data_6XG4
#
_model_server_result.job_id            n1MqRAnME8UtQl12fdpyRQ 
_model_server_result.datetime_utc      '2024-11-24 07:47:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xg4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    6XG4 
#
_exptl.entry_id    6XG4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6XG4 
_cell.length_a            61.548 
_cell.length_b            61.548 
_cell.length_c            104.661 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6XG4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 250 n n 
PA O2A NDP sing 251 n n 
PA O5B NDP sing 252 n n 
PA O3 NDP sing 253 n n 
O2A HOA2 NDP sing 254 n n 
O5B C5B NDP sing 255 n n 
C5B C4B NDP sing 256 n n 
C5B H51A NDP sing 257 n n 
C5B H52A NDP sing 258 n n 
C4B O4B NDP sing 259 n n 
C4B C3B NDP sing 260 n n 
C4B H4B NDP sing 261 n n 
O4B C1B NDP sing 262 n n 
C3B O3B NDP sing 263 n n 
C3B C2B NDP sing 264 n n 
C3B H3B NDP sing 265 n n 
O3B HO3A NDP sing 266 n n 
C2B O2B NDP sing 267 n n 
C2B C1B NDP sing 268 n n 
C2B H2B NDP sing 269 n n 
O2B P2B NDP sing 270 n n 
C1B N9A NDP sing 271 n n 
C1B H1B NDP sing 272 n n 
N9A C8A NDP sing 273 n y 
N9A C4A NDP sing 274 n y 
C8A N7A NDP doub 275 n y 
C8A H8A NDP sing 276 n n 
N7A C5A NDP sing 277 n y 
C5A C6A NDP sing 278 n y 
C5A C4A NDP doub 279 n y 
C6A N6A NDP sing 280 n n 
C6A N1A NDP doub 281 n y 
N6A H61A NDP sing 282 n n 
N6A H62A NDP sing 283 n n 
N1A C2A NDP sing 284 n y 
C2A N3A NDP doub 285 n y 
C2A H2A NDP sing 286 n n 
N3A C4A NDP sing 287 n y 
O3 PN NDP sing 288 n n 
PN O1N NDP doub 289 n n 
PN O2N NDP sing 290 n n 
PN O5D NDP sing 291 n n 
O2N H21N NDP sing 292 n n 
O5D C5D NDP sing 293 n n 
C5D C4D NDP sing 294 n n 
C5D H51N NDP sing 295 n n 
C5D H52N NDP sing 296 n n 
C4D O4D NDP sing 297 n n 
C4D C3D NDP sing 298 n n 
C4D H4D NDP sing 299 n n 
O4D C1D NDP sing 300 n n 
C3D O3D NDP sing 301 n n 
C3D C2D NDP sing 302 n n 
C3D H3D NDP sing 303 n n 
O3D HO3N NDP sing 304 n n 
C2D O2D NDP sing 305 n n 
C2D C1D NDP sing 306 n n 
C2D H2D NDP sing 307 n n 
O2D HO2N NDP sing 308 n n 
C1D N1N NDP sing 309 n n 
C1D H1D NDP sing 310 n n 
N1N C2N NDP sing 311 n n 
N1N C6N NDP sing 312 n n 
C2N C3N NDP doub 313 n n 
C2N H2N NDP sing 314 n n 
C3N C7N NDP sing 315 n n 
C3N C4N NDP sing 316 n n 
C7N O7N NDP doub 317 n n 
C7N N7N NDP sing 318 n n 
N7N H71N NDP sing 319 n n 
N7N H72N NDP sing 320 n n 
C4N C5N NDP sing 321 n n 
C4N H41N NDP sing 322 n n 
C4N H42N NDP sing 323 n n 
C5N C6N NDP doub 324 n n 
C5N H5N NDP sing 325 n n 
C6N H6N NDP sing 326 n n 
P2B O1X NDP doub 327 n n 
P2B O2X NDP sing 328 n n 
P2B O3X NDP sing 329 n n 
O2X HOP2 NDP sing 330 n n 
O3X HOP3 NDP sing 331 n n 
#
_atom_sites.entry_id                     6XG4 
_atom_sites.fract_transf_matrix[1][1]    0.016247 
_atom_sites.fract_transf_matrix[1][2]    0.00938 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018761 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009555 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NDP A 1 301 301 NDP NDP . 
C 3 GOL A 1 302 501 GOL GOL . 
D 4 TOP A 1 303 601 TOP TOP . 
E 5 CL A 1 304 2 CL CL . 
F 6 HOH A 1 401 38 HOH HOH . 
F 6 HOH A 2 402 13 HOH HOH . 
F 6 HOH A 3 403 118 HOH HOH . 
F 6 HOH A 4 404 52 HOH HOH . 
F 6 HOH A 5 405 21 HOH HOH . 
F 6 HOH A 6 406 81 HOH HOH . 
F 6 HOH A 7 407 126 HOH HOH . 
F 6 HOH A 8 408 71 HOH HOH . 
F 6 HOH A 9 409 41 HOH HOH . 
F 6 HOH A 10 410 116 HOH HOH . 
F 6 HOH A 11 411 87 HOH HOH . 
F 6 HOH A 12 412 26 HOH HOH . 
F 6 HOH A 13 413 101 HOH HOH . 
F 6 HOH A 14 414 83 HOH HOH . 
F 6 HOH A 15 415 85 HOH HOH . 
F 6 HOH A 16 416 121 HOH HOH . 
F 6 HOH A 17 417 110 HOH HOH . 
F 6 HOH A 18 418 34 HOH HOH . 
F 6 HOH A 19 419 16 HOH HOH . 
F 6 HOH A 20 420 127 HOH HOH . 
F 6 HOH A 21 421 17 HOH HOH . 
F 6 HOH A 22 422 35 HOH HOH . 
F 6 HOH A 23 423 89 HOH HOH . 
F 6 HOH A 24 424 114 HOH HOH . 
F 6 HOH A 25 425 88 HOH HOH . 
F 6 HOH A 26 426 124 HOH HOH . 
F 6 HOH A 27 427 12 HOH HOH . 
F 6 HOH A 28 428 46 HOH HOH . 
F 6 HOH A 29 429 15 HOH HOH . 
F 6 HOH A 30 430 70 HOH HOH . 
F 6 HOH A 31 431 32 HOH HOH . 
F 6 HOH A 32 432 97 HOH HOH . 
F 6 HOH A 33 433 10 HOH HOH . 
F 6 HOH A 34 434 119 HOH HOH . 
F 6 HOH A 35 435 102 HOH HOH . 
F 6 HOH A 36 436 28 HOH HOH . 
F 6 HOH A 37 437 60 HOH HOH . 
F 6 HOH A 38 438 40 HOH HOH . 
F 6 HOH A 39 439 36 HOH HOH . 
F 6 HOH A 40 440 23 HOH HOH . 
F 6 HOH A 41 441 48 HOH HOH . 
F 6 HOH A 42 442 94 HOH HOH . 
F 6 HOH A 43 443 117 HOH HOH . 
F 6 HOH A 44 444 4 HOH HOH . 
F 6 HOH A 45 445 72 HOH HOH . 
F 6 HOH A 46 446 45 HOH HOH . 
F 6 HOH A 47 447 29 HOH HOH . 
F 6 HOH A 48 448 1 HOH HOH . 
F 6 HOH A 49 449 75 HOH HOH . 
F 6 HOH A 50 450 69 HOH HOH . 
F 6 HOH A 51 451 44 HOH HOH . 
F 6 HOH A 52 452 91 HOH HOH . 
F 6 HOH A 53 453 120 HOH HOH . 
F 6 HOH A 54 454 96 HOH HOH . 
F 6 HOH A 55 455 59 HOH HOH . 
F 6 HOH A 56 456 67 HOH HOH . 
F 6 HOH A 57 457 33 HOH HOH . 
F 6 HOH A 58 458 22 HOH HOH . 
F 6 HOH A 59 459 63 HOH HOH . 
F 6 HOH A 60 460 54 HOH HOH . 
F 6 HOH A 61 461 37 HOH HOH . 
F 6 HOH A 62 462 9 HOH HOH . 
F 6 HOH A 63 463 79 HOH HOH . 
F 6 HOH A 64 464 113 HOH HOH . 
F 6 HOH A 65 465 131 HOH HOH . 
F 6 HOH A 66 466 111 HOH HOH . 
F 6 HOH A 67 467 129 HOH HOH . 
F 6 HOH A 68 468 14 HOH HOH . 
F 6 HOH A 69 469 55 HOH HOH . 
F 6 HOH A 70 470 66 HOH HOH . 
F 6 HOH A 71 471 24 HOH HOH . 
F 6 HOH A 72 472 8 HOH HOH . 
F 6 HOH A 73 473 43 HOH HOH . 
F 6 HOH A 74 474 95 HOH HOH . 
F 6 HOH A 75 475 105 HOH HOH . 
F 6 HOH A 76 476 2 HOH HOH . 
F 6 HOH A 77 477 115 HOH HOH . 
F 6 HOH A 78 478 90 HOH HOH . 
F 6 HOH A 79 479 130 HOH HOH . 
F 6 HOH A 80 480 47 HOH HOH . 
F 6 HOH A 81 481 98 HOH HOH . 
F 6 HOH A 82 482 3 HOH HOH . 
F 6 HOH A 83 483 6 HOH HOH . 
F 6 HOH A 84 484 92 HOH HOH . 
F 6 HOH A 85 485 58 HOH HOH . 
F 6 HOH A 86 486 30 HOH HOH . 
F 6 HOH A 87 487 68 HOH HOH . 
F 6 HOH A 88 488 74 HOH HOH . 
F 6 HOH A 89 489 93 HOH HOH . 
F 6 HOH A 90 490 109 HOH HOH . 
F 6 HOH A 91 491 100 HOH HOH . 
F 6 HOH A 92 492 77 HOH HOH . 
F 6 HOH A 93 493 108 HOH HOH . 
F 6 HOH A 94 494 62 HOH HOH . 
F 6 HOH A 95 495 82 HOH HOH . 
F 6 HOH A 96 496 99 HOH HOH . 
F 6 HOH A 97 497 107 HOH HOH . 
F 6 HOH A 98 498 61 HOH HOH . 
F 6 HOH A 99 499 19 HOH HOH . 
F 6 HOH A 100 500 25 HOH HOH . 
F 6 HOH A 101 501 104 HOH HOH . 
F 6 HOH A 102 502 103 HOH HOH . 
F 6 HOH A 103 503 39 HOH HOH . 
F 6 HOH A 104 504 7 HOH HOH . 
F 6 HOH A 105 505 18 HOH HOH . 
F 6 HOH A 106 506 132 HOH HOH . 
F 6 HOH A 107 507 78 HOH HOH . 
F 6 HOH A 108 508 112 HOH HOH . 
F 6 HOH A 109 509 31 HOH HOH . 
F 6 HOH A 110 510 11 HOH HOH . 
F 6 HOH A 111 511 80 HOH HOH . 
F 6 HOH A 112 512 123 HOH HOH . 
F 6 HOH A 113 513 20 HOH HOH . 
F 6 HOH A 114 514 84 HOH HOH . 
F 6 HOH A 115 515 106 HOH HOH . 
F 6 HOH A 116 516 27 HOH HOH . 
F 6 HOH A 117 517 51 HOH HOH . 
F 6 HOH A 118 518 49 HOH HOH . 
F 6 HOH A 119 519 65 HOH HOH . 
F 6 HOH A 120 520 128 HOH HOH . 
F 6 HOH A 121 521 76 HOH HOH . 
F 6 HOH A 122 522 86 HOH HOH . 
F 6 HOH A 123 523 50 HOH HOH . 
F 6 HOH A 124 524 53 HOH HOH . 
F 6 HOH A 125 525 64 HOH HOH . 
F 6 HOH A 126 526 42 HOH HOH . 
F 6 HOH A 127 527 57 HOH HOH . 
F 6 HOH A 128 528 56 HOH HOH . 
F 6 HOH A 129 529 73 HOH HOH . 
F 6 HOH A 130 530 5 HOH HOH . 
F 6 HOH A 131 531 125 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . B 2 -16.699 27.864 9.378 1 25.47 ? PA NDP 301 A 1 
HETATM 2 O O1A NDP . . . B 2 -15.471 28.374 10.074 1 24.03 ? O1A NDP 301 A 1 
HETATM 3 O O2A NDP . . . B 2 -17.174 26.46 9.598 1 25.66 ? O2A NDP 301 A 1 
HETATM 4 O O5B NDP . . . B 2 -16.561 28.15 7.807 1 27.2 ? O5B NDP 301 A 1 
HETATM 5 C C5B NDP . . . B 2 -17.785 28.289 7.021 1 29.57 ? C5B NDP 301 A 1 
HETATM 6 C C4B NDP . . . B 2 -17.486 28.069 5.558 1 31.16 ? C4B NDP 301 A 1 
HETATM 7 O O4B NDP . . . B 2 -16.958 26.732 5.361 1 31.07 ? O4B NDP 301 A 1 
HETATM 8 C C3B NDP . . . B 2 -18.684 28.129 4.603 1 33.98 ? C3B NDP 301 A 1 
HETATM 9 O O3B NDP . . . B 2 -19.02 29.462 4.238 1 35.21 ? O3B NDP 301 A 1 
HETATM 10 C C2B NDP . . . B 2 -18.147 27.361 3.409 1 35.03 ? C2B NDP 301 A 1 
HETATM 11 O O2B NDP . . . B 2 -17.234 28.145 2.668 1 35.24 ? O2B NDP 301 A 1 
HETATM 12 C C1B NDP . . . B 2 -17.274 26.298 4.056 1 33.31 ? C1B NDP 301 A 1 
HETATM 13 N N9A NDP . . . B 2 -17.893 24.987 4.106 1 34.49 ? N9A NDP 301 A 1 
HETATM 14 C C8A NDP . . . B 2 -18.366 24.319 5.203 1 33.98 ? C8A NDP 301 A 1 
HETATM 15 N N7A NDP . . . B 2 -18.812 23.122 4.926 1 35.8 ? N7A NDP 301 A 1 
HETATM 16 C C5A NDP . . . B 2 -18.616 22.99 3.558 1 37.64 ? C5A NDP 301 A 1 
HETATM 17 C C6A NDP . . . B 2 -18.888 21.941 2.659 1 40.31 ? C6A NDP 301 A 1 
HETATM 18 N N6A NDP . . . B 2 -19.409 20.778 3.036 1 41.75 ? N6A NDP 301 A 1 
HETATM 19 N N1A NDP . . . B 2 -18.551 22.123 1.358 1 41.82 ? N1A NDP 301 A 1 
HETATM 20 C C2A NDP . . . B 2 -18.015 23.3 1.001 1 40.67 ? C2A NDP 301 A 1 
HETATM 21 N N3A NDP . . . B 2 -17.715 24.354 1.761 1 38.27 ? N3A NDP 301 A 1 
HETATM 22 C C4A NDP . . . B 2 -18.045 24.134 3.042 1 36.77 ? C4A NDP 301 A 1 
HETATM 23 O O3 NDP . . . B 2 -17.868 28.887 9.787 1 26.25 ? O3 NDP 301 A 1 
HETATM 24 P PN NDP . . . B 2 -18.72 29.307 11.081 1 26.08 ? PN NDP 301 A 1 
HETATM 25 O O1N NDP . . . B 2 -19.751 28.244 11.264 1 27.21 ? O1N NDP 301 A 1 
HETATM 26 O O2N NDP . . . B 2 -19.13 30.73 10.87 1 27.33 ? O2N NDP 301 A 1 
HETATM 27 O O5D NDP . . . B 2 -17.69 29.233 12.311 1 23.82 ? O5D NDP 301 A 1 
HETATM 28 C C5D NDP . . . B 2 -16.633 30.236 12.426 1 22.93 ? C5D NDP 301 A 1 
HETATM 29 C C4D NDP . . . B 2 -16.551 30.699 13.856 1 22.13 ? C4D NDP 301 A 1 
HETATM 30 O O4D NDP . . . B 2 -15.971 29.63 14.635 1 20.62 ? O4D NDP 301 A 1 
HETATM 31 C C3D NDP . . . B 2 -15.697 31.943 14.133 1 22.1 ? C3D NDP 301 A 1 
HETATM 32 O O3D NDP . . . B 2 -16.324 32.844 15.037 1 23.02 ? O3D NDP 301 A 1 
HETATM 33 C C2D NDP . . . B 2 -14.471 31.351 14.803 1 20.46 ? C2D NDP 301 A 1 
HETATM 34 O O2D NDP . . . B 2 -13.906 32.325 15.654 1 20.62 ? O2D NDP 301 A 1 
HETATM 35 C C1D NDP . . . B 2 -15.056 30.167 15.555 1 19.69 ? C1D NDP 301 A 1 
HETATM 36 N N1N NDP . . . B 2 -14.059 29.114 15.903 1 18.35 ? N1N NDP 301 A 1 
HETATM 37 C C2N NDP . . . B 2 -13.716 28.882 17.206 1 17.59 ? C2N NDP 301 A 1 
HETATM 38 C C3N NDP . . . B 2 -13.101 27.71 17.593 1 16.9 ? C3N NDP 301 A 1 
HETATM 39 C C7N NDP . . . B 2 -13.143 27.278 19.004 1 16.48 ? C7N NDP 301 A 1 
HETATM 40 O O7N NDP . . . B 2 -12.558 26.24 19.335 1 16.17 ? O7N NDP 301 A 1 
HETATM 41 N N7N NDP . . . B 2 -13.809 28.008 19.896 1 16.73 ? N7N NDP 301 A 1 
HETATM 42 C C4N NDP . . . B 2 -12.395 26.918 16.53 1 17.06 ? C4N NDP 301 A 1 
HETATM 43 C C5N NDP . . . B 2 -12.483 27.528 15.19 1 17.68 ? C5N NDP 301 A 1 
HETATM 44 C C6N NDP . . . B 2 -13.466 28.362 14.908 1 18.3 ? C6N NDP 301 A 1 
HETATM 45 P P2B NDP . . . B 2 -17.784 28.937 1.406 1 37.86 ? P2B NDP 301 A 1 
HETATM 46 O O1X NDP . . . B 2 -16.525 29.108 0.602 1 37.85 ? O1X NDP 301 A 1 
HETATM 47 O O2X NDP . . . B 2 -18.848 28.129 0.681 1 40.36 ? O2X NDP 301 A 1 
HETATM 48 O O3X NDP . . . B 2 -18.301 30.24 1.961 1 38.04 ? O3X NDP 301 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           226 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           48 
#