data_6XFV
#
_model_server_result.job_id            s3FVMQ6HF5G8M7K4kgYDqA 
_model_server_result.datetime_utc      '2024-11-22 20:47:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xfv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":500}' 
#
_entry.id    6XFV 
#
_exptl.entry_id    6XFV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              556.54 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-(4-{(3S,4S)-4-[4-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)phenyl]-3-methyl-3-phenylpyrrolidine-1-carbonyl}piperidin-1-yl)ethan-1-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6XFV 
_cell.length_a            97.867 
_cell.length_b            97.867 
_cell.length_c            130.355 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6XFV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C28 H30 F6 N2 O3' 
_chem_comp.formula_weight    556.54 
_chem_comp.id                V27 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-(4-{(3S,4S)-4-[4-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)phenyl]-3-methyl-3-phenylpyrrolidine-1-carbonyl}piperidin-1-yl)ethan-1-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F4 C2 V27 sing 358 n n 
F3 C2 V27 sing 359 n n 
C2 F1 V27 sing 360 n n 
C2 C5 V27 sing 361 n n 
O10 C5 V27 sing 362 n n 
C5 C12 V27 sing 363 n n 
C5 C6 V27 sing 364 n n 
C59 C58 V27 sing 365 n n 
C17 C12 V27 doub 366 n y 
C17 C19 V27 sing 367 n y 
F9 C6 V27 sing 368 n n 
C12 C13 V27 sing 369 n y 
C19 C21 V27 doub 370 n y 
C6 F8 V27 sing 371 n n 
C6 F7 V27 sing 372 n n 
C58 O63 V27 doub 373 n n 
C58 N57 V27 sing 374 n n 
O48 C47 V27 doub 375 n n 
C67 C64 V27 sing 376 n n 
C67 C49 V27 sing 377 n n 
C13 C15 V27 doub 378 n y 
C44 C22 V27 sing 379 n n 
C44 N43 V27 sing 380 n n 
C64 N57 V27 sing 381 n n 
C21 C15 V27 sing 382 n y 
C21 C22 V27 sing 383 n n 
N57 C54 V27 sing 384 n n 
C47 N43 V27 sing 385 n n 
C47 C49 V27 sing 386 n n 
C22 C24 V27 sing 387 n n 
N43 C40 V27 sing 388 n n 
C49 C51 V27 sing 389 n n 
C51 C54 V27 sing 390 n n 
C24 C40 V27 sing 391 n n 
C24 C29 V27 sing 392 n n 
C24 C25 V27 sing 393 n n 
C38 C29 V27 doub 394 n y 
C38 C36 V27 sing 395 n y 
C29 C30 V27 sing 396 n y 
C36 C34 V27 doub 397 n y 
C30 C32 V27 doub 398 n y 
C34 C32 V27 sing 399 n y 
O10 H1 V27 sing 400 n n 
C13 H2 V27 sing 401 n n 
C15 H3 V27 sing 402 n n 
C17 H4 V27 sing 403 n n 
C19 H5 V27 sing 404 n n 
C22 H6 V27 sing 405 n n 
C25 H7 V27 sing 406 n n 
C25 H8 V27 sing 407 n n 
C25 H9 V27 sing 408 n n 
C30 H10 V27 sing 409 n n 
C32 H11 V27 sing 410 n n 
C34 H12 V27 sing 411 n n 
C36 H13 V27 sing 412 n n 
C38 H14 V27 sing 413 n n 
C40 H15 V27 sing 414 n n 
C40 H16 V27 sing 415 n n 
C44 H17 V27 sing 416 n n 
C44 H18 V27 sing 417 n n 
C49 H19 V27 sing 418 n n 
C51 H20 V27 sing 419 n n 
C51 H21 V27 sing 420 n n 
C54 H22 V27 sing 421 n n 
C54 H23 V27 sing 422 n n 
C59 H24 V27 sing 423 n n 
C59 H25 V27 sing 424 n n 
C59 H26 V27 sing 425 n n 
C64 H27 V27 sing 426 n n 
C64 H28 V27 sing 427 n n 
C67 H29 V27 sing 428 n n 
C67 H30 V27 sing 429 n n 
#
_atom_sites.entry_id                     6XFV 
_atom_sites.fract_transf_matrix[1][1]    0.010218 
_atom_sites.fract_transf_matrix[1][2]    0.005899 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011799 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007671 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 V27 A 1 500 500 V27 Z7Y . 
D 2 V27 B 1 500 500 V27 Z7Y . 
E 3 HOH A 1 601 31 HOH HOH . 
E 3 HOH A 2 602 12 HOH HOH . 
E 3 HOH A 3 603 59 HOH HOH . 
E 3 HOH A 4 604 41 HOH HOH . 
E 3 HOH A 5 605 34 HOH HOH . 
E 3 HOH A 6 606 9 HOH HOH . 
E 3 HOH A 7 607 2 HOH HOH . 
E 3 HOH A 8 608 49 HOH HOH . 
E 3 HOH A 9 609 51 HOH HOH . 
E 3 HOH A 10 610 72 HOH HOH . 
E 3 HOH A 11 611 6 HOH HOH . 
E 3 HOH A 12 612 44 HOH HOH . 
E 3 HOH A 13 613 14 HOH HOH . 
E 3 HOH A 14 614 1 HOH HOH . 
E 3 HOH A 15 615 48 HOH HOH . 
E 3 HOH A 16 616 16 HOH HOH . 
E 3 HOH A 17 617 68 HOH HOH . 
E 3 HOH A 18 618 25 HOH HOH . 
E 3 HOH A 19 619 29 HOH HOH . 
E 3 HOH A 20 620 23 HOH HOH . 
E 3 HOH A 21 621 35 HOH HOH . 
E 3 HOH A 22 622 15 HOH HOH . 
E 3 HOH A 23 623 40 HOH HOH . 
E 3 HOH A 24 624 20 HOH HOH . 
E 3 HOH A 25 625 39 HOH HOH . 
E 3 HOH A 26 626 60 HOH HOH . 
E 3 HOH A 27 627 52 HOH HOH . 
E 3 HOH A 28 628 38 HOH HOH . 
E 3 HOH A 29 629 3 HOH HOH . 
E 3 HOH A 30 630 33 HOH HOH . 
E 3 HOH A 31 631 53 HOH HOH . 
E 3 HOH A 32 632 13 HOH HOH . 
E 3 HOH A 33 633 4 HOH HOH . 
E 3 HOH A 34 634 66 HOH HOH . 
E 3 HOH A 35 635 30 HOH HOH . 
E 3 HOH A 36 636 28 HOH HOH . 
E 3 HOH A 37 637 18 HOH HOH . 
E 3 HOH A 38 638 63 HOH HOH . 
F 3 HOH B 1 601 17 HOH HOH . 
F 3 HOH B 2 602 58 HOH HOH . 
F 3 HOH B 3 603 7 HOH HOH . 
F 3 HOH B 4 604 64 HOH HOH . 
F 3 HOH B 5 605 54 HOH HOH . 
F 3 HOH B 6 606 42 HOH HOH . 
F 3 HOH B 7 607 8 HOH HOH . 
F 3 HOH B 8 608 67 HOH HOH . 
F 3 HOH B 9 609 46 HOH HOH . 
F 3 HOH B 10 610 26 HOH HOH . 
F 3 HOH B 11 611 19 HOH HOH . 
F 3 HOH B 12 612 11 HOH HOH . 
F 3 HOH B 13 613 32 HOH HOH . 
F 3 HOH B 14 614 65 HOH HOH . 
F 3 HOH B 15 615 62 HOH HOH . 
F 3 HOH B 16 616 45 HOH HOH . 
F 3 HOH B 17 617 21 HOH HOH . 
F 3 HOH B 18 618 24 HOH HOH . 
F 3 HOH B 19 619 22 HOH HOH . 
F 3 HOH B 20 620 56 HOH HOH . 
F 3 HOH B 21 621 37 HOH HOH . 
F 3 HOH B 22 622 27 HOH HOH . 
F 3 HOH B 23 623 43 HOH HOH . 
F 3 HOH B 24 624 10 HOH HOH . 
F 3 HOH B 25 625 5 HOH HOH . 
F 3 HOH B 26 626 47 HOH HOH . 
F 3 HOH B 27 627 55 HOH HOH . 
F 3 HOH B 28 628 61 HOH HOH . 
F 3 HOH B 29 629 57 HOH HOH . 
F 3 HOH B 30 630 69 HOH HOH . 
F 3 HOH B 31 631 73 HOH HOH . 
F 3 HOH B 32 632 50 HOH HOH . 
F 3 HOH B 33 633 36 HOH HOH . 
F 3 HOH B 34 634 71 HOH HOH . 
F 3 HOH B 35 635 70 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O10 V27 . . . D 2 -30.505 -21.302 30.117 1 96.13 ? O10 V27 500 B 1 
HETATM 2 C C2 V27 . . . D 2 -30.583 -19.148 29.089 1 95.79 ? C2 V27 500 B 1 
HETATM 3 C C5 V27 . . . D 2 -30.464 -19.912 30.437 1 96.13 ? C5 V27 500 B 1 
HETATM 4 C C6 V27 . . . D 2 -31.659 -19.67 31.401 1 96.1 ? C6 V27 500 B 1 
HETATM 5 C C12 V27 . . . D 2 -29.105 -19.616 31.114 1 96.24 ? C12 V27 500 B 1 
HETATM 6 C C13 V27 . . . D 2 -28.947 -18.51 31.937 1 96.21 ? C13 V27 500 B 1 
HETATM 7 C C15 V27 . . . D 2 -27.71 -18.18 32.454 1 96.25 ? C15 V27 500 B 1 
HETATM 8 C C17 V27 . . . D 2 -27.986 -20.399 30.857 1 96.29 ? C17 V27 500 B 1 
HETATM 9 C C19 V27 . . . D 2 -26.754 -20.07 31.381 1 96.33 ? C19 V27 500 B 1 
HETATM 10 C C21 V27 . . . D 2 -26.591 -18.948 32.176 1 96.49 ? C21 V27 500 B 1 
HETATM 11 C C22 V27 . . . D 2 -25.216 -18.546 32.667 1 96.69 ? C22 V27 500 B 1 
HETATM 12 C C24 V27 . . . D 2 -24.89 -18.745 34.185 1 96.58 ? C24 V27 500 B 1 
HETATM 13 C C25 V27 . . . D 2 -25.491 -17.616 35.039 1 96.36 ? C25 V27 500 B 1 
HETATM 14 F F1 V27 . . . D 2 -30.56 -17.832 29.263 1 95.7 ? F1 V27 500 B 1 
HETATM 15 F F3 V27 . . . D 2 -31.711 -19.442 28.454 1 95.55 ? F3 V27 500 B 1 
HETATM 16 F F4 V27 . . . D 2 -29.589 -19.445 28.264 1 95.84 ? F4 V27 500 B 1 
HETATM 17 F F7 V27 . . . D 2 -31.488 -20.303 32.556 1 96.01 ? F7 V27 500 B 1 
HETATM 18 F F8 V27 . . . D 2 -31.838 -18.385 31.689 1 96.06 ? F8 V27 500 B 1 
HETATM 19 F F9 V27 . . . D 2 -32.8 -20.113 30.879 1 96.18 ? F9 V27 500 B 1 
HETATM 20 C C29 V27 . . . D 2 -25.434 -20.11 34.673 1 96.52 ? C29 V27 500 B 1 
HETATM 21 C C30 V27 . . . D 2 -26.755 -20.248 35.083 1 96.51 ? C30 V27 500 B 1 
HETATM 22 C C32 V27 . . . D 2 -27.267 -21.483 35.436 1 96.6 ? C32 V27 500 B 1 
HETATM 23 C C34 V27 . . . D 2 -26.467 -22.601 35.396 1 96.59 ? C34 V27 500 B 1 
HETATM 24 C C36 V27 . . . D 2 -25.151 -22.482 35.018 1 96.42 ? C36 V27 500 B 1 
HETATM 25 C C38 V27 . . . D 2 -24.634 -21.248 34.667 1 96.48 ? C38 V27 500 B 1 
HETATM 26 C C40 V27 . . . D 2 -23.351 -18.63 34.2 1 96.87 ? C40 V27 500 B 1 
HETATM 27 N N43 V27 . . . D 2 -22.948 -19.143 32.888 1 97.1 ? N43 V27 500 B 1 
HETATM 28 C C44 V27 . . . D 2 -24.059 -19.235 31.95 1 96.9 ? C44 V27 500 B 1 
HETATM 29 C C47 V27 . . . D 2 -21.753 -19.688 32.601 1 97.45 ? C47 V27 500 B 1 
HETATM 30 O O48 V27 . . . D 2 -21.654 -20.602 31.807 1 97.3 ? O48 V27 500 B 1 
HETATM 31 C C49 V27 . . . D 2 -20.522 -18.901 32.997 1 97.97 ? C49 V27 500 B 1 
HETATM 32 C C51 V27 . . . D 2 -19.353 -19.858 33.277 1 98.24 ? C51 V27 500 B 1 
HETATM 33 C C54 V27 . . . D 2 -18.072 -19.049 33.555 1 98.53 ? C54 V27 500 B 1 
HETATM 34 N N57 V27 . . . D 2 -17.753 -18.128 32.452 1 98.71 ? N57 V27 500 B 1 
HETATM 35 C C58 V27 . . . D 2 -16.549 -18.101 31.804 1 99.01 ? C58 V27 500 B 1 
HETATM 36 C C59 V27 . . . D 2 -16.324 -17.06 30.745 1 99.04 ? C59 V27 500 B 1 
HETATM 37 O O63 V27 . . . D 2 -15.679 -18.905 32.079 1 99.25 ? O63 V27 500 B 1 
HETATM 38 C C64 V27 . . . D 2 -18.865 -17.21 32.172 1 98.48 ? C64 V27 500 B 1 
HETATM 39 C C67 V27 . . . D 2 -20.146 -17.965 31.836 1 98.24 ? C67 V27 500 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           39 
#