O2 TRS sing 358 n n 
C2 H21 TRS sing 359 n n 
C2 H22 TRS sing 360 n n 
C3 O3 TRS sing 361 n n 
C3 H31 TRS sing 362 n n 
C3 H32 TRS sing 363 n n 
N HN1 TRS sing 364 n n 
N HN2 TRS sing 365 n n 
N HN3 TRS sing 366 n n 
O1 HO1 TRS sing 367 n n 
O2 HO2 TRS sing 368 n n 
O3 HO3 TRS sing 369 n n 
#
_atom_sites.entry_id                     6XEF 
_atom_sites.fract_transf_matrix[1][1]    0.011314 
_atom_sites.fract_transf_matrix[1][2]    0.006532 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013065 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009535 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 TRS A 1 401 1 TRS TRS . 
C 3 MG A 1 402 2 MG MG . 
D 3 MG A 1 403 3 MG MG . 
E 4 VO4 A 1 404 4 VO4 VO4 . 
F 5 BEN A 1 405 5 BEN BEN . 
G 6 HOH A 1 501 49 HOH HOH . 
G 6 HOH A 2 502 123 HOH HOH . 
G 6 HOH A 3 503 28 HOH HOH . 
G 6 HOH A 4 504 44 HOH HOH . 
G 6 HOH A 5 505 86 HOH HOH . 
G 6 HOH A 6 506 85 HOH HOH . 
G 6 HOH A 7 507 57 HOH HOH . 
G 6 HOH A 8 508 117 HOH HOH . 
G 6 HOH A 9 509 99 HOH HOH . 
G 6 HOH A 10 510 77 HOH HOH . 
G 6 HOH A 11 511 50 HOH HOH . 
G 6 HOH A 12 512 36 HOH HOH . 
G 6 HOH A 13 513 71 HOH HOH . 
G 6 HOH A 14 514 79 HOH HOH . 
G 6 HOH A 15 515 131 HOH HOH . 
G 6 HOH A 16 516 76 HOH HOH . 
G 6 HOH A 17 517 3 HOH HOH . 
G 6 HOH A 18 518 111 HOH HOH . 
G 6 HOH A 19 519 75 HOH HOH . 
G 6 HOH A 20 520 48 HOH HOH . 
G 6 HOH A 21 521 135 HOH HOH . 
G 6 HOH A 22 522 12 HOH HOH . 
G 6 HOH A 23 523 22 HOH HOH . 
G 6 HOH A 24 524 130 HOH HOH . 
G 6 HOH A 25 525 70 HOH HOH . 
G 6 HOH A 26 526 93 HOH HOH . 
G 6 HOH A 27 527 136 HOH HOH . 
G 6 HOH A 28 528 119 HOH HOH . 
G 6 HOH A 29 529 20 HOH HOH . 
G 6 HOH A 30 530 63 HOH HOH . 
G 6 HOH A 31 531 116 HOH HOH . 
G 6 HOH A 32 532 19 HOH HOH . 
G 6 HOH A 33 533 13 HOH HOH . 
G 6 HOH A 34 534 41 HOH HOH . 
G 6 HOH A 35 535 6 HOH HOH . 
G 6 HOH A 36 536 64 HOH HOH . 
G 6 HOH A 37 537 72 HOH HOH . 
G 6 HOH A 38 538 52 HOH HOH . 
G 6 HOH A 39 539 67 HOH HOH . 
G 6 HOH A 40 540 59 HOH HOH . 
G 6 HOH A 41 541 54 HOH HOH . 
G 6 HOH A 42 542 98 HOH HOH . 
G 6 HOH A 43 543 34 HOH HOH . 
G 6 HOH A 44 544 8 HOH HOH . 
G 6 HOH A 45 545 97 HOH HOH . 
G 6 HOH A 46 546 133 HOH HOH . 
G 6 HOH A 47 547 5 HOH HOH . 
G 6 HOH A 48 548 101 HOH HOH . 
G 6 HOH A 49 549 23 HOH HOH . 
G 6 HOH A 50 550 107 HOH HOH . 
G 6 HOH A 51 551 80 HOH HOH . 
G 6 HOH A 52 552 95 HOH HOH . 
G 6 HOH A 53 553 11 HOH HOH . 
G 6 HOH A 54 554 58 HOH HOH . 
G 6 HOH A 55 555 4 HOH HOH . 
G 6 HOH A 56 556 96 HOH HOH . 
G 6 HOH A 57 557 16 HOH HOH . 
G 6 HOH A 58 558 88 HOH HOH . 
G 6 HOH A 59 559 14 HOH HOH . 
G 6 HOH A 60 560 27 HOH HOH . 
G 6 HOH A 61 561 90 HOH HOH . 
G 6 HOH A 62 562 104 HOH HOH . 
G 6 HOH A 63 563 89 HOH HOH . 
G 6 HOH A 64 564 15 HOH HOH . 
G 6 HOH A 65 565 82 HOH HOH . 
G 6 HOH A 66 566 39 HOH HOH . 
G 6 HOH A 67 567 42 HOH HOH . 
G 6 HOH A 68 568 2 HOH HOH . 
G 6 HOH A 69 569 84 HOH HOH . 
G 6 HOH A 70 570 47 HOH HOH . 
G 6 HOH A 71 571 55 HOH HOH . 
G 6 HOH A 72 572 10 HOH HOH . 
G 6 HOH A 73 573 31 HOH HOH . 
G 6 HOH A 74 574 40 HOH HOH . 
G 6 HOH A 75 575 35 HOH HOH . 
G 6 HOH A 76 576 68 HOH HOH . 
G 6 HOH A 77 577 134 HOH HOH . 
G 6 HOH A 78 578 78 HOH HOH . 
G 6 HOH A 79 579 112 HOH HOH . 
G 6 HOH A 80 580 122 HOH HOH . 
G 6 HOH A 81 581 121 HOH HOH . 
G 6 HOH A 82 582 1 HOH HOH . 
G 6 HOH A 83 583 118 HOH HOH . 
G 6 HOH A 84 584 100 HOH HOH . 
G 6 HOH A 85 585 24 HOH HOH . 
G 6 HOH A 86 586 74 HOH HOH . 
G 6 HOH A 87 587 46 HOH HOH . 
G 6 HOH A 88 588 60 HOH HOH . 
G 6 HOH A 89 589 33 HOH HOH . 
G 6 HOH A 90 590 29 HOH HOH . 
G 6 HOH A 91 591 26 HOH HOH . 
G 6 HOH A 92 592 128 HOH HOH . 
G 6 HOH A 93 593 21 HOH HOH . 
G 6 HOH A 94 594 7 HOH HOH . 
G 6 HOH A 95 595 38 HOH HOH . 
G 6 HOH A 96 596 81 HOH HOH . 
G 6 HOH A 97 597 43 HOH HOH . 
G 6 HOH A 98 598 56 HOH HOH . 
G 6 HOH A 99 599 132 HOH HOH . 
G 6 HOH A 100 600 51 HOH HOH . 
G 6 HOH A 101 601 114 HOH HOH . 
G 6 HOH A 102 602 62 HOH HOH . 
G 6 HOH A 103 603 69 HOH HOH . 
G 6 HOH A 104 604 17 HOH HOH . 
G 6 HOH A 105 605 66 HOH HOH . 
G 6 HOH A 106 606 30 HOH HOH . 
G 6 HOH A 107 607 32 HOH HOH . 
G 6 HOH A 108 608 102 HOH HOH . 
G 6 HOH A 109 609 18 HOH HOH . 
G 6 HOH A 110 610 94 HOH HOH . 
G 6 HOH A 111 611 106 HOH HOH . 
G 6 HOH A 112 612 110 HOH HOH . 
G 6 HOH A 113 613 45 HOH HOH . 
G 6 HOH A 114 614 25 HOH HOH . 
G 6 HOH A 115 615 137 HOH HOH . 
G 6 HOH A 116 616 113 HOH HOH . 
G 6 HOH A 117 617 124 HOH HOH . 
G 6 HOH A 118 618 126 HOH HOH . 
G 6 HOH A 119 619 92 HOH HOH . 
G 6 HOH A 120 620 115 HOH HOH . 
G 6 HOH A 121 621 91 HOH HOH . 
G 6 HOH A 122 622 103 HOH HOH . 
G 6 HOH A 123 623 127 HOH HOH . 
G 6 HOH A 124 624 73 HOH HOH . 
G 6 HOH A 125 625 53 HOH HOH . 
G 6 HOH A 126 626 83 HOH HOH . 
G 6 HOH A 127 627 108 HOH HOH . 
G 6 HOH A 128 628 87 HOH HOH . 
G 6 HOH A 129 629 61 HOH HOH . 
G 6 HOH A 130 630 105 HOH HOH . 
G 6 HOH A 131 631 65 HOH HOH . 
G 6 HOH A 132 632 109 HOH HOH . 
G 6 HOH A 133 633 129 HOH HOH . 
G 6 HOH A 134 634 120 HOH HOH . 
G 6 HOH A 135 635 9 HOH HOH . 
G 6 HOH A 136 636 37 HOH HOH . 
G 6 HOH A 137 637 125 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . B 2 -44.79 -2.066 22.234 1 55.9 ? C TRS 401 A 1 
HETATM 2 C C1 TRS . . . B 2 -43.715 -1.814 21.189 1 55.43 ? C1 TRS 401 A 1 
HETATM 3 C C2 TRS . . . B 2 -44.136 -2.539 23.522 1 65.7 ? C2 TRS 401 A 1 
HETATM 4 C C3 TRS . . . B 2 -45.695 -3.179 21.746 1 61.49 ? C3 TRS 401 A 1 
HETATM 5 N N TRS . . . B 2 -45.538 -0.834 22.434 1 61.51 ? N TRS 401 A 1 
HETATM 6 O O1 TRS . . . B 2 -43.028 -3.023 20.983 1 66.26 ? O1 TRS 401 A 1 
HETATM 7 O O2 TRS . . . B 2 -43.058 -1.688 23.781 1 60.01 ? O2 TRS 401 A 1 
HETATM 8 O O3 TRS . . . B 2 -46.109 -2.806 20.464 1 47.3 ? O3 TRS 401 A 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#